%A Dias GS
%A Oliveira JL
%A Vicente J
%A Martin-Sanchez F
%T Integrating Medical and Genomic Data: a Sucessful Example for Rare Diseases
%0 Journal Article
%D 2006
%J Stud Health Technol Inform
%P 125-130
%V 124
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17108515&dopt=Abstract

%A Lange E
%A Gropl C
%A Reinert K
%A Kohlbacher O
%A Hildebrandt A
%T High-accuracy peak picking of proteomics data using wavelet techniques
%0 Journal Article
%D 2006
%J Pac Symp Biocomput
%P 243-54
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094243&dopt=Abstract

%A Arnold RJ
%A Jayasankar N
%A Aggarwal D
%A Tang H
%A Radivojac P
%T A machine learning approach to predicting peptide fragmentation spectra
%0 Journal Article
%D 2006
%J Pac Symp Biocomput
%P 219-30
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094241&dopt=Abstract

%A Pratapa PN
%A Patz EF Jr
%A Hartemink AJ
%T Finding diagnostic biomarkers in proteomic spectra
%0 Journal Article
%D 2006
%J Pac Symp Biocomput
%P 279-90
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094246&dopt=Abstract

%A Wang H
%A Fu Y
%A Sun R
%A He S
%A Zeng R
%A Gao W
%T An SVM scorer for more sensitive and reliable peptide identification via tandem mass spectrometry
%0 Journal Article
%D 2006
%J Pac Symp Biocomput
%P 303-14
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094248&dopt=Abstract

%A Nagarajan V
%A Kaushik N
%A Murali B
%A Zhang C
%A Lakhera S
%A Elasri MO
%A Deng Y
%T A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17118141&dopt=Abstract

%A Seungjin Na and Eunok Paek
%T Quality Assessment of Tandem Mass Spectra Based on Cumulative Intensity Normalization
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3241-3248
%V 5
%N 12
%U http://dx.doi.org/10.1021/pr0603248

%A Kuo-Chen Chou and Hong-Bin Shen
%T Large-Scale Predictions of Gram-Negative Bacterial Protein Subcellular Locations
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3420-3428
%V 5
%N 12
%U http://dx.doi.org/10.1021/pr060404b

%A Oh C
%A Zak SH
%A Mirzaei H
%A Buck C
%A Regnier FE
%A Zhang X
%T Neural network prediction of peptide separation in strong anion exchange chromatography
%0 Journal Article
%D 2007
%J Bioinformatics
%P 114-8
%V 23
%N 1
%U http://dx.doi.org/10.1093/bioinformatics/btl561

%A Higdon R
%A Kolker E
%T A predictive model for identifying proteins by a single peptide match
%0 Journal Article
%D 2007
%J Bioinformatics
%P 277-80
%V 23
%N 3
%U http://dx.doi.org/10.1093/bioinformatics/btl595

%A Wolski W
%A Farrow M
%A Emde A
%A Lehrach H
%A Lalowski M
%A Reinert K
%T Analytical model of peptide mass cluster centres with applications
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1186/1477-5956-4-18

%A Bloom GC
%A Eschrich S
%A Zhou JX
%A Coppola D
%A Yeatman TJ
%T Elucidation of a protein signature discriminating six common types of adenocarcinoma
%0 Journal Article
%D 2007
%J Int J Cancer
%P 769-75
%V 120
%N 4
%U http://dx.doi.org/10.1002/ijc.22041

%A Falkner JA
%A Falkner JW
%A Andrews PC
%T ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats
%0 Journal Article
%D 2007
%J Bioinformatics
%P 262-3
%V 23
%N 2
%U http://dx.doi.org/10.1093/bioinformatics/btl573

%A Richard J. Jacob and Rainer Cramer
%T PIGOK: Linking Protein Identity to Gene Ontology and Function
%0 Journal Article
%D 2006
%J JOURNAL OF PROTEOME RESEARCH
%P 3429-3432
%V 5
%N 12
%U http://dx.doi.org/10.1021/pr0601537

%A Rohrbough JG
%A Breci L
%A Merchant N
%A Miller S
%A Haynes PA
%T Verification of single-Peptide protein identifications by the application of complementary database search algorithms
%0 Journal Article
%D 2006
%J J Biomol Tech
%P 327-32
%V 17
%N 5
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17122065&dopt=Abstract

%A Krokhin OV
%T Sequence-Specific Retention Calculator. Algorithm for Peptide Retention Prediction in Ion-Pair RP-HPLC: Application to 300- and 100-A Pore Size C18 Sorbents
%0 Journal Article
%D 2006
%J Anal Chem
%P 7785-7795
%V 78
%N 22
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17105172&dopt=Abstract

%A Rodriguez-Pineiro AM
%A Rodriguez-Berrocal FJ
%A Paez de la Cadena M
%T Improvements in the search for potential biomarkers by proteomics: Application of principal component and discriminant analyses for two-dimensional maps evaluation
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.jchromb.2006.09.021

%A Heazlewood JL
%A Verboom RE
%A Tonti-Filippini J
%A Small I
%A Millar AH
%T SUBA: the Arabidopsis Subcellular Database
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P D213-8
%V 35
%N Database issue
%U http://dx.doi.org/10.1093/nar/gkl863

%A Chich JF
%A David O
%A Villers F
%A Schaeffer B
%A Lutomski D
%A Huet S
%T Statistics for proteomics: Experimental design and 2-DE differential analysis
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.jchromb.2006.09.033

%A Nuin PA
%A Wang Z
%A Tillier ER
%T The accuracy of several multiple sequence alignment programs for proteins
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17062146&dopt=Abstract

%A Zhang Y
%A Zhang Y
%A Adachi J
%A Olsen JV
%A Shi R
%A de Souza G
%A Pasini E
%A Foster LJ
%A Macek B
%A Zougman A
%A Kumar C
%A Wisniewski JR
%A Jun W
%A Mann M
%T MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P D771-9
%V 35
%N Database issue
%U http://dx.doi.org/10.1093/nar/gkl784