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Final Programme

Tuesday 2nd December
15:00 - 17:30
Registration
Exhibition set-up
Poster presentations set-up
SESSION I - Opening Lectures
17:30 - 17:45 Welcome note and official addresses
17:45 - 18:15 Opening Lecture: Proteomics applications for understanding diseases
Lord Sainsbury of Turville, British Minister for Science and Innovation
18:15 - 19:00 Opening Lecture: Setting the standards: Quality control in the endoplasmic reticulum
Ari Helenius, ETHZ, Institute of Biochemistry, Zurich, Switzerland
19:00 - 19:45 Opening Lecture: Dealing with the modulation of cell function - post translational issues and challenges: stability, lability and complexity
Alma L. Burlingame, UCSF, Pharmaceutical Chemistry, San Francisco, USA
19:45 - 20:30 WELCOME RECEPTION
Wednesday 3rd December
7:45 - 8:30 Registration / Coffee
SESSION II - Applications in Biology
8:30 - 9:10 Invited Lecture: TOR signalling and control of cell growth
Michael N. Hall, Biozentrum, University of Basel, Switzerland
9:10 - 9:50 Invited Lecture: SCF ubiquitin protein ligases and cancer
Wilhelm Krek, ETHZ, Institute of Cell Biology, Zurich, Switzerland
9:50 - 10:10 Oral Presentation: Tracking the Rapamycin Sensitivity of Phosphorylation Sites of the Saccharomyces cerevisiae Nitrogen Permease Reactivator Protein NPR1 by Stable Isotope Labelling and Mass Spectrometry
Paul Jenoe, Biozentrum, University of Basel, Switzerland
10:10 - 10:30 Oral Presentation: Characterization of a novel human nucleolar exonuclease
Yohann Couté, Centre de Génétique Moléculaire et Cellulaire, Villeurbanne, France
10:30 - 11:00 COFFEE BREAK
SESSION III - Sample preparation / Bioinformatics
11:00 - 11:40

Invited Lecture: Serum Peptide Signatures of Solid Tumor Cancers
Josep Villanueva (Paul Tempst), Sloan-Kettering Institute, Molecular Biology, New York, USA

11:40 - 12:00

Oral Presentation: Gel-free proteomics of membrane proteins
Simone B. Scheurer, ETHZ, Institute of Pharmaceutical Sciences, Zurich, Switzerland

12:00 - 12:20 Oral Presentation: Utility of peptidomics technologies for phenotyping of disease models
Peter Schulz-Knappe, BioVisioN AG, Hannover, Germany
12:20 - 13:00

Invited Lecture: Shaping biological knowledge
Frédérique Lisacek, GeneBio, Geneva, Switzerland

13:00 - 14:30 LUNCH BREAK
14:30 - 16:00 POSTER SESSION I & COFFEE
Lecture Rooms 1 & 2 / 2nd floor
Tutorial Lectures No 1 - 4
13:30 - 14:00 Beckman Coulter Lecture: 2D liquid separation and mapping method for sample comparison, featuring ProteomeLab PF 2D
Guillaume Paton, Beckman Coulter
14:00 - 14:30

Ciphergen Biosystems Lecture: A novel multi-biomarker panel for diagnosis of early stage ovarian cancer [Abstract]
Steve Cleverley, Ciphergen Europe

14:30 - 15:00 Dionex Tutorial Lecture: The Impact of Monolithic Capillary Columns in LC/MS Proteomics
Jean-Pierre Chervet, LC Packings - A Dionex Company, The Netherlands
15:00 - 15:30 Tecan Tutorial Lecture: The Pro Team Digest Family: An Optimised Environment for Fully Automated In-Gel and In-Solution Digestion of Proteins [Abstract]
Mikkel Nissum, Tecan Switzerland AG
SESSION IV - Microbial Proteomics
16:00 - 16:40

Invited Lecture: Protein Expression and Stability during the Caulobacter crescentus Cell Cycle
Urs Jenal, Biozentrum, University of Basel, Switzerland

16:40 - 17:20

Invited Lecture: Proteomics meets productivity !
Isabelle Maillet, Roche AG, Switzerland

17:30 - 18:00 SPS General Council Meeting
17:30 - 18:30 POSTER SESSION II
20:00 GALA DINNER
Thursday 4th December
Lecture Room 1 / 2nd floor
Tutorial Lecture No 5
8:25 - 8:55 Agilent Lecture: Agilent Technologies has expanded the product portfolio for Lifescience applications [Abstract]
Christian Sauber,Agilent Technologies
SESSION V - Biomarkers
9:00 - 9:40 Invited Lecture: Proteomic Biomarkers: From Research to the Clinical Lab
Gordon R. Whiteley, National Cancer Institute at Frederick, Gaithersburg, USA
9:40 - 10:20 Invited Lecture: MAPPs - MHC associated peptide proteomics
Gerrit Buurman (Anne Vogt), Roche AG, Switzerland
10:20 - 10:40

Oral Presentation: Differential proteomic analysis of chronic myelogenous leukemia K562 cell line following the photodynamic treatment
Z. Hrkal, Department of Cellular Biochemistry, Institute of Hematology and Blood Transfusion, Prague, Czech Republic

10:40 - 11:10 COFFEE BREAK
11:10 - 11:50 Invited Lecture: MALDI MS Imaging in Biomedical Research
Markus M. Stoeckli, Novartis AG, Switzerland
11:50 - 12:10

Oral Presentation: Solubility-based protein analysis followed by tandem mass spectrometry with MALDI ionization
Alexander Scherl, Biomedical Proteomics Research Group, Geneva University Hospital, Geneva, Switzerland

12:10 - 13:30 LUNCH BREAK
13:30 - 15:45 POSTER SESSION III & COFFEE
Lecture Rooms 1 & 2 / 2nd floor
Tutorial Lectures No 6 - 9
12:30 - 13:00 Bruker Daltonics: Advanced proteomics workflows providing detailed structural protein information, including LC-ESI/MALDI and Top-Down analysis
Detlev Suckau, Bruker Daltonik GmbH, Germany
13:00 - 13:30 Applied Biosystems Lecture: New Q-Star® Proteomics Discovery : Workflows and Applications
Pierre S. Paroutaud, Applied Biosystems, Europe
13:30 - 14:00 PerkinElmer Lecture: Driving high throughput proteomics using orthogonal MALDI O-TOF mass spectrometry [Abstract]
Ziegert Tillmann, PerkinElmer Life & Analytical Sciences, UK
14:00 - 14:30 Waters Lecture: Q-TOF Exact Mass MS/MS: How to Crack the Tougher Analytical Nut [Abstract]
Main Lecture Hall
14:30 - 15:45 Round table discussion on Mass Spectrometry
SESSION VI - Protein arrays
15:50 - 16:30 Invited Lecture: Protein microarray technology
Markus Templin (Thomas Joos), NMI University of Tuebingen, Germany
16:30 - 17:00 Invited Lecture: Cell Lysate Arrays: a Novel, High Performance Tool for Signalling Network Analysis
Michael Pawlak, Zeptosens AG, Switzerland
17:00 - 17:20

Oral Presentation: ClinProt: an integrated solution for clinical proteomic profiling and biomarker identification
Markus Kostrzewa, Bruker Daltonik GmbH, Leipzig, Germany

17:20 - 17:50 Invited Lecture: Putting proteomics data into context
Ralph Schlapbach, Functional Genomics Center Zurich, Switzerland
17:50 - 18:00 Closing remarks
18:00 - 18:30 FAREWELL COCKTAIL



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