%A Higashi Y
%A Hirai MY
%A Fujiwara T
%A Naito S
%A Noji M
%A Saito K
%T Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition
%0 Journal Article
%D 2006
%J Plant J
%P 557-71
%V 48
%N 4
%U http://dx.doi.org/10.1111/j.1365-313X.2006.02900.x

%A Markus Roessler
%A Wolfgang Rollinger
%A Liliana Mantovani-Endl
%A Marie-Luise Hagmann
%A Stefan Palme
%A Peter Berndt
%A Alfred M. Engel
%A Michael Pfeffer
%A Johann Karl
%A Heinz Bodenmuller
%A Josef Ruschoff
%A Thomas Henkel
%A Gerhard Rohr
%A Siegbert Rossol
%A Wolfgang Rosch
%A H
%T Identification of PSME3 as a Novel Serum Tumor Marker for Colorectal Cancer by Combining Two-dimensional Polyacrylamide Gel Electrophoresis with a Strictly Mass Spectrometry-based Approach for Data Analysis
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2092-2101
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2092?etoc

%A An Chi
%A Julio C. Valencia
%A Zhang-Zhi Hu
%A Hidenori Watabe
%A Hiroshi Yamaguchi
%A Nancy J. Mangini
%A Hongzhan Huang
%A Victor A. Canfield
%A Keith C. Cheng
%A Feng Yang
%A Riichiro Abe
%A Shoichi Yamagishi
%A Jeffrey Shabanowitz
%A Vincent J. Hearing
%A Cathy Wu
%A Ettore Appell
%T Proteomic and Bioinformatic Characterization of the Biogenesis and Function of Melanosomes
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3135-3144
%V 5
%N 11
%U http://dx.doi.org/10.1021/pr060363j

%A Lee DH
%A Kim SG
%A Park YC
%A Nam SW
%A Lee KH
%A Seo JH
%T Proteome analysis of recombinant Escherichia coli producing human glucagon-like peptide-1
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.jchromb.2006.09.042

%A D. C. Anderson
%A Elsie L. Campbell
%A John C. Meeks
%T A Soluble 3D LC/MS/MS Proteome of the Filamentous Cyanobacterium Nostoc punctiforme
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3096-3104
%V 5
%N 11
%U http://dx.doi.org/10.1021/pr060272m

%A Claire R. Davies
%A Joanna S. Morris
%A Matthew R. Griffiths
%A Martin J. Page
%A Andrew Pitt
%A Torsten Stein
%A Barry A. Gusterson
%T Proteomic analysis of the mouse mammary gland is a powerful tool to identify novel proteins that are differentially expressed during mammary development
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5694-5704
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600202

%A Hummon AB
%A Richmond TA
%A Verleyen P
%A Baggerman G
%A Huybrechts J
%A Ewing MA
%A Vierstraete E
%A Rodriguez-Zas SL
%A Schoofs L
%A Robinson GE
%A Sweedler JV
%T From the genome to the proteome: uncovering peptides in the Apis brain
%0 Journal Article
%D 2006
%J Science
%P 647-9
%V 314
%N 5799
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17068263&dopt=Abstract

%A Roux MM
%A Townley IK
%A Raisch M
%A Reade A
%A Bradham C
%A Humphreys G
%A Gunaratne HJ
%A Killian CE
%A Moy G
%A Su YH
%A Ettensohn CA
%A Wilt F
%A Vacquier VD
%A Burke RD
%A Wessel G
%A Foltz KR
%T A functional genomic and proteomic perspective of sea urchin calcium signaling and egg activation
%0 Journal Article
%D 2006
%J Dev Biol
%P 416-33
%V 300
%N 1
%U http://dx.doi.org/10.1016/j.ydbio.2006.09.006

%A Chun-Ming Huang
%A Chao-Cheng Wang
%A Stephen Barnes
%A Craig A. Elmets
%T In vivo detection of secreted proteins from wounded skin using capillary ultrafiltration probes and mass spectrometric proteomics
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5805-5814
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600163

%A Eric Bertrand
%A Christine Fritsch
%A Sigrid Diether
%A George Lambrou
%A Dieter Muller
%A Frank Schaeffel
%A Patrick Schindler
%A Katrina L. Schmid
%A Jan van Oostrum
%A Hans Voshol
%T Identification of Apolipoprotein A-I as a "STOP" Signal for Myopia
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2158-2166
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2158?etoc

%A Jones AM
%A Thomas V
%A Bennett MH
%A Mansfield J
%A Grant M
%T Modifications to the Arabidopsis defense Proteome Occur Prior to Significant Transcriptional Change in Response to Inoculation with Pseudomonas syringae
%0 Journal Article
%D 2006
%J Plant Physiol
%P 1603-20
%V 142
%N 4
%U http://dx.doi.org/10.1104/pp.106.086231

%A Zhenpeng Li
%A Michael Kreutzer
%A Stefan Mikkat
%A Nikica Mi?e
%A Michael O. Glocker
%A Brigitte M. Pützer
%T Proteomic analysis of the E2F1 response in p53-negative cancer cells: New aspects in the regulation of cell survival and death
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5735-5745
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600290

%A Alberto Bavelloni
%A Irene Faenza
%A Gabriella Cioffi
%A Manuela Piazzi
%A Daniela Parisi
%A Ivan Matic
%A Nadir M. Maraldi
%A Lucio Cocco
%T Proteomic-based analysis of nuclear signaling: PLC?1 affects the expression of the splicing factor SRp20 in Friend erythroleukemia cells
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5725-5734
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600318

%A Garcia JS
%A Gratao PL
%A Azevedo RA
%A Arruda MA
%T Metal Contamination Effects on Sunflower (Helianthus annuus L.) Growth and Protein Expression in Leaves During Development
%0 Journal Article
%D 2006
%J J Agric Food Chem
%P 8623-8630
%V 54
%N 22
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17061843&dopt=Abstract

%A Duan ZG
%A Yan XJ
%A He XZ
%A Zhou H
%A Chen P
%A Cao R
%A Xiong JX
%A Hu WJ
%A Wang XC
%A Liang SP
%T Extraction and protein component analysis of venom from the dissected venom glands of Latrodectus tredecimguttatus
%0 Journal Article
%D 2006
%J Comp Biochem Physiol B Biochem Mol Biol
%P 350-7
%V 145
%N 3-4
%U http://dx.doi.org/10.1016/j.cbpb.2006.08.006

%A Joko Prayitno
%A Nijat Imin
%A Barry G. Rolfe
%A Ulrike Mathesius
%T Identification of Ethylene-Mediated Protein Changes during Nodulation in Medicago truncatula Using Proteome Analysis
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3084-3095
%V 5
%N 11
%U http://dx.doi.org/10.1021/pr0602646

%A Jun-yong Jia
%A Stephanie Lamer
%A Michael Schumann
%A Michael R. Schmidt
%A Eberhard Krause
%A Volker Haucke
%T Quantitative Proteomics Analysis of Detergent-resistant Membranes from Chemical Synapses: Evidence for Cholesterol as Spatial Organizer of Synaptic Vesicle Cycling
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2060-2071
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2060?etoc

%A Baptiste Leroy
%A Gerard Toubeau
%A Paul Falmagne
%A Ruddy Wattiez
%T Identification and Characterization of New Protein Chemoattractants in the Frog Skin Secretome
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2114-2123
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2114?etoc

%A Kaplan N
%A Linial M
%T ProtoBee: Hierarchical classification and annotation of the honey bee proteome
%0 Journal Article
%D 2006
%J Genome Res
%P 1431-8
%V 16
%N 11
%U http://dx.doi.org/10.1101/gr.4916306

%A Edita Sostaric
%A Aristophanes S. Georgiou
%A Chi H. Wong
%A Paul F. Watson
%A William V. Holt
%A Alireza Fazeli
%T Global Profiling of Surface Plasma Membrane Proteome of Oviductal Epithelial Cells
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3029-3037
%V 5
%N 11
%U http://dx.doi.org/10.1021/pr060366w

%A Hiba El Hajj
%A Emmanuelle Demey
%A Joël Poncet
%A Maryse Lebrun
%A Bo Wu
%A Nathalie Galéotti
%A Marie Noëlle Fourmaux
%A Odile Mercereau-Puijalon
%A Henri Vial
%A Gilles Labesse
%A Jean François Dubremetz
%T The ROP2 family of Toxoplasma gondii rhoptry proteins: Proteomic and genomic characterization and molecular modeling
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5773-5784
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600187

%A Radovan Hynek
%A Birte Svensson
%A Ole N rregaard Jensen
%A Vibeke Barkholt
%A Christine Finnie
%T Enrichment and Identification of Integral Membrane Proteins from Barley Aleurone Layers by Reversed-Phase Chromatography, SDS-PAGE, and LC-MS/MS
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3105-3113
%V 5
%N 11
%U http://dx.doi.org/10.1021/pr0602850

%A Edwin Ho
%A Andrew Hayen
%A Marc R. Wilkins
%T Characterisation of organellar proteomes: A guide to subcellular proteomic fractionation and analysis
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5746-5757
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600241

%A Van C. Kelly
%A Sulee Kuy
%A David J. Palmer
%A Zhenzhong Xu
%A Stephen R. Davis
%A Garth J. Cooper
%T Characterization of bovine seminal plasma by proteomics
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5826-5833
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200500830

%A Coldham NG
%A Randall LP
%A Piddock LJ
%A Woodward MJ
%T Effect of fluoroquinolone exposure on the proteome of Salmonella enterica serovar Typhimurium
%0 Journal Article
%D 2006
%J J Antimicrob Chemother
%P 1145-53
%V 58
%N 6
%U http://dx.doi.org/10.1093/jac/dkl413

%A Delphine Pflieger
%A Sandrine Chabane
%A Olivier Gaillard
%A Bruno Alain Bernard
%A Patrick Ducoroy
%A Jean Rossier
%A Joëlle Vinh
%T Comparative proteomic analysis of extracellular matrix proteins secreted by two types of skin fibroblasts
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5868-5879
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200402040

%A Giri AP
%A Wunsche H
%A Mitra S
%A Zavala JA
%A Muck A
%A Svatos A
%A Baldwin IT
%T Molecular Interactions between the Specialist Herbivore Manduca sexta (Lepidoptera, Sphingidae) and Its Natural Host Nicotiana attenuata. VII. Changes in the Plant's proteomes
%0 Journal Article
%D 2006
%J Plant Physiol
%P 1621-41
%V 142
%N 4
%U http://dx.doi.org/10.1104/pp.106.088781

%A Saleem RA
%A Smith JJ
%A Aitchison JD
%T Proteomics of the peroxisome
%0 Journal Article
%D 2006
%J Biochim Biophys Acta
%P 1541-51
%V 1763
%N 12
%U http://dx.doi.org/10.1016/j.bbamcr.2006.09.005

%A Noble J
%A Dua RS
%A Locke I
%A Eeles R
%A Gui GP
%A Isacke CM
%T Proteomic analysis of nipple aspirate fluid throughout the menstrual cycle in healthy pre-menopausal women
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s10549-006-9402-x

%A Megumi Hato
%A Hiroaki Nakagawa
%A Masaki Kurogochi
%A Tomoya O. Akama
%A Jamey D. Marth
%A Michiko N. Fukuda
%A Shin-Ichiro Nishimura
%T Unusual N-Glycan Structures in {alpha}-Mannosidase II/IIx Double Null Embryos Identified by a Systematic Glycomics Approach Based on Two-dimensional LC Mapping and Matrix-dependent Selective Fragmentation Method in MALDI-TOF/TOF Mass Spectrometry
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2146-2157
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2146?etoc

%A Francesca Zappacosta
%A Therese S. Collingwood
%A Michael J. Huddleston
%A Roland S. Annan
%T A Quantitative Results-driven Approach to Analyzing Multisite Protein Phosphorylation: The Phosphate-dependent Phosphorylation Profile of the Transcription Factor Pho4
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2019-2030
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2019?etoc

%A San-Yuan Huang
%A Yu-Hui Chen
%A Shih-Hua Teng
%A I-Chung Chen
%A Lin-Lin Ho
%A Ching-Fu Tu
%T Protein expression of lymphocytes in HLA-DR transgenic pigs by a proteomic approach
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5815-5825
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600054

%A Derek P. Thomas
%A Stefano P. Bachmann
%A Jose L. Lopez-Ribot
%T Proteomics for the analysis of the Candida albicans biofilm lifestyle
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5795-5804
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600332

%A Carroll J
%A Fearnley IM
%A Walker JE
%T Definition of the mitochondrial proteome by measurement of molecular masses of membrane proteins
%0 Journal Article
%D 2006
%J Proc Natl Acad Sci U S A
%P 16170-5
%V 103
%N 44
%U http://dx.doi.org/10.1073/pnas.0607719103

%A Anja Tabbert
%A Ferdinand Kappes
%A Rolf Knippers
%A Josef Kellermann
%A Friedrich Lottspeich
%A Elisa Ferrando-May
%T Hypophosphorylation of the architectural chromatin protein DEK in death-receptor-induced apoptosis revealed by the isotope coded protein label proteomic platform
%0 Journal Article
%D 2006
%J PROTEOMICS
%P 5758-5772
%V 6
%N 21
%U http://dx.doi.org/10.1002/pmic.200600197

%A Hong Wang and David L. Brautigan
%T Peptide Microarray Analysis of Substrate Specificity of the Transmembrane Ser/Thr Kinase KPI-2 Reveals Reactivity with Cystic Fibrosis Transmembrane Conductance Regulator and Phosphorylase
%0 Journal Article
%D 2006
%J Mol Cell Proteomics
%P 2124-2130
%V 5
%N 11
%U http://www.mcponline.org/cgi/content/abstract/5/11/2124?etoc

%A Chibani K
%A Ali-Rachedi S
%A Job C
%A Job D
%A Jullien M
%A Grappin P
%T Proteomic Analysis of Seed Dormancy in Arabidopsis
%0 Journal Article
%D 2006
%J Plant Physiol
%P 1493-510
%V 142
%N 4
%U http://dx.doi.org/10.1104/pp.106.087452