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SPS' Digest

Issue 04, 4-Mar-2004

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In this issue, 87 articles have been selected from:
Disclaimer: The selection and categorisation reflect the views and understandings of contributors (i.e. SPS members).

Quick jumps to articles in: Bioinformatics (8) / Biological applications (23) / Biomedical applications (11) / Clinical applications (4) / Eukaryotic Cells And Tissues (3) / Prokaryotes (1) / Pharmacology and Toxicology (1) / Protein Characterization (13) / Protein-protein interaction (1) / PTMs (1) / Quantitation (2) / Review (2) / Methodology (19) / Books (2) / Meeting (3) / Other (4) /

Bioinformatics

Common interchange standards for proteomics data: Public availability of tools and schemaReport on the Proteomic Standards Initiative Workshop, 2nd Annual HUPO Congress, Montreal, Canada, 8-11th October 2003
Sandra Orchard, Henning Hermjakob, Randall K. Julian Jr., Kai Runte, David Sherman, Jérôme Wojcik, Weimin Zhu, Rolf Apweiler
PROTEOMICS (2004) 4(2): 490-491

Bioinformatic Comparison of Structures and Homology-Models of Matrix Metalloproteinases
Claudia Andreini, Lucia Banci, Ivano Bertini, Claudio Luchinat, and Antonio Rosato
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 21-31

Probity: A Protein Identification Algorithm with Accurate Assignment of the Statistical Significance of the Results
Jan Eriksson and David Fenyö
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 32-36

OLAV-PMF: A Novel Scoring Scheme for High-Throughput Peptide Mass Fingerprinting
Jérôme Magnin, Alexandre Masselot, Christoph Menzel, and Jacques Colinge
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 55-60

Human protein reference database as a discovery resource for proteomics
Suraj Peri, J. Daniel Navarro, Troels Z. Kristiansen, Ramars Amanchy, Vineeth Surendranath, Babylakshmi Muthusamy, T. K. B. Gandhi, K. N. Chandrika, Nandan Deshpande, Shubha Suresh, B. P. Rashmi, K. Shanker, N. Padma, Vidya Niranjan, H. C. Harsha, Naveen Talreja, B. M. Vrushabendra, M. A. Ramya, A. J. Yatish, Mary Joy, H. N. Shivashankar, M. P. Kavitha, Minal Menezes, Dipanwita Roy Choudhury, Neelanjana Ghosh, R. Saravana, Sreenath Chandran, Sujatha Mohan, Chandra Kiran Jonnalagadda, C. K. Prasad, Chandan Kumar-Sinha, Krishna S. Deshpande, and Akhilesh Pandey
Nucl. Acids. Res. (2004) 32(1): D497-D501

GELBANK: a database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes
Gyorgy Babnigg and Carol S. Giometti
Nucl. Acids. Res. (2004) 32(1): D582-D585

UniProt: the Universal Protein knowledgebase
Rolf Apweiler, Amos Bairoch, Cathy H. Wu, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger, Hongzhan Huang, Rodrigo Lopez, Michele Magrane, Maria J. Martin, Darren A. Natale, Claire O'Donovan, Nicole Redaschi, and Lai-Su L. Yeh
Nucl. Acids. Res. (2004) 32(1): D115-D119

Rice Proteome Database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003
Setsuko Komatsu, Keiichi Kojima, Kouji Suzuki, Kazuo Ozaki, and Kenichi Higo
Nucl. Acids. Res. (2004) 32(1): D388-D392

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Biological applications

Two-dimensional protein database of human pancreas
Liping Hu, Stefan Evers, Zhao Hui Lu, Yan Shen, Jie Chen
ELECTROPHORESIS (2004) 25(3): 512-518

Isolation of circulating human monocytes with high purity for proteomic analysis
Maria Gonzalez-Barderas, Julio Gallego-Delgado, Sebastián Mas, Mari Carmen Duran, Alberto Lázaro, Sergio Hernandez-Merida, Jesús Egido, Fernando Vivanco
PROTEOMICS (2004) 4(2): 432-437

Application of proteomics in phylogenetic and evolutionary studies
Alfonso Navas, Juan Pablo Albar
PROTEOMICS (2004) 4(2): 299-302

Dissecting regulatory networks by means of two-dimensional gel electrophoresis: Application to the study of the diauxic shift in the yeast Saccharomyces cerevisiae
Valérie Haurie, Francis Sagliocco, Hélian Boucherie
PROTEOMICS (2004) 4(2): 364-373

Two-dimensional reference map of Candida albicans hyphal forms
Rosa Hernández, Cesar Nombela, Rosalía Diez-Orejas, Concha Gil
PROTEOMICS (2004) 4(2): 374-382

The defense response of germinating maize embryos against fungal infection: A proteomics approach
Sonia Campo, Montserrat Carrascal, Maria Coca, Joaquin Abián, Blanca San Segundo
PROTEOMICS (2004) 4(2): 383-396

Assessing the Impact of Alternative Splicing on Domain Interactions in the Human Proteome
Alissa Resch, Yi Xing, Barmak Modrek, Michael Gorlick, Robert Riley, and Christopher Lee
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 76-83

Differential Display Proteome Analysis of PC-12 Cells Transiently Transfected with Metallothionein-3 Gene
Bo Zhou, Wei Yang, Jian-Guo Ji, and Bing-Gen Ru
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 126-131

Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography
Wojciech Szponarski, Nicolas Sommerer, Jean-Christophe Boyer, Michel Rossignol, Rémy Gibrat
PROTEOMICS (2004) 4(2): 397-406

Identification of specific plant nucleolar phosphoproteins in a functional proteomic analysis
Fernando González-Camacho, Francisco Javier Medina
PROTEOMICS (2004) 4(2): 407-417

Proteomic analysis of the oxygen-evolving complex of photosystem II under biotec stress: Studies on Nicotiana benthamiana infected with tobamoviruses
M. Luisa Pérez-Bueno, Jaber Rahoutei, Carlota Sajnani, Isabel García-Luque, Matilde Barón
PROTEOMICS (2004) 4(2): 418-425

Proteomic analysis on structural proteins of Severe Acute Respiratory Syndrome coronavirus
Wantao Ying, Yunwei Hao, Yangjun Zhang, Wenming Peng, Ede Qin, Yun Cai, Kaihua Wei, Jie Wang, Guohui Chang, Wei Sun, Shujia Dai, Xiaohai Li, Yunping Zhu, Jianqi Li, Songfeng Wu, Lihai Guo, Jingquan Dai, Jinglan Wang, Ping Wan, Tinggui Chen, Chunjuan Du, Dong Li, Jia Wan, Xuezhang Kuai, Weihua Li, Rong Shi, Handong Wei, Cheng Cao, Man Yu, Hong Liu, Fangting Dong, Donggen Wang, Xuemin Zhang, Xiaohong Qian, Qingyu Zhu, Fuchu He
PROTEOMICS (2004) 4(2): 492-504

Proteomic analysis of the effect of heat stress on hexaploid wheat grain: Characterization of heat-responsive proteins from non-prolamins fraction
Thouraya Majoul, Emmanuelle Bancel, Eugène Triboï, Jeannette Ben Hamida, Gérard Branlard
PROTEOMICS (2004) 4(2): 505-513

Proteomic analysis of diet-induced hypercholesterolemic mice
Ji Young Park, Je Kyung Seong, Young-Ki Paik
PROTEOMICS (2004) 4(2): 514-523

Copper-associated liver disease: A proteomics study of copper challenge in a sheep model
Deborah M. Simpson, Robert J. Beynon, Duncan H. L. Robertson, Michael J. Loughran, Susan Haywood
PROTEOMICS (2004) 4(2): 524-536

Differential protein expressions induced by adenovirus-mediated p16 gene transfer into Balb/c nude mouse (vol. 3, issue 12, pp. 2412 2419)
Misun Park, Hoil Kang, Sinae Lim, Choon-Taek Lee, Okhee Kim
PROTEOMICS (2004) 4(2): 546

A Comparative Analysis of an Orthologous Proteomic Environment in the Yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe
Assen Roguev, Anna Shevchenko, Daniel Schaft, Henrik Thomas, A. Francis Stewart, and Andrej Shevchenko
Mol Cell Proteomics (2004) 3(2): 125-132

The mRNA Export Factor Human Gle1 Interacts with the Nuclear Pore Complex Protein Nup155
Heidi J. Rayala, Frederic Kendirgi, Dianne M. Barry, Philip W. Majerus, and Susan R. Wente
Mol Cell Proteomics (2004) 3(2): 145-155

Proteomic Analysis of the Systemic Immune Response of Drosophila
Francine Levy, Philippe Bulet, and Laurence Ehret-Sabatier
Mol Cell Proteomics (2004) 3(2): 156-166

Electrophoretic variants of cardiac myosin heavy chain-? in Sprague Dawley rats
Peter J. Reiser, Macdonald Wick, Charles I. Pretzman
ELECTROPHORESIS (2004) 25(3): 389-395

Creatinine determination in serum by capillary electrophoresis
Rita Paroni, Isabella Fermo, Giuliana Cighetti, Carlo Alberto Ferrero, Anna Carobene, Ferruccio Ceriotti
ELECTROPHORESIS (2004) 25(3): 463-468

Biochemical characterization of symbiosome membrane proteins from Medicago truncatula root nodules
Christina M. Catalano, William S. Lane, D. Janine Sherrier
ELECTROPHORESIS (2004) 25(3): 519-531

Defining the plant disulfide proteome
Kyunghee Lee, Jungwha Lee, Youngmin Kim, Dongwon Bae, Kyu Young Kang, Sung C. Yoon, Dongbin Lim
ELECTROPHORESIS (2004) 25(3): 532-541

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Biomedical applications

Capillary zone electrophoresis for determination of carbohydrate-deficient transferrin in human serum
Isabella Fermo, Luca Germagnoli, Armando Soldarini, Fernanda Dorigatti, Rita Paroni
ELECTROPHORESIS (2004) 25(3): 469-475

Multidimensional Proteome Analysis of Human Mammary Epithelial Cells
Jon M. Jacobs, Heather M. Mottaz, Li-Rong Yu, David J. Anderson, Ronald J. Moore, Wan-Nan U. Chen, Kenneth J. Auberry, Eric F. Strittmatter, Matthew E. Monroe, Brian D. Thrall, David G. Camp, II, and Richard D. Smith
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 68-75

On Predicting Medulloblastoma Metastasis by Gene Expression Profiling
Michael J. Korenberg
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 91-96

Proteomic Analysis of Human Ventricular Cerebrospinal Fluid from Neurologically Normal, Elderly Subjects Using Two-Dimensional LC-MS/MS
Brett R. Wenner, Mark A. Lovell, and Bert C. Lynn
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 97-103

Proteomic identification of brain proteins that interact with dynein light chain LC8
Inmaculada Navarro-Lérida, Mónica Martínez Moreno, Fernando Roncal, Francisco Gavilanes, Juan Pablo Albar, Ignacio Rodríguez-Crespo
PROTEOMICS (2004) 4(2): 339-346

Applicability of discovery science approach to determine biological effects of mobile phone radiation
Dariusz Leszczynski, Reetta Nylund, Sakari Joenväärä, Jukka Reivinen
PROTEOMICS (2004) 4(2): 426-431

Proteomic analysis of lung biopsies: Differential protein expression profile between peritumoral and tumoral tissue
Patricia Alfonso, Myriam Catalá, María Luisa Rico-Morales, Gonzalo Durante-Rodríguez, Ernesto Moro-Rodríguez, Héctor Fernández-García, José M. Escribano, Emilio Álvarez-Fernández, Eduardo García-Poblete
PROTEOMICS (2004) 4(2): 442-447

Proteome analysis reveals elevated serum levels of clusterin in patients with preeclampsia
Hideki Watanabe, Hiromi Hamada, Naoki Yamada, Satoshi Sohda, Kimiko Yamakawa-Kobayashi, Hiroyuki Yoshikawa, Tadao Arinami
PROTEOMICS (2004) 4(2): 537-543

F-actin Capping (CapZ) and Other Contractile Saphenous Vein Smooth Muscle Proteins Are Altered by Hemodynamic Stress: A PROTEOMIC APPROACH
Emma McGregor, Lee Kempster, Robin Wait, Martin Gosling, Michael J. Dunn, and Janet T. Powell
Mol Cell Proteomics (2004) 3(2): 115-124

Integration of Proteomics and Genomics in Platelets: A PROFILE OF PLATELET PROTEINS AND PLATELET-SPECIFIC GENES
J. P. McRedmond, S. D. Park, D. F. Reilly, J. A. Coppinger, P. B. Maguire, D. C. Shields, and D. J. Fitzgerald
Mol Cell Proteomics (2004) 3(2): 133-144

Proteomic Analysis of Oxidative Stress-resistant Cells: A SPECIFIC ROLE FOR ALDOSE REDUCTASE OVEREXPRESSION IN CYTOPROTECTION
J. Andrew Keightley, Li Shang, and Michael Kinter
Mol Cell Proteomics (2004) 3(2): 167-175

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Clinical applications

Capillary zone electrophoresis for determination of carbohydrate-deficient transferrin in human serum
Isabella Fermo, Luca Germagnoli, Armando Soldarini, Fernanda Dorigatti, Rita Paroni
ELECTROPHORESIS (2004) 25(3): 469-475

Determination of protein markers in human serum: Analysis of protein expression in toxic oil syndrome studies
Carmen Quero, Nuria Colomé, Maria Rosario Prieto, Montserrat Carrascal, Manuel Posada, Emilio Gelpí, Joaquin Abian
PROTEOMICS (2004) 4(2): 303-315

Proteomic analysis on structural proteins of Severe Acute Respiratory Syndrome coronavirus
Wantao Ying, Yunwei Hao, Yangjun Zhang, Wenming Peng, Ede Qin, Yun Cai, Kaihua Wei, Jie Wang, Guohui Chang, Wei Sun, Shujia Dai, Xiaohai Li, Yunping Zhu, Jianqi Li, Songfeng Wu, Lihai Guo, Jingquan Dai, Jinglan Wang, Ping Wan, Tinggui Chen, Chunjuan Du, Dong Li, Jia Wan, Xuezhang Kuai, Weihua Li, Rong Shi, Handong Wei, Cheng Cao, Man Yu, Hong Liu, Fangting Dong, Donggen Wang, Xuemin Zhang, Xiaohong Qian, Qingyu Zhu, Fuchu He
PROTEOMICS (2004) 4(2): 492-504

Proteome analysis reveals elevated serum levels of clusterin in patients with preeclampsia
Hideki Watanabe, Hiromi Hamada, Naoki Yamada, Satoshi Sohda, Kimiko Yamakawa-Kobayashi, Hiroyuki Yoshikawa, Tadao Arinami
PROTEOMICS (2004) 4(2): 537-543

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Eukaryotic Cells And Tissues

Plant proteome analysis
Francisco M. Cánovas, Eliane Dumas-Gaudot, Ghislaine Recorbet, Jesus Jorrin, Hans-Peter Mock, Michel Rossignol
PROTEOMICS (2004) 4(2): 285-298

Identification and characterization of the expression of the translation initiation factor 4A (eIF4A) from Drosophila melanogaster
Greco Hernández, Vassiliki Lalioti, Joel Vandekerckhove, José M. Sierra, Juan F. Santarén
PROTEOMICS (2004) 4(2): 316-326

Application of proteome analysis to seafood authentication
Iciar Martinez, Tone Jakobsen Friis
PROTEOMICS (2004) 4(2): 347-354

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Prokaryotes

A proteomic approach to study Salmonella typhi periplasmic proteins altered by a lack of the DsbA thiol: Disulfide isomerase
David Agudo, María Teresa Mendoza, Cristina Castañares, César Nombela, Rafael Rotger
PROTEOMICS (2004) 4(2): 355-363

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Pharmacology and Toxicology

Determination of protein markers in human serum: Analysis of protein expression in toxic oil syndrome studies
Carmen Quero, Nuria Colomé, Maria Rosario Prieto, Montserrat Carrascal, Manuel Posada, Emilio Gelpí, Joaquin Abian
PROTEOMICS (2004) 4(2): 303-315

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Protein Characterization

Systematic screening of reactive cysteine proteomes
Marika Lindahl, Francisco J. Florencio
PROTEOMICS (2004) 4(2): 448-450

A strategy to improve peptide mass fingerprinting matches through the optimization of matrix-assisted laser desorption/ionization matrix selection and formulation
Neerav D. Padliya, Troy D. Wood
PROTEOMICS (2004) 4(2): 466-473

Result-driven strategies for protein identification and quantitation - a way to optimize experimental design and derive reliable results
Armin Graber, Peter S. Juhasz, Nikita Khainovski, Kenneth C. Parker, Dale H. Patterson, Stephen A. Martin
PROTEOMICS (2004) 4(2): 474-489

Whole Protein Dissociation in a Quadrupole Ion Trap: Identification of an a Priori Unknown Modified Protein
Ravi Amunugama, Jason M. Hogan, Kelly A. Newton, and Scott A. McLuckey
ANALYTICAL CHEMISTRY (2004) 76(3): 720-727

Analysis of Protein Solvent Accessible Surfaces by Photochemical Oxidation and Mass Spectrometry
Joshua S. Sharp, Jeffrey M. Becker, and Robert L. Hettich
ANALYTICAL CHEMISTRY (2004) 76(3): 672-683

Affecting Proton Mobility in Activated Peptide and Whole Protein Ions via Lysine Guanidination
Sharon J. Pitteri, Gavin E. Reid, and Scott A. McLuckey
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 46-54

Theoretical and Experimental Prospects for Protein Identification Based Solely on Accurate Mass Measurement
Fei He, Mark R. Emmett, Kristina Håkansson, Christopher L. Hendrickson, and Alan G. Marshall
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 61-67

Identification of the Chicken MARCKS Phosphorylation Site Specific for Differentiating Neurons as Ser 25 Using a Monoclonal Antibody and Mass Spectrometry
Flavio R. Zolessi, Rosario Durán, Ulla Engström, Carlos Cerveñansky, Ulf Hellman, and Cristina Arruti
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 84-90

Fluorogenic Derivatization Reagents Suitable for Isolation and Identification of Cysteine-Containing Proteins Utilizing High-Performance Liquid Chromatography-Tandem Mass Spectrometry
Mayumi Masuda, Chifuyu Toriumi, Tomofumi Santa, and Kazuhiro Imai
ANALYTICAL CHEMISTRY (2004) 76(3): 728-735

Snake venomics: Characterization of protein families in Sistrurus barbouri venom by cysteine mapping, N-terminal sequencing, and tandem mass spectrometry analysis
Paula Juárez, Libia Sanz, Juan J. Calvete
PROTEOMICS (2004) 4(2): 327-338

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Protein-protein interaction

Construction of an Artificial Receptor Protein (?Anticalin?) Based on the Human Apolipoprotein D
Martin Vogt, Arne Skerra
ChemBioChem (2004) 5(2): 191-199

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PTMs

Screening for N-glycosylated proteins by liquid chromatography mass spectrometry
Jakob Bunkenborg, Bartosz J. Pilch, Alexandre V. Podtelejnikov, Jacek R. Wi?niewski
PROTEOMICS (2004) 4(2): 454-465

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Quantitation

Histidine-Rich Peptide Selection and Quantification in Targeted Proteomics
Diya Ren, Natalia A. Penner, Benjamin E. Slentz, and Fred E. Regnier
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 37-45

A Simple Solid Phase Mass Tagging Approach for Quantitative Proteomics
Yang Shi, Rong Xiang, Janet K. Crawford, Christopher M. Colangelo, Csaba Horváth, and James A. Wilkins
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 104-111

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Review

Common interchange standards for proteomics data: Public availability of tools and schemaReport on the Proteomic Standards Initiative Workshop, 2nd Annual HUPO Congress, Montreal, Canada, 8-11th October 2003
Sandra Orchard, Henning Hermjakob, Randall K. Julian Jr., Kai Runte, David Sherman, Jérôme Wojcik, Weimin Zhu, Rolf Apweiler
PROTEOMICS (2004) 4(2): 490-491

Mass spectrometry of oligosaccharides
Joseph Zaia
Mass Spectrometry Reviews (2004) 23(3): 161-227

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Methodology

A very thin coating for capillary zone electrophoresis of proteins based on a tri(ethylene glycol)-terminated alkyltrichlorosilane
Robert J. Meagher, Jiehyun Seong, Paul E. Laibinis, Annelise E. Barron
ELECTROPHORESIS (2004) 25(3): 405-414

Analysis of amino acids in individual human erythrocytes by capillary electrophoresis with electroporation for intracellular derivatization and laser-induced fluorescence detection
Hua Zhang, Wenrui Jin
ELECTROPHORESIS (2004) 25(3): 480-486

Native and sodium dodecyl sulfate-capillary gel electrophoresis of proteins on a single microchip
Shuo-Wen Tsai, Michael Loughran, Hiroaki Suzuki, Isao Karube
ELECTROPHORESIS (2004) 25(3): 494-501

Explorative data analysis of two-dimensional electrophoresis gels
Jakob Schultz, David Mark Gottlieb, Marianne Petersen, Ljiljana Nesic, Susanne Jacobsen, Ib Søndergaard
ELECTROPHORESIS (2004) 25(3): 502-511

Combinatorial Approaches To Novel Proteins
Tomoaki Matsuura, Andreas Ernst, David L. Zechel, Andreas Plückthun
ChemBioChem (2004) 5(2): 177-182

Analysis of Protein Solvent Accessible Surfaces by Photochemical Oxidation and Mass Spectrometry
Joshua S. Sharp, Jeffrey M. Becker, and Robert L. Hettich
ANALYTICAL CHEMISTRY (2004) 76(3): 672-683

Fluorogenic Derivatization Reagents Suitable for Isolation and Identification of Cysteine-Containing Proteins Utilizing High-Performance Liquid Chromatography-Tandem Mass Spectrometry
Mayumi Masuda, Chifuyu Toriumi, Tomofumi Santa, and Kazuhiro Imai
ANALYTICAL CHEMISTRY (2004) 76(3): 728-735

Gel Based Isoelectric Focusing of Peptides and the Utility of Isoelectric Point in Protein Identification
Benjamin J. Cargile, Jonathan L. Bundy, Thaddeus W. Freeman, and James L. Stephenson, Jr.
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 112-119

Integration of Isoelectric Focusing with Parallel Sodium Dodecyl Sulfate Gel Electrophoresis for Multidimensional Protein Separations in a Plastic Microfludic Network
Yan Li, Jesse S. Buch, Frederick Rosenberger, Don L. DeVoe, and Cheng S. Lee
ANALYTICAL CHEMISTRY (2004) 76(3): 742-748

Proteomics Approach to Identifying ATP-Covalently Modified Proteins
Paul G. Besant, Michael V. Lasker, Cuong D. Bui, Eiling Tan, Paul V. Attwood, and Christoph W. Turck
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 120-125

Biofilm Proteome: Homogeneity or Versatility?
Sébastien Vilain, Pascal Cosette, Irène Zimmerlin, Jean-Paul Dupont, Guy-Alain Junter, and Thierry Jouenne
JOURNAL OF PROTEOME RESEARCH (2004) 3(1): 132-136

Identification of 4-Hydroxy-2-nonenal-Modified Peptides within Unfractionated Digests Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
François Fenaille, Jean-Claude Tabet, and Philippe A. Guy
ANALYTICAL CHEMISTRY (2004) 76(4): 867-873

Combining Liquid Chromatography with MALDI Mass Spectrometry Using a Heated Droplet Interface
Boyan Zhang, Chris McDonald, and Liang Li
ANALYTICAL CHEMISTRY (2004) 76(4): 992-1001

Ultra-High-Efficiency Strong Cation Exchange LC/RPLC/MS/MS for High Dynamic Range Characterization of the Human Plasma Proteome
Yufeng Shen, Jon M. Jacobs, David G. Camp, II, Ruihua Fang, Ronald J. Moore, and Richard D. Smith Wenzhong Xiao and Ronald W. Davis Ronald G. Tompkins
ANALYTICAL CHEMISTRY (2004) 76(4): 1134-1144

Nanoelectrospray Ionization of Protein Mixtures: Solution pH and Protein pI
Peng Pan, Harsha P. Gunawardena, Yu Xia, and Scott A. McLuckey
ANALYTICAL CHEMISTRY (2004) 76(4): 1165-1174

Isolation of circulating human monocytes with high purity for proteomic analysis
Maria Gonzalez-Barderas, Julio Gallego-Delgado, Sebastián Mas, Mari Carmen Duran, Alberto Lázaro, Sergio Hernandez-Merida, Jesús Egido, Fernando Vivanco
PROTEOMICS (2004) 4(2): 432-437

Two-dimensional Blue Native/SDS Gel Electrophoresis of Multi-Protein Complexes from Whole Cellular Lysates: A PROTEOMICS APPROACH
Margarita M. Camacho-Carvajal, Bernd Wollscheid, Ruedi Aebersold, Viktor Steimle, and Wolfgang W. A. Schamel
Mol Cell Proteomics (2004) 3(2): 176-182

Improved resolution of the human adipose tissue proteome at alkaline and wide range pH by the addition of hydroxyethyl disulfide
Marta Cortón, Gemma Villuendas, José I. Botella, José L. San Millán, Héctor F. Escobar-Morreale, Belén Peral
PROTEOMICS (2004) 4(2): 438-441

A technical trick for studying proteomics in parallel to transcriptomics in symbiotic root-fungus interactions
Eliane Dumas-Gaudot, Nardjis Amiour, Stéphanie Weidmann, Gwénaëlle Bestel-Corre, Benoit Valot, Sébastien Lenogue, Vivienne Gianinazzi-Pearson, Silvio Gianinazzi
PROTEOMICS (2004) 4(2): 451-453

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Books

Book Reviews: Protein Misfolding and Disease: Principles and Protocols. By Peter Bross and Niels Gregersen (Editors)
Alex L. Mitchell
PROTEOMICS (2004) 4(2): 544

Encyclopedic Dictionary of Genetics, Genomics and Proteomics, 2nd Edition. By George P. Rédei
Nigel Brand
PROTEOMICS (2004) 4(2): 545

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Meeting

Meetings: Electrophoresis 3/2004
ELECTROPHORESIS (2004) 25(3): 542

Proteomics at Cordoba
Juan Pablo Albar, Concha Gil
PROTEOMICS (2004) 4(2): NA

Meetings: Proteomics 2/2004
PROTEOMICS (2004) 4(2): 546

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Other

Editorial: Protein Design
ChemBioChem (2004) 5(2): 143-144

Consensus Design of Repeat Proteins
Patrik Forrer, H. Kaspar Binz, Michael T. Stumpp, Andreas Plückthun
ChemBioChem (2004) 5(2): 183-189

Calendar
Mol Cell Proteomics (2004) 3(2): 183-184

New on the Market: Proteomics 2/2004
PROTEOMICS (2004) 4(2): 547-549

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