TY  - JOUR
A1  - He Z
A1  - Kisla D
A1  - Zhang L
A1  - Yuan C
A1  - Green-Church KB
A1  - Yousef AE
T1  - Isolation and Identification of a Paenibacillus polymyxa Strain That Co-produces a Novel Lantibiotic and Polymyxin
JO  - Appl Environ Microbiol
Y1  - 2007
SP  - 168
EP  - 78
VL  - 73
IS  - 1
UR  - http://dx.doi.org/10.1128/AEM.02023-06
ER  - 

TY  - JOUR
A1  - Yamashita R
A1  - Fujiwara Y
A1  - Ikari K
A1  - Hamada K
A1  - Otomo A
A1  - Yasuda K
A1  - Noda M
A1  - Kaburagi Y
T1  - Extracellular proteome of human hepatoma cell, HepG2 analyzed using two-dimensional liquid chromatography coupled with tandem mass spectrometry
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1007/s11010-006-9354-9
ER  - 

TY  - JOUR
A1  - Aagaard JE
A1  - Yi X
A1  - Maccoss MJ
A1  - Swanson WJ
T1  - Rapidly evolving zona pellucida domain proteins are a major component of the vitelline envelope of abalone eggs
JO  - Proc Natl Acad Sci U S A
Y1  - 2006
SP  - 17302
EP  - 7
VL  - 103
IS  - 46
UR  - http://dx.doi.org/10.1073/pnas.0603125103
ER  - 

TY  - JOUR
A1  - Pratapa PN
A1  - Patz EF Jr
A1  - Hartemink AJ
T1  - Finding diagnostic biomarkers in proteomic spectra
JO  - Pac Symp Biocomput
Y1  - 2006
SP  - 279
EP  - 90
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094246&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Branlard G
A1  - Bancel E
T1  - Protein extraction from cereal seeds
JO  - Methods Mol Biol
Y1  - 2006
SP  - 15
EP  - 26
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093298&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Mikesh LM
A1  - Ueberheide B
A1  - Chi A
A1  - Coon JJ
A1  - Syka JE
A1  - Shabanowitz J
A1  - Hunt DF
T1  - The utility of ETD mass spectrometry in proteomic analysis
JO  - Biochim Biophys Acta
Y1  - 2006
SP  - 1811
EP  - 22
VL  - 1764
IS  - 12
UR  - http://dx.doi.org/10.1016/j.bbapap.2006.10.003
ER  - 

TY  - JOUR
A1  - Miyagi M
A1  - Rao KC
T1  - Proteolytic (18)O-labeling strategies for quantitative proteomics
JO  - Mass Spectrom Rev
Y1  - 2007
SP  - 121
EP  - 36
VL  - 26
IS  - 1
UR  - http://dx.doi.org/10.1002/mas.20116
ER  - 

TY  - JOUR
A1  - Mouls L
A1  - Subra G
A1  - Aubagnac JL
A1  - Martinez J
A1  - Enjalbal C
T1  - Tandem mass spectrometry of amidated peptides
JO  - J Mass Spectrom
Y1  - 2006
SP  - 1470
EP  - 83
VL  - 41
IS  - 11
UR  - http://dx.doi.org/10.1002/jms.1118
ER  - 

TY  - JOUR
A1  - James A. Dowell
A1  - William Vander Heyden
A1  - Lingjun Li
T1  - Rat Neuropeptidomics by LC-MS/MS and MALDI-FTMS: Enhanced Dissection and Extraction Techniques Coupled with 2D RP-RP HPLC
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3368
EP  - 3375
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0603452
ER  - 

TY  - JOUR
A1  - Nimeus E
A1  - Malmstrom J
A1  - Johnsson A
A1  - Marko-Varga G
A1  - Ferno M
T1  - Proteomic analysis identifies candidate proteins associated with distant recurrences in breast cancer after adjuvant chemotherapy
JO  - J Pharm Biomed Anal
Y1  - 2007
SP  - 1086
EP  - 93
VL  - 43
IS  - 3
UR  - http://dx.doi.org/10.1016/j.jpba.2006.09.019
ER  - 

TY  - JOUR
A1  - Gallego-Delgado J
A1  - Lazaro A
A1  - Osende JI
A1  - Esteban V
A1  - Barderas MG
A1  - Gomez-Guerrero C
A1  - Vega R
A1  - Vivanco F
A1  - Egido J
T1  - Proteomic analysis of early left ventricular hypertrophy secondary to hypertension: modulation by antihypertensive therapies
JO  - J Am Soc Nephrol
Y1  - 2006
SP  - S159
EP  - 64
VL  - 17
IS  - 12 Suppl 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17130255&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Ivakhno S
A1  - Kornelyuk A
T1  - Quantitative proteomics and its applications for systems biology
JO  - Biochemistry (Mosc)
Y1  - 2006
SP  - 1060
EP  - 72
VL  - 71
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17125453&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Easton JA
A1  - Thompson P
A1  - Crowder MW
T1  - Time-dependent Translational Response of E. coli to Excess Zn(II)
JO  - J Biomol Tech
Y1  - 2006
SP  - 303
EP  - 7
VL  - 17
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17122063&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Jun Ito
A1  - Joshua L. Heazlewood
A1  - A. Harvey Millar
T1  - Analysis of the Soluble ATP-Binding Proteome of Plant Mitochondria Identifies New Proteins and Nucleotide Triphosphate Interactions within the Matrix
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3459
EP  - 3469
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060403j
ER  - 

TY  - JOUR
A1  - Wan HC
A1  - Melo RC
A1  - Jin Z
A1  - Dvorak AM
A1  - Weller PF
T1  - Roles and origins of leukocyte lipid bodies: proteomic and ultrastructural studies
JO  - FASEB J
Y1  - 2007
SP  - 167
EP  - 78
VL  - 21
IS  - 1
UR  - http://dx.doi.org/10.1096/fj.06-6711com
ER  - 

TY  - JOUR
A1  - Perroud B
A1  - Lee J
A1  - Valkova N
A1  - Dhirapong A
A1  - Lin PY
A1  - Fiehn O
A1  - Kueltz D
A1  - Weiss RH
T1  - Pathway analysis of kidney cancer using proteomics and metabolic profiling
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17123452&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Strmecki L
A1  - Bloomfield G
A1  - Araki T
A1  - Dalton E
A1  - Skelton J
A1  - Schilde C
A1  - Harwood A
A1  - Williams JG
A1  - Ivens A
A1  - Pears C
T1  - Proteomic and micro-array analyses of the Dictyostelium Zak1-GSK-3 signalling pathway reveals a role in early development
JO  - Eukaryot Cell
Y1  - 2007
SP  - 245
EP  - 52
VL  - 6
IS  - 2
UR  - http://dx.doi.org/10.1128/EC.00204-06
ER  - 

TY  - JOUR
A1  - Argyrou A
A1  - Jin L
A1  - Siconilfi-Baez L
A1  - Angeletti RH
A1  - Blanchard JS
T1  - Proteome-wide Profiling of Isoniazid Targets in Mycobacterium tuberculosis
JO  - Biochemistry
Y1  - 2006
SP  - 13947
EP  - 13953
VL  - 45
IS  - 47
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17115689&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Meng F
A1  - Paweletz CP
A1  - Mazur MT
A1  - Deyanova EG
A1  - Yates NA
A1  - Hendrickson RC
A1  - Wiener MC
A1  - Sachs JR
A1  - Burns C
A1  - Verma P
T1  - Quantitative Analysis of Complex Peptide Mixtures Using FTMS and Differential Mass Spectrometry
JO  - J Am Soc Mass Spectrom
Y1  - 2007
SP  - 226
EP  - 33
VL  - 18
IS  - 2
UR  - http://dx.doi.org/10.1016/j.jasms.2006.09.014
ER  - 

TY  - JOUR
A1  - Blagoev B
A1  - Mann M
T1  - Quantitative proteomics to study mitogen-activated protein kinases
JO  - Methods
Y1  - 2006
SP  - 243
EP  - 50
VL  - 40
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17071406&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Chengalvala MV
A1  - Meade EH Jr
A1  - Cottom JE
A1  - Hoffman WH
A1  - Shanno LK
A1  - Wu MM
A1  - Kopf GS
A1  - Shen ES
T1  - Regulation of female fertility and identification of future contraceptive targets
JO  - Curr Pharm Des
Y1  - 2006
SP  - 3915
EP  - 28
VL  - 12
IS  - 30
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17073687&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Bodzon-Kulakowska A
A1  - Bierczynska-Krzysik A
A1  - Dylag T
A1  - Drabik A
A1  - Suder P
A1  - Noga M
A1  - Jarzebinska J
A1  - Silberring J
T1  - Methods for samples preparation in proteomic research
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.10.040
ER  - 

TY  - JOUR
A1  - Widdick DA
A1  - Dilks K
A1  - Chandra G
A1  - Bottrill A
A1  - Naldrett M
A1  - Pohlschroder M
A1  - Palmer T
T1  - The twin-arginine translocation pathway is a major route of protein export in Streptomyces coelicolor
JO  - Proc Natl Acad Sci U S A
Y1  - 2006
SP  - 17927
EP  - 32
VL  - 103
IS  - 47
UR  - http://dx.doi.org/10.1073/pnas.0607025103
ER  - 

TY  - JOUR
A1  - Selbach M
A1  - Mann M
T1  - Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK)
JO  - Nat Methods
Y1  - 2006
SP  - 981
EP  - 3
VL  - 3
IS  - 12
UR  - http://dx.doi.org/10.1038/nmeth972
ER  - 

TY  - JOUR
A1  - Laughlin ST
A1  - Agard NJ
A1  - Baskin JM
A1  - Carrico IS
A1  - Chang PV
A1  - Ganguli AS
A1  - Hangauer MJ
A1  - Lo A
A1  - Prescher JA
A1  - Bertozzi CR
T1  - Metabolic labeling of glycans with azido sugars for visualization and glycoproteomics
JO  - Methods Enzymol
Y1  - 2006
SP  - 230
EP  - 50
VL  - 415
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17116478&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Gonzalez-Camacho F
A1  - Medina FJ
T1  - Extraction of nuclear proteins from root meristematic cells
JO  - Methods Mol Biol
Y1  - 2006
SP  - 63
EP  - 72
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093303&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Bradford TJ
A1  - Tomlins SA
A1  - Wang X
A1  - Chinnaiyan AM
T1  - Molecular markers of prostate cancer
JO  - Urol Oncol
Y1  - 2006
SP  - 538
EP  - 51
VL  - 24
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17138135&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Chris Taylor
T1  - A Capital Workshop for the HUPO Proteomics Standards Initiative
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3229
EP  - 3230
VL  - 5
IS  - 12
UR  - http://pubs.acs.org/subscribe/journals/jprobs/5/i12/html/1206edit.html
ER  - 

TY  - JOUR
A1  - Claus Zabel
T1  - Proteins are specifically altered in disease - really?
JO  - Expert Review of Proteomics
Y1  - 2006
SP  - 469
EP  - 470
VL  - 3
IS  - 5
UR  - http://dx.doi.org/10.1586/14789450.3.5.469
ER  - 

TY  - JOUR
A1  - Janech MG
A1  - Raymond JR
A1  - Arthur JM
T1  - Proteomics in Renal Research
JO  - Am J Physiol Renal Physiol
Y1  - 2007
SP  - F501
EP  - 12
VL  - 292
IS  - 2
UR  - http://dx.doi.org/10.1152/ajprenal.00298.2006
ER  - 

TY  - JOUR
A1  - Wang Y
A1  - Al-Gazzar A
A1  - Seibert C
A1  - Sharif A
A1  - Lane C
A1  - Griffiths WJ
T1  - Proteomic analysis of cytochromes P450: a mass spectrometry approach
JO  - Biochem Soc Trans
Y1  - 2006
SP  - 1246
EP  - 51
VL  - 34
IS  - Pt 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17073795&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Arnold RJ
A1  - Jayasankar N
A1  - Aggarwal D
A1  - Tang H
A1  - Radivojac P
T1  - A machine learning approach to predicting peptide fragmentation spectra
JO  - Pac Symp Biocomput
Y1  - 2006
SP  - 219
EP  - 30
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094241&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Wood A
A1  - Shukla A
A1  - Schneider J
A1  - Lee JS
A1  - Stanton JD
A1  - Dzuiba T
A1  - Swanson SK
A1  - Florens L
A1  - Washburn MP
A1  - Wyrick J
A1  - Bhaumik SR
A1  - Shilatifard A
T1  - Ctk complex mediated regulation of histone methylation by COMPASS
JO  - Mol Cell Biol
Y1  - 2007
SP  - 709
EP  - 20
VL  - 27
IS  - 2
UR  - http://dx.doi.org/10.1128/MCB.01627-06
ER  - 

TY  - JOUR
A1  - Huang LJ
A1  - Chen SX
A1  - Luo WJ
A1  - Jiang HH
A1  - Zhang PF
A1  - Yi H
T1  - Proteomic Analysis of Secreted Proteins of Non-small Cell Lung Cancer
JO  - Ai Zheng
Y1  - 2006
SP  - 1361
EP  - 1367
VL  - 25
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094902&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Harald Grove
A1  - Kristin Hollung
A1  - Anne Kjersti Uhlen
A1  - Harald Martens
A1  - Ellen Mosleth Færgestad
T1  - Challenges Related to Analysis of Protein Spot Volumes from Two-Dimensional Gel Electrophoresis As Revealed by Replicate Gels
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3399
EP  - 3410
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0603250
ER  - 

TY  - JOUR
A1  - Chuan-zhong Huang
A1  - Xiang-min Lin
A1  - Li-na Wu
A1  - Dan-feng Zhang
A1  - Dong Liu
A1  - San-ying Wang
A1  - Xuan-xian Peng
T1  - Systematic Identification of the Subproteome of Escherichia coli Cell Envelope Reveals the Interaction Network of Membrane Proteins and Membrane-Associated Peripheral Proteins
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3268
EP  - 3276
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060257h
ER  - 

TY  - JOUR
A1  - Yu CJ
A1  - Su CL
A1  - Tseng WL
T1  - Separation of acidic and basic proteins by nanoparticle-filled capillary electrophoresis
JO  - Anal Chem
Y1  - 2006
SP  - 8004
EP  - 10
VL  - 78
IS  - 23
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17134133&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Stubbs KA
A1  - Vocadlo DJ
T1  - Functional proteomic profiling of glycan-processing enzymes
JO  - Methods Enzymol
Y1  - 2006
SP  - 253
EP  - 68
VL  - 415
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17116479&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Denkert C
A1  - Budczies J
A1  - Kind T
A1  - Weichert W
A1  - Tablack P
A1  - Sehouli J
A1  - Niesporek S
A1  - Konsgen D
A1  - Dietel M
A1  - Fiehn O
T1  - Mass Spectrometry-Based Metabolic Profiling Reveals Different Metabolite Patterns in Invasive Ovarian Carcinomas and Ovarian Borderline Tumors
JO  - Cancer Res
Y1  - 2006
SP  - 10795
EP  - 10804
VL  - 66
IS  - 22
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17108116&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Osterhues A
A1  - Liebmann S
A1  - Schmid M
A1  - Buk D
A1  - Huss R
A1  - Graeve L
A1  - Zeindl-Eberhart E
T1  - Stem Cells and Experimental Leukemia Can Be Distinguished by Lipid Raft Protein Composition
JO  - Stem Cells Dev
Y1  - 2006
SP  - 677
EP  - 686
VL  - 15
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17105403&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Shi Y
A1  - Chen L
A1  - Liotta LA
A1  - Wan HH
A1  - Rodgers GP
T1  - Glia maturation factor gamma (GMFG): a cytokine-responsive protein during hematopoietic lineage development and its functional genomics analysis
JO  - Genomics Proteomics Bioinformatics
Y1  - 2006
SP  - 145
EP  - 55
VL  - 4
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17127212&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Harwanegg Ch
A1  - Hiller R
T1  - Protein microarrays for the diagnosis of allergic diseases: state-of-the-art and future development
JO  - Allerg Immunol (Paris)
Y1  - 2006
SP  - 232
EP  - 6
VL  - 38
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17124780&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Bloom GC
A1  - Eschrich S
A1  - Zhou JX
A1  - Coppola D
A1  - Yeatman TJ
T1  - Elucidation of a protein signature discriminating six common types of adenocarcinoma
JO  - Int J Cancer
Y1  - 2007
SP  - 769
EP  - 75
VL  - 120
IS  - 4
UR  - http://dx.doi.org/10.1002/ijc.22041
ER  - 

TY  - JOUR
A1  - Ignatenko NA
A1  - Yerushalmi HF
A1  - Watts GS
A1  - Futscher BW
A1  - Stringer DE
A1  - Marton LJ
A1  - Gerner EW
T1  - Pharmacogenomics of the Polyamine Analog 3,8,13,18-tetraaza-10,11-[(E)-1,2-cyclopropyl]eicosane Tetrahydrochloride, CGC-11093, in the Colon Adenocarcinoma Cell Line HCT1161
JO  - Technol Cancer Res Treat
Y1  - 2006
SP  - 553
EP  - 64
VL  - 5
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17121431&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Behnam K
A1  - Murray SS
A1  - Brochmann EJ
T1  - BMP Stimulation of Alkaline Phosphatase Activity in Pluripotent Mouse C2C12 Cells is Inhibited by Dermatopontin, One of the Most Abundant Low Molecular Weight Proteins in Demineralized Bone Matrix
JO  - Connect Tissue Res
Y1  - 2006
SP  - 271
EP  - 7
VL  - 47
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17118749&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Dorus S
A1  - Busby SA
A1  - Gerike U
A1  - Shabanowitz J
A1  - Hunt DF
A1  - Karr TL
T1  - Genomic and functional evolution of the Drosophila melanogaster sperm proteome
JO  - Nat Genet
Y1  - 2006
SP  - 1440
EP  - 5
VL  - 38
IS  - 12
UR  - http://dx.doi.org/10.1038/ng1915
ER  - 

TY  - JOUR
A1  - Olsen JV
A1  - Blagoev B
A1  - Gnad F
A1  - Macek B
A1  - Kumar C
A1  - Mortensen P
A1  - Mann M
T1  - Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
JO  - Cell
Y1  - 2006
SP  - 635
EP  - 648
VL  - 127
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17081983&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Muck A
A1  - Ibanez AJ
A1  - Stauber EJ
A1  - Mansourova M
A1  - Svatos A
T1  - Atmospheric molding of ionic copolymer MALDI-TOF/MS arrays: A new tool for protein identification/profiling
JO  - Electrophoresis
Y1  - 2006
SP  - 4952
EP  - 9
VL  - 27
IS  - 24
UR  - http://dx.doi.org/10.1002/elps.200600391
ER  - 

TY  - JOUR
A1  - Yuko Ogata
A1  - Carrie J. Hepplmann
A1  - M. Cristine Charlesworth
A1  - Benjamin J. Madden
A1  - Melinda N. Miller
A1  - Kimberly R. Kalli
A1  - William A. Cilby
A1  - H. Robert Bergen III
A1  - Diana A. Saggese
A1  - David C. Muddiman
T1  - Elevated Levels of Phosphorylated Fibrinogen--Isoforms and Differential Expression of Other Post-Translationally Modified Proteins in the Plasma of Ovarian Cancer Patients
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3318
EP  - 3325
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060344+
ER  - 

TY  - JOUR
A1  - Nuin PA
A1  - Wang Z
A1  - Tillier ER
T1  - The accuracy of several multiple sequence alignment programs for proteins
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17062146&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Nally JE
A1  - Whitelegge JP
A1  - Bassilian S
A1  - Blanco DR
A1  - Lovett MA
T1  - Characterization of the outer membrane proteome of Leptospira interrogans expressed during acute lethal infection
JO  - Infect Immun
Y1  - 2007
SP  - 766
EP  - 73
VL  - 75
IS  - 2
UR  - http://dx.doi.org/10.1128/IAI.00741-06
ER  - 

TY  - JOUR
A1  - Arab S
A1  - Gramolini AO
A1  - Ping P
A1  - Kislinger T
A1  - Stanley B
A1  - van Eyk J
A1  - Ouzounian M
A1  - MacLennan DH
A1  - Emili A
A1  - Liu PP
T1  - Cardiovascular proteomics: tools to develop novel biomarkers and potential applications
JO  - J Am Coll Cardiol
Y1  - 2006
SP  - 1733
EP  - 41
VL  - 48
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17084242&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Heinemeyer J
A1  - Lewejohann D
A1  - Braun HP
T1  - Blue-native gel electrophoresis for the characterization of protein complexes in plants
JO  - Methods Mol Biol
Y1  - 2006
SP  - 343
EP  - 52
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093321&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Gillet S
A1  - Decottignies P
A1  - Chardonnet S
A1  - Le Marechal P
T1  - Cadmium response and redoxin targets in Chlamydomonas reinhardtii: a proteomic approach
JO  - Photosynth Res
Y1  - 2006
SP  - 201
EP  - 11
VL  - 89
IS  - 2-3
UR  - http://dx.doi.org/10.1007/s11120-006-9108-2
ER  - 

TY  - JOUR
A1  - Kalenka A
A1  - Feldmann RE Jr
A1  - Otero K
A1  - Maurer MH
A1  - Waschke KF
A1  - Fiedler F
T1  - Changes in the serum proteome of patients with sepsis and septic shock
JO  - Anesth Analg
Y1  - 2006
SP  - 1522
EP  - 6
VL  - 103
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17122233&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Sewell DA
A1  - Yuan CX
A1  - Robertson E
T1  - Proteomic Signatures in Laryngeal Squamous Cell Carcinoma
JO  - ORL J Otorhinolaryngol Relat Spec
Y1  - 2006
SP  - 77
EP  - 84
VL  - 69
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17127822&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Florens L
A1  - Carozza MJ
A1  - Swanson SK
A1  - Fournier M
A1  - Coleman MK
A1  - Workman JL
A1  - Washburn MP
T1  - Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors
JO  - Methods
Y1  - 2006
SP  - 303
EP  - 11
VL  - 40
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17101441&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Rodriguez-Pineiro AM
A1  - Rodriguez-Berrocal FJ
A1  - Paez de la Cadena M
T1  - Improvements in the search for potential biomarkers by proteomics: Application of principal component and discriminant analyses for two-dimensional maps evaluation
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.09.021
ER  - 

TY  - JOUR
A1  - Park JW
A1  - Song JY
A1  - Lee SG
A1  - Jun JS
A1  - Park JU
A1  - Chung MJ
A1  - Ju JS
A1  - Nizamutdinov D
A1  - Chang MW
A1  - Youn HS
A1  - Kang HL
A1  - Baik SC
A1  - Lee WK
A1  - Cho MJ
A1  - Rhee KH
T1  - Quantitative Analysis of Representative Proteome Components and Clustering of Helicobacter pylori Clinical Strains
JO  - Helicobacter
Y1  - 2006
SP  - 533
EP  - 43
VL  - 11
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17083375&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Nagarajan V
A1  - Kaushik N
A1  - Murali B
A1  - Zhang C
A1  - Lakhera S
A1  - Elasri MO
A1  - Deng Y
T1  - A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17118141&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Fernandez-Acero FJ
A1  - Jorge I
A1  - Calvo E
A1  - Vallejo I
A1  - Carbu M
A1  - Camafeita E
A1  - Garrido C
A1  - Lopez JA
A1  - Jorrin J
A1  - Cantoral JM
T1  - Proteomic analysis of phytopathogenic fungus Botrytis cinerea as a potential tool for identifying pathogenicity factors, therapeutic targets and for basic research
JO  - Arch Microbiol
Y1  - 2007
SP  - 207
EP  - 15
VL  - 187
IS  - 3
UR  - http://dx.doi.org/10.1007/s00203-006-0188-3
ER  - 

TY  - JOUR
A1  - Richard J. Jacob and Rainer Cramer
T1  - PIGOK: Linking Protein Identity to Gene Ontology and Function
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3429
EP  - 3432
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0601537
ER  - 

TY  - JOUR
A1  - Gogichaeva NV
A1  - Williams T
A1  - Alterman MA
T1  - MALDI TOF/TOF Tandem Mass Spectrometry as a New Tool for Amino Acid Analysis
JO  - J Am Soc Mass Spectrom
Y1  - 2007
SP  - 279
EP  - 84
VL  - 18
IS  - 2
UR  - http://dx.doi.org/10.1016/j.jasms.2006.09.013
ER  - 

TY  - JOUR
A1  - Kersten B
A1  - Feilner T
T1  - Generation of plant protein microarrays and investigation of antigen-antibody interactions
JO  - Methods Mol Biol
Y1  - 2006
SP  - 365
EP  - 78
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093323&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Nanney LB
A1  - Caldwell RL
A1  - Pollins AC
A1  - Cardwell NL
A1  - Opalenik SR
A1  - Davidson JM
T1  - Novel approaches for understanding the mechanisms of wound repair
JO  - J Investig Dermatol Symp Proc
Y1  - 2006
SP  - 132
EP  - 9
VL  - 11
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17069021&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Trcka J
A1  - Kunz M
T1  - Functional genome and proteome analyses of cutaneous autoimmune diseases
JO  - Curr Pharm Des
Y1  - 2006
SP  - 3787
EP  - 98
VL  - 12
IS  - 29
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17073677&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Scherl A
A1  - Francois P
A1  - Charbonnier Y
A1  - Deshusses JM
A1  - Koessler T
A1  - Huyghe A
A1  - Bento M
A1  - Stahl-Zeng J
A1  - Fischer A
A1  - Masselot A
A1  - Vaezzadeh A
A1  - Galle F
A1  - Renzoni A
A1  - Vaudaux P
A1  - Lew D
A1  - Zimmermann-Ivol CG
A1  - Binz PA
A1  - Sanchez JC
A1  - Hochstrasser DF
A1  - Schrenzel J
T1  - Exploring glycopeptide resistance in Staphylococcus aureus: a combined proteomics and transcriptomics approach for the identification of resistance related markers
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17121677&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Dotzlaw H
A1  - Eggert M
A1  - Neeck G
A1  - Schulz M
T1  - Spots, blots, peaks and chips: proteomic approaches in autoimmune diseases
JO  - Curr Pharm Des
Y1  - 2006
SP  - 3699
EP  - 706
VL  - 12
IS  - 29
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17073669&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Bakermans C
A1  - Tollaksen SL
A1  - Giometti CS
A1  - Wilkerson C
A1  - Tiedje JM
A1  - Thomashow MF
T1  - Proteomic analysis of Psychrobacter cryohalolentis K5 during growth at subzero temperatures
JO  - Extremophiles
Y1  - 2007
SP  - 343
EP  - 54
VL  - 11
IS  - 2
UR  - http://dx.doi.org/10.1007/s00792-006-0042-1
ER  - 

TY  - JOUR
A1  - Faurobert M
A1  - Pelpoir E
A1  - Chaib J
T1  - Phenol extraction of proteins for proteomic studies of recalcitrant plant tissues
JO  - Methods Mol Biol
Y1  - 2006
SP  - 9
EP  - 14
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093297&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Katayama M
A1  - Nakano H
A1  - Ishiuchi A
A1  - Wu W
A1  - Oshima R
A1  - Sakurai J
A1  - Nishikawa H
A1  - Yamaguchi S
A1  - Otsubo T
T1  - Protein pattern difference in the colon cancer cell lines examined by two-dimensional differential in-gel electrophoresis and mass spectrometry
JO  - Surg Today
Y1  - 2006
SP  - 1085
EP  - 93
VL  - 36
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17123137&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Liu C
A1  - Zhang X
T1  - Multidimensional capillary array liquid chromatography and matrix-assisted laser desorption/ionization tandem mass spectrometry for high-throughput proteomic analysis
JO  - J Chromatogr A
Y1  - 2007
SP  - 191
EP  - 8
VL  - 1139
IS  - 2
UR  - http://dx.doi.org/10.1016/j.chroma.2006.11.019
ER  - 

TY  - JOUR
A1  - Kang S
A1  - Kim EY
A1  - Bahn YJ
A1  - Chung JW
A1  - Lee DH
A1  - Park SG
A1  - Yoon TS
A1  - Park BC
A1  - Bae KH
T1  - A proteomic analysis of the effect of mapk pathway activation on l-glutamate-induced neuronal cell death
JO  - Cell Mol Biol Lett
Y1  - 2007
SP  - 139
EP  - 47
VL  - 12
IS  - 1
UR  - http://dx.doi.org/10.2478/s11658-006-0057-8
ER  - 

TY  - JOUR
A1  - Gontarev S
A1  - Shmanai V
A1  - Frey SK
A1  - Kvach M
A1  - Schweigert FJ
T1  - Application of phenylboronic acid modified hydrogel affinity chips for high-throughput mass spectrometric analysis of glycated proteins
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 1
EP  - 6
VL  - 21
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17125156&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Mazanec K
A1  - Slais K
A1  - Chmelik J
T1  - Mass spectrometric characterization of low-molecular-mass color pI markers and their use for direct determination of pI value of proteins
JO  - J Mass Spectrom
Y1  - 2006
SP  - 1570
EP  - 1577
VL  - 41
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17136763&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Oh C
A1  - Zak SH
A1  - Mirzaei H
A1  - Buck C
A1  - Regnier FE
A1  - Zhang X
T1  - Neural network prediction of peptide separation in strong anion exchange chromatography
JO  - Bioinformatics
Y1  - 2007
SP  - 114
EP  - 8
VL  - 23
IS  - 1
UR  - http://dx.doi.org/10.1093/bioinformatics/btl561
ER  - 

TY  - JOUR
A1  - Kosaku Shinoda
A1  - Masahiro Sugimoto
A1  - Nozomu Yachie
A1  - Naoyuki Sugiyama
A1  - Takeshi Masuda
A1  - Martin Robert
A1  - Tomoyoshi Soga
A1  - Masaru Tomita
T1  - Prediction of Liquid Chromatographic Retention Times of Peptides Generated by Protease Digestion of the Escherichia coli Proteome Using Artificial Neural Networks
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3312
EP  - 3317
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0602038
ER  - 

TY  - JOUR
A1  - Czibere A
A1  - Grall F
A1  - Aivado M
T1  - Perspectives of proteomics in acute myeloid leukemia
JO  - Expert Rev Anticancer Ther
Y1  - 2006
SP  - 1663
EP  - 75
VL  - 6
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17134369&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Eubel H
A1  - Heazlewood JL
A1  - Millar AH
T1  - Isolation and subfractionation of plant mitochondria for proteomic analysis
JO  - Methods Mol Biol
Y1  - 2006
SP  - 49
EP  - 62
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093302&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Petricoin EF
A1  - Belluco C
A1  - Araujo RP
A1  - Liotta LA
T1  - The blood peptidome: a higher dimesion of information content for cancer biomarker discovery
JO  - Nat Rev Cancer
Y1  - 2006
SP  - 961
EP  - 7
VL  - 6
IS  - 12
UR  - http://dx.doi.org/10.1038/nrc2011
ER  - 

TY  - JOUR
A1  - Tinette S
A1  - Feyereisen R
A1  - Robichon A
T1  - Approach to systematic analysis of serine/threonine phosphoproteome using Beta elimination and subsequent side effects: Intramolecular linkage and/or racemisation
JO  - J Cell Biochem
Y1  - 2007
SP  - 875
EP  - 82
VL  - 100
IS  - 4
UR  - http://dx.doi.org/10.1002/jcb.21070
ER  - 

TY  - JOUR
A1  - Komatsu S
T1  - Extraction of nuclear proteins
JO  - Methods Mol Biol
Y1  - 2006
SP  - 73
EP  - 8
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093304&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Morris RM
A1  - Fung JM
A1  - Rahm BG
A1  - Zhang S
A1  - Freedman DL
A1  - Zinder SH
A1  - Richardson RE
T1  - Comparative proteomics of Dehalococcoides reveals strain-specific peptides associated with activity
JO  - Appl Environ Microbiol
Y1  - 2007
SP  - 320
EP  - 6
VL  - 73
IS  - 1
UR  - http://dx.doi.org/10.1128/AEM.02129-06
ER  - 

TY  - JOUR
A1  - Vaziri B
A1  - Rahimpour M
A1  - Eslami N
A1  - Fayaz A
A1  - Rahimian H
T1  - RP-HPLC prefractionation and its application in expressional proteomics analysis of an in vitro viral infection model
JO  - J Sep Sci
Y1  - 2006
SP  - 2284
EP  - 91
VL  - 29
IS  - 15
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17120811&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Sommerer N
A1  - Centeno D
A1  - Rossignol M
T1  - Peptide mass fingerprinting: identification of proteins by maldi-tof
JO  - Methods Mol Biol
Y1  - 2006
SP  - 219
EP  - 34
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093314&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Hamelin M
A1  - Sayd T
A1  - Chambon C
A1  - Bouix J
A1  - Bibe B
A1  - Milenkovic D
A1  - Leveziel H
A1  - Georges M
A1  - Clop A
A1  - Marinova P
A1  - Laville E
T1  - Proteomic analysis of ovine muscle hypertrophy
JO  - J Anim Sci
Y1  - 2006
SP  - 3266
EP  - 76
VL  - 84
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093219&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Weinreb O
A1  - Drigues N
A1  - Sagi Y
A1  - Reznick AZ
A1  - Amit T
A1  - Youdim MB
T1  - The Application of Proteomics and Genomics to the Study of Age-Related Neurodegeneration and Neuroprotection
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1089/ars.2007.9.ft-2
ER  - 

TY  - JOUR
A1  - El-Aneed A
A1  - Banoub J
T1  - Proteomics in the diagnosis of hepatocellular carcinoma: focus on high risk hepatitis B and C patients
JO  - Anticancer Res
Y1  - 2006
SP  - 3293
EP  - 300
VL  - 26
IS  - 5A
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094443&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Weidanz JA
A1  - Piazza P
A1  - Hickman-Miller H
A1  - Woodburn D
A1  - Nguyen T
A1  - Wahl A
A1  - Neethling F
A1  - Chiriva-Internati M
A1  - Rinaldo CR
A1  - Hildebrand WH
T1  - Development and implementation of a direct detection, quantitation and validation system for class I MHC self-peptide epitopes
JO  - J Immunol Methods
Y1  - 2007
SP  - 47
EP  - 58
VL  - 318
IS  - 1-2
UR  - http://dx.doi.org/10.1016/j.jim.2006.09.019
ER  - 

TY  - JOUR
A1  - Sung Chan Kim
A1  - Yue Chen
A1  - Shama Mirza
A1  - Yingda Xu
A1  - Jaeick Lee
A1  - Pingsheng Liu
A1  - Yingming Zhao
T1  - A Clean, More Efficient Method for In-Solution Digestion of Protein Mixtures without Detergent or Urea
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3446
EP  - 3452
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0603396
ER  - 

TY  - JOUR
A1  - Liu BC
A1  - Zhang L
A1  - Lv LL
A1  - Wang YL
A1  - Liu DG
A1  - Zhang XL
T1  - Application of Antibody Array Technology in the Analysis of Urinary Cytokine Profiles in Patients with Chronic Kidney Disease
JO  - Am J Nephrol
Y1  - 2006
SP  - 483
EP  - 490
VL  - 26
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17095863&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Jennison AV
A1  - Raqib R
A1  - Verma NK
T1  - Immunoproteome analysis of soluble and membrane proteins of Shigella flexneri 2457T
JO  - World J Gastroenterol
Y1  - 2006
SP  - 6683
EP  - 8
VL  - 12
IS  - 41
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17075984&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Wingren C
A1  - Borrebaeck CA
T1  - Antibody microarrays: current status and key technological advances
JO  - OMICS
Y1  - 2006
SP  - 411
EP  - 27
VL  - 10
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17069517&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Aarti Pandey
A1  - Mani Kant Choudhary
A1  - Deepti Bhushan
A1  - Arnab Chattopadhyay
A1  - Subhra Chakraborty
A1  - Asis Datta
A1  - Niranjan Chakraborty
T1  - The Nuclear Proteome of Chickpea (Cicer arietinum L.) Reveals Predicted and Unexpected Proteins
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3301
EP  - 3311
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060147a
ER  - 

TY  - JOUR
A1  - Hasegawa N
A1  - Mizutani K
A1  - Suzuki T
A1  - Deguchi T
A1  - Nozawa Y
T1  - A Comparative Study of Protein Profiling by Proteomic Analysis in Camptothecin-Resistant PC3 and Camptothecin-Sensitive LNCaP Human Prostate Cancer Cells
JO  - Urol Int
Y1  - 2006
SP  - 347
EP  - 54
VL  - 77
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17135786&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Seungjin Na and Eunok Paek
T1  - Quality Assessment of Tandem Mass Spectra Based on Cumulative Intensity Normalization
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3241
EP  - 3248
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr0603248
ER  - 

TY  - JOUR
A1  - Demasi MA
A1  - Montor WR
A1  - Ferreira GB
A1  - Pimenta DC
A1  - Labriola L
A1  - Sogayar MC
T1  - Differential proteomic analysis of the anti-proliferative effect of glucocorticoid hormones in ST1 rat glioma cells
JO  - J Steroid Biochem Mol Biol
Y1  - 2007
SP  - 137
EP  - 48
VL  - 103
IS  - 2
UR  - http://dx.doi.org/10.1016/j.jsbmb.2006.08.004
ER  - 

TY  - JOUR
A1  - Koen YM
A1  - Yue W
A1  - Galeva NA
A1  - Williams TD
A1  - Hanzlik RP
T1  - Site-Specific Arylation of Rat Glutathione S-Transferase A1 and A2 by Bromobenzene Metabolites in Vivo
JO  - Chem Res Toxicol
Y1  - 2006
SP  - 1426
EP  - 1434
VL  - 19
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17112229&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Axel Siroy
A1  - Pascal Cosette
A1  - Damien Seyer
A1  - Christelle Lemaître-Guillier
A1  - David Vallenet
A1  - Alain Van Dorsselaer
A1  - Sophie Boyer-Mariotte
A1  - Thierry Jouenne
A1  - Emmanuelle Dé
T1  - Global Comparison of the Membrane Subproteomes between a Multidrug-Resistant Acinetobacter baumannii Strain and a Reference Strain
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3385
EP  - 3398
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060372s
ER  - 

TY  - JOUR
A1  - Chich JF
A1  - David O
A1  - Villers F
A1  - Schaeffer B
A1  - Lutomski D
A1  - Huet S
T1  - Statistics for proteomics: Experimental design and 2-DE differential analysis
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.09.033
ER  - 

TY  - JOUR
A1  - Siddique MA
A1  - Grossmann J
A1  - Gruissem W
A1  - Baginsky S
T1  - Proteome analysis of bell pepper (Capsicum annum L.) chromoplasts
JO  - Plant Cell Physiol
Y1  - 2006
SP  - 1663
EP  - 73
VL  - 47
IS  - 12
UR  - http://dx.doi.org/10.1093/pcp/pcl033
ER  - 

TY  - JOUR
A1  - van Wijk KJ
A1  - Peltier JB
A1  - Giacomelli L
T1  - Isolation of Chloroplast Proteins from Arabidopsis thaliana for Proteome Analysis
JO  - Methods Mol Biol
Y1  - 2006
SP  - 43
EP  - 8
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093301&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Matsumura T
A1  - Suzuki T
A1  - Kada N
A1  - Aizawa K
A1  - Munemasa Y
A1  - Nagai R
T1  - Differential serum proteomic analysis in a model of metabolic disease
JO  - Biochem Biophys Res Commun
Y1  - 2006
SP  - 965
EP  - 971
VL  - 351
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17097053&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Turkina MV
A1  - Vener AV
T1  - Identification of phosphorylated proteins
JO  - Methods Mol Biol
Y1  - 2006
SP  - 305
EP  - 16
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093319&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Vaishnav RA
A1  - Getchell ML
A1  - Poon HF
A1  - Barnett KR
A1  - Hunter SA
A1  - Pierce WM
A1  - Klein JB
A1  - Butterfield DA
A1  - Getchell TV
T1  - Oxidative stress in the aging murine olfactory bulb: Redox proteomics and cellular localization
JO  - J Neurosci Res
Y1  - 2007
SP  - 373
EP  - 85
VL  - 85
IS  - 2
UR  - http://dx.doi.org/10.1002/jnr.21130
ER  - 

TY  - JOUR
A1  - Collins AM
A1  - Caperna TJ
A1  - Williams V
A1  - Garrett WM
A1  - Evans JD
T1  - Proteomic analyses of male contributions to honey bee sperm storage and mating
JO  - Insect Mol Biol
Y1  - 2006
SP  - 541
EP  - 9
VL  - 15
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17069630&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Costello LC
A1  - Franklin RB
T1  - Tumor cell metabolism: the marriage of molecular genetics and proteomics with cellular intermediary metabolism; proceed with caution!
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17090311&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Dowling P
A1  - Meleady P
A1  - Dowd A
A1  - Henry M
A1  - Glynn S
A1  - Clynes M
T1  - Proteomic analysis of isolated membrane fractions from superinvasive cancer cells
JO  - Biochim Biophys Acta
Y1  - 2007
SP  - 93
EP  - 101
VL  - 1774
IS  - 1
UR  - http://dx.doi.org/10.1016/j.bbapap.2006.09.014
ER  - 

TY  - JOUR
A1  - Stefan Schaub
A1  - John A Wilkins
A1  - David Rush
A1  - Peter Nickerson
T1  - Developing a tool for noninvasive monitoring of renal allografts
JO  - Expert Review of Proteomics
Y1  - 2006
SP  - 497
EP  - 509
VL  - 3
IS  - 5
UR  - http://dx.doi.org/10.1586/14789450.3.5.497
ER  - 

TY  - JOUR
A1  - Matsuo K
A1  - Xiang Y
A1  - Nakamura H
A1  - Masuko K
A1  - Yudoh K
A1  - Noyori K
A1  - Nishioka K
A1  - Saito T
A1  - Kato T
T1  - Identification of Novel Citrullinated Autoantigens of Synovium in Rheumatoid Arthritis Using a Proteomic Approach
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17125526&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Peng X
T1  - Developing and evaluating genomics- or proteomics-based diagnostic tests: statistical perspectives
JO  - Methods Mol Med
Y1  - 2006
SP  - 27
EP  - 39
VL  - 129
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17085803&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Wang Y
A1  - He QY
A1  - Chen H
A1  - Chiu JF
T1  - Synergistic effects of retinoic acid and tamoxifen on human breast cancer cells: Proteomic characterization
JO  - Exp Cell Res
Y1  - 2007
SP  - 357
EP  - 68
VL  - 313
IS  - 2
UR  - http://dx.doi.org/10.1016/j.yexcr.2006.10.016
ER  - 

TY  - JOUR
A1  - Mitulovic G
A1  - Mechtler K
T1  - HPLC techniques for proteomics analysis--a short overview of latest developments
JO  - Brief Funct Genomic Proteomic
Y1  - 2006
SP  - 249
EP  - 60
VL  - 5
IS  - 4
UR  - http://dx.doi.org/10.1093/bfgp/ell034
ER  - 

TY  - JOUR
A1  - Falkner JA
A1  - Falkner JW
A1  - Andrews PC
T1  - ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats
JO  - Bioinformatics
Y1  - 2007
SP  - 262
EP  - 3
VL  - 23
IS  - 2
UR  - http://dx.doi.org/10.1093/bioinformatics/btl573
ER  - 

TY  - JOUR
A1  - Oh SJ
A1  - Hong BJ
A1  - Choi KY
A1  - Park JW
T1  - Surface modification for DNA and protein microarrays
JO  - OMICS
Y1  - 2006
SP  - 327
EP  - 43
VL  - 10
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17069511&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Heazlewood JL
A1  - Verboom RE
A1  - Tonti-Filippini J
A1  - Small I
A1  - Millar AH
T1  - SUBA: the Arabidopsis Subcellular Database
JO  - Nucleic Acids Res
Y1  - 2007
SP  - D213
EP  - 8
VL  - 35
IS  - Database issue
UR  - http://dx.doi.org/10.1093/nar/gkl863
ER  - 

TY  - JOUR
A1  - Kuo-Chen Chou and Hong-Bin Shen
T1  - Large-Scale Predictions of Gram-Negative Bacterial Protein Subcellular Locations
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3420
EP  - 3428
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060404b
ER  - 

TY  - JOUR
A1  - Deng SS
A1  - Xing TY
A1  - Zhou HY
A1  - Xiong RH
A1  - Lu YG
A1  - Wen B
A1  - Liu SQ
A1  - Yang HJ
T1  - Comparative proteome analysis of breast cancer and adjacent normal breast tissues in human
JO  - Genomics Proteomics Bioinformatics
Y1  - 2006
SP  - 165
EP  - 72
VL  - 4
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17127214&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Spickett CM
A1  - Pitt AR
A1  - Morrice N
A1  - Kolch W
T1  - Proteomic analysis of phosphorylation, oxidation and nitrosylation in signal transduction
JO  - Biochim Biophys Acta
Y1  - 2006
SP  - 1823
EP  - 41
VL  - 1764
IS  - 12
UR  - http://dx.doi.org/10.1016/j.bbapap.2006.09.013
ER  - 

TY  - JOUR
A1  - Coleman SA
A1  - Fischer ER
A1  - Cockrell DC
A1  - Voth DE
A1  - Howe D
A1  - Mead DJ
A1  - Samuel JE
A1  - Heinzen RA
T1  - Proteome and Antigen Profiling of Coxiella burnetii Developmental Forms
JO  - Infect Immun
Y1  - 2007
SP  - 290
EP  - 8
VL  - 75
IS  - 1
UR  - http://dx.doi.org/10.1128/IAI.00883-06
ER  - 

TY  - JOUR
A1  - Olden K
T1  - Toxicogenomics--A New Systems Toxicology Approach to Understanding of Gene-Environment Interactions
JO  - Ann N Y Acad Sci
Y1  - 2006
SP  - 703
EP  - 706
VL  - 1076
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17119247&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Hamid Mirzaei and Fred Regnier
T1  - Protein-RNA Cross-Linking in the Ribosomes of Yeast under Oxidative Stress
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3249
EP  - 3259
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060337l
ER  - 

TY  - JOUR
A1  - Lessner DJ
A1  - Li L
A1  - Li Q
A1  - Rejtar T
A1  - Andreev VP
A1  - Reichlen M
A1  - Hill K
A1  - Moran JJ
A1  - Karger BL
A1  - Ferry JG
T1  - An unconventional pathway for reduction of CO2 to methane in CO-grown Methanosarcina acetivorans revealed by proteomics
JO  - Proc Natl Acad Sci U S A
Y1  - 2006
SP  - 17921
EP  - 6
VL  - 103
IS  - 47
UR  - http://dx.doi.org/10.1073/pnas.0608833103
ER  - 

TY  - JOUR
A1  - Thompson AH
A1  - Bjourson AJ
A1  - Shaw C
A1  - McClean S
T1  - Bradykinin-related peptides from Phyllomedusa hypochondrialis azurea: mass spectrometric structural characterisation and cloning of precursor cDNAs
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 3780
EP  - 3788
VL  - 20
IS  - 24
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17120273&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Kim JK
A1  - Bamba T
A1  - Harada K
A1  - Fukusaki E
A1  - Kobayashi A
T1  - Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment
JO  - J Exp Bot
Y1  - 2007
SP  - 415
EP  - 24
VL  - 58
IS  - 3
UR  - http://dx.doi.org/10.1093/jxb/erl216
ER  - 

TY  - JOUR
A1  - Hinou H
A1  - Kurogochi M
A1  - Nishimura S
T1  - Mechanism-based inhibitors to probe transitional States of glycoside hydrolases
JO  - Methods Enzymol
Y1  - 2006
SP  - 202
EP  - 12
VL  - 415
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17116476&dopt=Abstract
ER  - 

TY  - JOUR
A1  - de Noo ME
A1  - Tollenaar RA
A1  - Deelder AM
A1  - Bouwman LH
T1  - Current status and prospects of clinical proteomics studies on detection of colorectal cancer: Hopes and fears
JO  - World J Gastroenterol
Y1  - 2006
SP  - 6594
EP  - 601
VL  - 12
IS  - 41
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17075970&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Dias GS
A1  - Oliveira JL
A1  - Vicente J
A1  - Martin-Sanchez F
T1  - Integrating Medical and Genomic Data: a Sucessful Example for Rare Diseases
JO  - Stud Health Technol Inform
Y1  - 2006
SP  - 125
EP  - 130
VL  - 124
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17108515&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Pierre-Olivier Angrand
A1  - Inmaculada Segura
A1  - Pamela Volkel
A1  - Sonja Ghidelli
A1  - Rebecca Terry
A1  - Miro Brajenovic
A1  - Kristina Vintersten
A1  - Rudiger Klein
A1  - Giulio Superti-Furga
A1  - Gerard Drewes
A1  - Bernhard Kuster
A1  - Tewis Bouwmeester
A1  - Amparo Acker-Palmer
T1  - Transgenic Mouse Proteomics Identifies New 14-3-3-associated Proteins Involved in Cytoskeletal Rearrangements and Cell Signaling
JO  - Mol Cell Proteomics
Y1  - 2006
SP  - 2211
EP  - 2227
VL  - 5
IS  - 12
UR  - http://www.mcponline.org/cgi/content/abstract/5/12/2211?etoc
ER  - 

TY  - JOUR
A1  - Hye A
A1  - Lynham S
A1  - Thambisetty M
A1  - Causevic M
A1  - Campbell J
A1  - Byers HL
A1  - Hooper C
A1  - Rijsdijk F
A1  - Tabrizi SJ
A1  - Banner S
A1  - Shaw CE
A1  - Foy C
A1  - Poppe M
A1  - Archer N
A1  - Hamilton G
A1  - Powell J
A1  - Brown RG
A1  - Sham P
A1  - Ward M
A1  - Lovestone S
T1  - Proteome-based plasma biomarkers for Alzheimer's disease
JO  - Brain
Y1  - 2006
SP  - 3042
EP  - 50
VL  - 129
IS  - Pt 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17071923&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Williams TI
A1  - Combs JC
A1  - Lynn BC
A1  - Strobel HJ
T1  - Proteomic profile changes in membranes of ethanol-tolerant Clostridium thermocellum
JO  - Appl Microbiol Biotechnol
Y1  - 2007
SP  - 422
EP  - 32
VL  - 74
IS  - 2
UR  - http://dx.doi.org/10.1007/s00253-006-0689-7
ER  - 

TY  - JOUR
A1  - Ota S
A1  - Miyazaki S
A1  - Matsuoka H
A1  - Morisato K
A1  - Shintani Y
A1  - Nakanishi K
T1  - High-throughput protein digestion by trypsin-immobilized monolithic silica with pipette-tip formula
JO  - J Biochem Biophys Methods
Y1  - 2007
SP  - 57
EP  - 62
VL  - 70
IS  - 1
UR  - http://dx.doi.org/10.1016/j.jbbm.2006.10.005
ER  - 

TY  - JOUR
A1  - Kim SJ
A1  - Kweon O
A1  - Jones RC
A1  - Freeman JP
A1  - Edmondson RD
A1  - Cerniglia CE
T1  - Complete and Integrated Pyrene Degradation Pathway in Mycobacterium vanbaalenii PYR-1 Based on Systems Biology
JO  - J Bacteriol
Y1  - 2007
SP  - 464
EP  - 72
VL  - 189
IS  - 2
UR  - http://dx.doi.org/10.1128/JB.01310-06
ER  - 

TY  - JOUR
A1  - Zivy M
T1  - Quantitative Analysis of 2D Gels
JO  - Methods Mol Biol
Y1  - 2006
SP  - 175
EP  - 94
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093311&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Jazii FR
A1  - Najafi Z
A1  - Malekzadeh R
A1  - Conrads TP
A1  - Ziaee AA
A1  - Abnet C
A1  - Yazdznbod M
A1  - Karkhane AA
A1  - Salekdeh GH
T1  - Identification of squamous cell carcinoma associated proteins by proteomics and loss of beta tropomyosin expression in esophageal cancer
JO  - World J Gastroenterol
Y1  - 2006
SP  - 7104
EP  - 12
VL  - 12
IS  - 44
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17131471&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Chen W
A1  - Shen J
A1  - Yin X
A1  - Yu Y
T1  - Optimization of microfabricated nanoliter-scale solid-phase extraction device for detection of gel-separated proteins in low abundance by matrix-assisted laser desorption/ionization mass spectrometry
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 35
EP  - 43
VL  - 21
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17133336&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Dupont CL
A1  - Yang S
A1  - Palenik B
A1  - Bourne PE
T1  - Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry
JO  - Proc Natl Acad Sci U S A
Y1  - 2006
SP  - 17822
EP  - 7
VL  - 103
IS  - 47
UR  - http://dx.doi.org/10.1073/pnas.0605798103
ER  - 

TY  - JOUR
A1  - Krokhin OV
T1  - Sequence-Specific Retention Calculator. Algorithm for Peptide Retention Prediction in Ion-Pair RP-HPLC: Application to 300- and 100-A Pore Size C18 Sorbents
JO  - Anal Chem
Y1  - 2006
SP  - 7785
EP  - 7795
VL  - 78
IS  - 22
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17105172&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Nardone G
A1  - Rippa E
A1  - Martin G
A1  - Rocco A
A1  - Siciliano RA
A1  - Fiengo A
A1  - Cacace G
A1  - Malorni A
A1  - Budillon G
A1  - Arcari P
T1  - Gastrokine 1 expression in patients with and without Helicobacter pylori infection
JO  - Dig Liver Dis
Y1  - 2007
SP  - 122
EP  - 9
VL  - 39
IS  - 2
UR  - http://dx.doi.org/10.1016/j.dld.2006.09.017
ER  - 

TY  - JOUR
A1  - Higdon R
A1  - Kolker E
T1  - A predictive model for identifying proteins by a single peptide match
JO  - Bioinformatics
Y1  - 2007
SP  - 277
EP  - 80
VL  - 23
IS  - 3
UR  - http://dx.doi.org/10.1093/bioinformatics/btl595
ER  - 

TY  - JOUR
A1  - Vukic Soskic
A1  - Gerhard Schwall
A1  - Elke Nyakatura
A1  - Slobodan Poznanovic
A1  - Werner Stegmann
A1  - Andre Schrattenholz
T1  - Hexadecanedionic Acid-Sepharose 4B: A New Tool for Preparation of Albumin-Depleted Plasma
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3453
EP  - 3458
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060387q
ER  - 

TY  - JOUR
A1  - Hendrickson EL
A1  - Xia Q
A1  - Wang T
A1  - Leigh JA
A1  - Hackett M
T1  - Comparison of spectral counting and metabolic stable isotope labeling for use with quantitative microbial proteomics
JO  - Analyst
Y1  - 2006
SP  - 1335
EP  - 41
VL  - 131
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17124542&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Sundsten T
A1  - Eberhardson M
A1  - Goransson M
A1  - Bergsten P
T1  - The use of proteomics in identifying differentially expressed serum proteins in humans with type 2 diabetes
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1186/1477-5956-4-22
ER  - 

TY  - JOUR
A1  - Zhao J
A1  - Yeong LH
A1  - Wong WS
T1  - Dexamethasone Alters Bronchoalveolar Lavage Fluid Proteome in a Mouse Asthma Model
JO  - Int Arch Allergy Immunol
Y1  - 2006
SP  - 219
EP  - 229
VL  - 142
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17108703&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Fujita Y
A1  - Nakanishi T
A1  - Hiramatsu M
A1  - Mabuchi H
A1  - Miyamoto Y
A1  - Miyamoto A
A1  - Shimizu A
A1  - Tanigawa N
T1  - Proteomics-Based Approach Identifying Autoantibody against Peroxiredoxin VI as a Novel Serum Marker in Esophageal Squamous Cell Carcinoma
JO  - Clin Cancer Res
Y1  - 2006
SP  - 6415
EP  - 20
VL  - 12
IS  - 21
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17085654&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Kicman AT
A1  - Parkin MC
A1  - Iles RK
T1  - An introduction to mass spectrometry based proteomics-Detection and characterization of gonadotropins and related molecules
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.mce.2006.02.022
ER  - 

TY  - JOUR
A1  - Kim A. Woodrow
A1  - Isoken O. Airen
A1  - James R. Swartz
T1  - Rapid Expression of Functional Genomic Libraries
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3288
EP  - 3300
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr050459y
ER  - 

TY  - JOUR
A1  - Zakharkin SO
A1  - Kim K
A1  - Bartolucci AA
A1  - Page GP
A1  - Allison DB
T1  - Optimal allocation of replicates for measurement evaluation studies
JO  - Genomics Proteomics Bioinformatics
Y1  - 2006
SP  - 196
EP  - 202
VL  - 4
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17127218&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Borner GH
A1  - Harbour M
A1  - Hester S
A1  - Lilley KS
A1  - Robinson MS
T1  - Comparative proteomics of clathrin-coated vesicles
JO  - J Cell Biol
Y1  - 2006
SP  - 571
EP  - 8
VL  - 175
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17116749&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Hu S
A1  - Li Y
A1  - Wang J
A1  - Xie Y
A1  - Tjon K
A1  - Wolinsky L
A1  - Loo RR
A1  - Loo JA
A1  - Wong DT
T1  - Human saliva proteome and transcriptome
JO  - J Dent Res
Y1  - 2006
SP  - 1129
EP  - 33
VL  - 85
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17122167&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Verrills NM
T1  - Clinical proteomics: present and future prospects
JO  - Clin Biochem Rev
Y1  - 2006
SP  - 99
EP  - 116
VL  - 27
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17077880&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Roth U
A1  - von Roepenack-Lahaye E
A1  - Clemens S
T1  - Proteome changes in Arabidopsis thaliana roots upon exposure to Cd2+
JO  - J Exp Bot
Y1  - 2006
SP  - 4003
EP  - 13
VL  - 57
IS  - 15
UR  - http://dx.doi.org/10.1093/jxb/erl170
ER  - 

TY  - JOUR
A1  - Xin L
A1  - Cao WX
A1  - Fei XF
A1  - Wang Y
A1  - Liu WT
A1  - Liu BY
A1  - Zhu ZG
T1  - Applying proteomic methodologies to analyze the effect of methionine restriction on proliferation of human gastric cancer SGC7901 cells
JO  - Clin Chim Acta
Y1  - 2007
SP  - 206
EP  - 12
VL  - 377
IS  - 1-2
UR  - http://dx.doi.org/10.1016/j.cca.2006.09.027
ER  - 

TY  - JOUR
A1  - Khwaja FW
A1  - Duke-Cohan JS
A1  - Brat DJ
A1  - Van Meir EG
T1  - Attractin Is Elevated in the Cerebrospinal Fluid of Patients with Malignant Astrocytoma and Mediates Glioma Cell Migration
JO  - Clin Cancer Res
Y1  - 2006
SP  - 6331
EP  - 6336
VL  - 12
IS  - 21
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17085642&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Chevalier F
A1  - Rofidal V
A1  - Rossignol M
T1  - Visible and fluorescent staining of two-dimensional gels
JO  - Methods Mol Biol
Y1  - 2006
SP  - 145
EP  - 56
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093309&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Kelly RT
A1  - Page JS
A1  - Luo Q
A1  - Moore RJ
A1  - Orton DJ
A1  - Tang K
A1  - Smith RD
T1  - Chemically Etched Open Tubular and Monolithic Emitters for Nanoelectrospray Ionization Mass Spectrometry
JO  - Anal Chem
Y1  - 2006
SP  - 7796
EP  - 7801
VL  - 78
IS  - 22
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17105173&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Akashi T
A1  - Nishimura Y
A1  - Wakatabe R
A1  - Shiwa M
A1  - Yamori T
T1  - Proteomics-based identification of biomarkers for predicting sensitivity to a PI3-kinase inhibitor in cancer
JO  - Biochem Biophys Res Commun
Y1  - 2007
SP  - 514
EP  - 21
VL  - 352
IS  - 2
UR  - http://dx.doi.org/10.1016/j.bbrc.2006.11.052
ER  - 

TY  - JOUR
A1  - James A. Atwood III
A1  - Todd Minning
A1  - Fernanda Ludolf
A1  - Arthur Nuccio
A1  - Daniel B. Weatherly
A1  - Gerardo Alvarez-Manilla
A1  - Rick Tarleton
A1  - Ron Orlando
T1  - Glycoproteomics of Trypanosoma cruzi Trypomastigotes Using Subcellular Fractionation, Lectin Affinity, and Stable Isotope Labeling
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3376
EP  - 3384
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060364b
ER  - 

TY  - JOUR
A1  - Santoni V
T1  - Plant plasma membrane protein extraction and solubilization for proteomic analysis
JO  - Methods Mol Biol
Y1  - 2006
SP  - 93
EP  - 110
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093306&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Geng X
A1  - Wang C
T1  - Protein folding liquid chromatography and its recent developments
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.10.068
ER  - 

TY  - JOUR
A1  - Svensson AM
A1  - Whiteley GR
A1  - Callas PW
A1  - Bovill EG
T1  - SELDI-TOF plasma profiles distinguish individuals in a protein C-deficient family with thrombotic episodes occuring before age 40
JO  - Thromb Haemost
Y1  - 2006
SP  - 725
EP  - 30
VL  - 96
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17139365&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Leitsch D
A1  - Wilson IB
A1  - Paschinger K
A1  - Duchene M
T1  - Comparison of the proteome profiles of Entamoeba histolytica and its close but non-pathogenic relative Entamoeba dispar
JO  - Wien Klin Wochenschr
Y1  - 2006
SP  - 37
EP  - 41
VL  - 118
IS  - Supplement 3
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17131239&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Downes MR
A1  - Byrne JC
A1  - Pennington SR
A1  - Dunn MJ
A1  - Fitzpatrick JM
A1  - Watson RW
T1  - Urinary markers for prostate cancer
JO  - BJU Int
Y1  - 2007
SP  - 263
EP  - 8
VL  - 99
IS  - 2
UR  - http://dx.doi.org/10.1111/j.1464-410X.2006.06610.x
ER  - 

TY  - JOUR
A1  - Hassan Dihazi
T1  - Clinical proteomics: an insight into the urinary proteome
JO  - Expert Review of Proteomics
Y1  - 2006
SP  - 481
EP  - 482
VL  - 3
IS  - 5
UR  - http://dx.doi.org/10.1586/14789450.3.5.481
ER  - 

TY  - JOUR
A1  - Bezstarosti K
A1  - Das S
A1  - Lamers JM
A1  - Das DK
T1  - Differential proteomic profiling to study the mechanism of cardiac pharmacological preconditioning by resveratrol
JO  - J Cell Mol Med
Y1  - 2006
SP  - 896
EP  - 907
VL  - 10
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17125593&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Mann M
T1  - Functional and quantitative proteomics using SILAC
JO  - Nat Rev Mol Cell Biol
Y1  - 2006
SP  - 952
EP  - 8
VL  - 7
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17139335&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Stansfield SH
A1  - Allen EE
A1  - Dinnis DM
A1  - Racher AJ
A1  - Birch JR
A1  - James DC
T1  - Dynamic analysis of GS-NS0 cells producing a recombinant monoclonal antibody during fed-batch culture
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1002/bit.21263
ER  - 

TY  - JOUR
A1  - Azarkan M
A1  - Huet J
A1  - Baeyens-Volant D
A1  - Looze Y
A1  - Vandenbussche G
T1  - Affinity chromatography: A useful tool in proteomics studies
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.10.056
ER  - 

TY  - JOUR
A1  - Josip Blonder
A1  - Zhen Xiao
A1  - Timothy D Veenstra
T1  - Proteomic profiling of differentiating osteoblasts
JO  - Expert Review of Proteomics
Y1  - 2006
SP  - 483
EP  - 496
VL  - 3
IS  - 5
UR  - http://dx.doi.org/10.1586/14789450.3.5.483
ER  - 

TY  - JOUR
A1  - Vercauteren FG
A1  - Arckens L
A1  - Quirion R
T1  - Applications and current challenges of proteomic approaches, focusing on two-dimensional electrophoresis
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1007/s00726-006-0460-5
ER  - 

TY  - JOUR
A1  - Kehr J
A1  - Rep M
T1  - Protein extraction from xylem and Phloem sap
JO  - Methods Mol Biol
Y1  - 2006
SP  - 27
EP  - 36
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093299&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Grinyer J
A1  - Kautto L
A1  - Traini M
A1  - Willows RD
A1  - Te'o J
A1  - Bergquist P
A1  - Nevalainen H
T1  - Proteome mapping of the Trichoderma reesei 20S proteasome
JO  - Curr Genet
Y1  - 2007
SP  - 79
EP  - 88
VL  - 51
IS  - 2
UR  - http://dx.doi.org/10.1007/s00294-006-0108-8
ER  - 

TY  - JOUR
A1  - Xavier Hanoulle
A1  - Jozef Van Damme
A1  - An Staes
A1  - Lennart Martens
A1  - Marc Goethals
A1  - Joël Vandekerckhove
A1  - Kris Gevaert
T1  - A New Functional, Chemical Proteomics Technology To Identify Purine Nucleotide Binding Sites in Complex Proteomes
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3438
EP  - 3445
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060313e
ER  - 

TY  - JOUR
A1  - Zhao C
A1  - Huo R
A1  - Wang FQ
A1  - Lin M
A1  - Zhou ZM
A1  - Sha JH
T1  - Identification of several proteins involved in regulation of sperm motility by proteomic analysis
JO  - Fertil Steril
Y1  - 2007
SP  - 436
EP  - 8
VL  - 87
IS  - 2
UR  - http://dx.doi.org/10.1016/j.fertnstert.2006.06.057
ER  - 

TY  - JOUR
A1  - Huang JT
A1  - Leweke FM
A1  - Oxley D
A1  - Wang L
A1  - Harris N
A1  - Koethe D
A1  - Gerth CW
A1  - Nolden BM
A1  - Gross S
A1  - Schreiber D
A1  - Reed B
A1  - Bahn S
T1  - Disease Biomarkers in Cerebrospinal Fluid of Patients with First-Onset Psychosis
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1371/journal.pmed.0030428
ER  - 

TY  - JOUR
A1  - Lokeshwar VB
A1  - Selzer MG
T1  - Urinary bladder tumor markers
JO  - Urol Oncol
Y1  - 2006
SP  - 528
EP  - 537
VL  - 24
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17138134&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Deng H
T1  - Nitrite anions induce nitrosative deamination of peptides and proteins
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 3634
EP  - 3638
VL  - 20
IS  - 24
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17096454&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Lange E
A1  - Gropl C
A1  - Reinert K
A1  - Kohlbacher O
A1  - Hildebrandt A
T1  - High-accuracy peak picking of proteomics data using wavelet techniques
JO  - Pac Symp Biocomput
Y1  - 2006
SP  - 243
EP  - 54
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094243&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Krause K
A1  - Schierhorn A
A1  - Sinz A
A1  - Wissmann JD
A1  - Beck-Sickinger AG
A1  - Paschke R
A1  - Fuhrer D
T1  - Toward the application of proteomics to human thyroid tissue
JO  - Thyroid
Y1  - 2006
SP  - 1131
EP  - 43
VL  - 16
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17123340&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Alex Merrick B
T1  - Toxicoproteomics in liver injury and inflammation
JO  - Ann N Y Acad Sci
Y1  - 2006
SP  - 707
EP  - 17
VL  - 1076
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17119248&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Engkilde K
A1  - Jacobsen S
A1  - Sondergaard I
T1  - Multivariate data analysis of proteome data
JO  - Methods Mol Biol
Y1  - 2006
SP  - 195
EP  - 210
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093312&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Pal LR
A1  - Guda C
T1  - Tracing the origin of functional and conserved domains in the human proteome: implications for protein evolution at the modular level
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17090320&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Tannu N
A1  - Mash DC
A1  - Hemby SE
T1  - Cytosolic proteomic alterations in the nucleus accumbens of cocaine overdose victims
JO  - Mol Psychiatry
Y1  - 2007
SP  - 55
EP  - 73
VL  - 12
IS  - 1
UR  - http://dx.doi.org/10.1038/sj.mp.4001914
ER  - 

TY  - JOUR
A1  - Lotan Y
T1  - Discovery and validation of new protein biomarkers for urothelial cancer: A prospective analysis Theodorescu D, Wittke S, Ross MM, Walden M, Conaway M, Just I, Mischak H, Frierson HF, Department of Molecular Physiology, Mellon Prostate Cancer Institute, U
JO  - Urol Oncol
Y1  - 2006
SP  - 561
EP  - 2
VL  - 24
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17138149&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Hu R
A1  - Jin H
A1  - Zhou S
A1  - Yang P
A1  - Li X
T1  - Proteomic Analysis of Hypoxia-Induced Responses in the Syncytialization of Human Placental Cell Line BeWo
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1016/j.placenta.2006.07.005
ER  - 

TY  - JOUR
A1  - Wolski W
A1  - Farrow M
A1  - Emde A
A1  - Lehrach H
A1  - Lalowski M
A1  - Reinert K
T1  - Analytical model of peptide mass cluster centres with applications
JO  - 
Y1  - 
SP  - 
EP  - 
VL  - 
IS  - 
UR  - http://dx.doi.org/10.1186/1477-5956-4-18
ER  - 

TY  - JOUR
A1  - Mellgren RL
A1  - Zhang W
A1  - Miyake K
A1  - McNeil PL
T1  - Calpain is required for the rapid, calcium-dependent repair of wounded plasma membrane
JO  - J Biol Chem
Y1  - 2007
SP  - 2567
EP  - 75
VL  - 282
IS  - 4
UR  - http://dx.doi.org/10.1074/jbc.M604560200
ER  - 

TY  - JOUR
A1  - Thomas O. Metz
A1  - Jon M. Jacobs
A1  - Marina A. Gritsenko
A1  - Ghislaine Fontès
A1  - Wei-Jun Qian
A1  - David G. Camp II
A1  - Vincent Poitout
A1  - Richard D. Smith
T1  - Characterization of the Human Pancreatic Islet Proteome by Two-Dimensional LC/MS/MS
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3345
EP  - 3354
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060322n
ER  - 

TY  - JOUR
A1  - Hosaka M
A1  - Watanabe T
A1  - Yamauchi Y
A1  - Sakai Y
A1  - Suda M
A1  - Mizutani S
A1  - Takeuchi T
A1  - Isobe T
A1  - Izumi T
T1  - A Subset of p23 Localized on Secretory Granules in Pancreatic {beta}-cells
JO  - J Histochem Cytochem
Y1  - 2007
SP  - 235
EP  - 45
VL  - 55
IS  - 3
UR  - http://dx.doi.org/10.1369/jhc.6A7093.2006
ER  - 

TY  - JOUR
A1  - You SA
A1  - Wang QK
T1  - Proteomics with two-dimensional gel electrophoresis and mass spectrometry analysis in cardiovascular research
JO  - Methods Mol Med
Y1  - 2006
SP  - 15
EP  - 26
VL  - 129
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17085802&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Schwarz K
A1  - Fiedler T
A1  - Fischer RJ
A1  - Bahl H
T1  - A Standard Operating Procedure (SOP) for the preparation of intra- and extracellular proteins of Clostridium acetobutylicum for proteome analysis
JO  - J Microbiol Methods
Y1  - 2007
SP  - 396
EP  - 402
VL  - 68
IS  - 2
UR  - http://dx.doi.org/10.1016/j.mimet.2006.09.018
ER  - 

TY  - JOUR
A1  - Visith Thongboonkerd
A1  - Rattiyaporn Kanlaya
A1  - Supachok Sinchaikul
A1  - Paisal Parichatikanond
A1  - Shui-Tein Chen
A1  - Prida Malasit
T1  - Proteomic Identification of Altered Proteins in Skeletal Muscle During Chronic Potassium Depletion: Implications for Hypokalemic Myopathy
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3326
EP  - 3335
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060136h
ER  - 

TY  - JOUR
A1  - Petrik V
A1  - Loosemore A
A1  - Howe FA
A1  - Bell BA
A1  - Papadopoulos MC
T1  - OMICS and brain tumour biomarkers
JO  - Br J Neurosurg
Y1  - 2006
SP  - 275
EP  - 80
VL  - 20
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17129872&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Trong Khoa Pham
A1  - Poh Kuan Chong
A1  - Chee Sian Gan
A1  - Phillip C. Wright
T1  - Proteomic Analysis of Saccharomyces cerevisiae under High Gravity Fermentation Conditions
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3411
EP  - 3419
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060377p
ER  - 

TY  - JOUR
A1  - Fion L. Sung
A1  - Ronald T. K. Pang
A1  - Brigette B. Y. Ma
A1  - May M. L. Lee
A1  - Shuk Man Chow
A1  - Terence C. W. Poon
A1  - Anthony T. C. Chan
T1  - Pharmacoproteomics Study of Cetuximab in Nasopharyngeal Carcinoma
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3260
EP  - 3267
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr050452g
ER  - 

TY  - JOUR
A1  - Kerong Zhang
A1  - Carolyn McKinlay
A1  - Charles H. Hocart
A1  - Michael A. Djordjevic
T1  - The Medicago truncatula Small Protein Proteome and Peptidome
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3355
EP  - 3367
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060336t
ER  - 

TY  - JOUR
A1  - Wang H
A1  - Fu Y
A1  - Sun R
A1  - He S
A1  - Zeng R
A1  - Gao W
T1  - An SVM scorer for more sensitive and reliable peptide identification via tandem mass spectrometry
JO  - Pac Symp Biocomput
Y1  - 2006
SP  - 303
EP  - 14
VL  - 
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17094248&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Melle C
A1  - Camacho JA
A1  - Surber R
A1  - Betge S
A1  - Von Eggeling F
A1  - Zimmer T
T1  - Region-specific alterations of global protein expression in the remodelled rat myocardium
JO  - Int J Mol Med
Y1  - 2006
SP  - 1207
EP  - 15
VL  - 18
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17089028&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Schipper R
A1  - Loof A
A1  - de Groot J
A1  - Harthoorn L
A1  - Dransfield E
A1  - van Heerde W
T1  - SELDI-TOF-MS of saliva: Methodology and pre-treatment effects
JO  - J Chromatogr B Analyt Technol Biomed Life Sci
Y1  - 2007
SP  - 45
EP  - 53
VL  - 847
IS  - 1
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.10.005
ER  - 

TY  - JOUR
A1  - Harvie M
A1  - Jordan TW
A1  - La Flamme AC
T1  - Differential liver protein expression during schistosomiasis
JO  - Infect Immun
Y1  - 2007
SP  - 736
EP  - 44
VL  - 75
IS  - 2
UR  - http://dx.doi.org/10.1128/IAI.01048-06
ER  - 

TY  - JOUR
A1  - Paoletti AC
A1  - Parmely TJ
A1  - Tomomori-Sato C
A1  - Sato S
A1  - Zhu D
A1  - Conaway RC
A1  - Weliky Conaway J
A1  - Florens L
A1  - Washburn MP
T1  - Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors
JO  - Proc Natl Acad Sci U S A
Y1  - 2006
SP  - 18928
EP  - 33
VL  - 103
IS  - 50
UR  - http://dx.doi.org/10.1073/pnas.0606379103
ER  - 

TY  - JOUR
A1  - Dinnes DL
A1  - Marcal H
A1  - Mahler SM
A1  - Santerre JP
A1  - Labow RS
T1  - Material surfaces affect the protein expression patterns of human macrophages: A proteomics approach
JO  - J Biomed Mater Res A
Y1  - 2007
SP  - 895
EP  - 908
VL  - 80
IS  - 4
UR  - http://dx.doi.org/10.1002/jbm.a.30967
ER  - 

TY  - JOUR
A1  - Zhang Y
A1  - Zhang Y
A1  - Adachi J
A1  - Olsen JV
A1  - Shi R
A1  - de Souza G
A1  - Pasini E
A1  - Foster LJ
A1  - Macek B
A1  - Zougman A
A1  - Kumar C
A1  - Wisniewski JR
A1  - Jun W
A1  - Mann M
T1  - MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes
JO  - Nucleic Acids Res
Y1  - 2007
SP  - D771
EP  - 9
VL  - 35
IS  - Database issue
UR  - http://dx.doi.org/10.1093/nar/gkl784
ER  - 

TY  - JOUR
A1  - Kraljevic S
A1  - Sedic M
A1  - Scott M
A1  - Gehrig P
A1  - Schlapbach R
A1  - Pavelic K
T1  - Casting light on molecular events underlying anti-cancer drug treatment: What can be seen from the proteomics point of view?
JO  - Cancer Treat Rev
Y1  - 2006
SP  - 619
EP  - 29
VL  - 32
IS  - 8
UR  - http://dx.doi.org/10.1016/j.ctrv.2006.09.002
ER  - 

TY  - JOUR
A1  - Rohrbough JG
A1  - Breci L
A1  - Merchant N
A1  - Miller S
A1  - Haynes PA
T1  - Verification of single-Peptide protein identifications by the application of complementary database search algorithms
JO  - J Biomol Tech
Y1  - 2006
SP  - 327
EP  - 32
VL  - 17
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17122065&dopt=Abstract
ER  - 

TY  - JOUR
A1  - West-Norager M
A1  - Kelstrup CD
A1  - Schou C
A1  - Hogdall EV
A1  - Hogdall CK
A1  - Heegaard NH
T1  - Unravelling in vitro variables of major importance for the outcome of mass spectrometry-based serum proteomics
JO  - J Chromatogr B Analyt Technol Biomed Life Sci
Y1  - 2007
SP  - 30
EP  - 7
VL  - 847
IS  - 1
UR  - http://dx.doi.org/10.1016/j.jchromb.2006.09.048
ER  - 

TY  - JOUR
A1  - Francesca Forner
A1  - Edgar A. Arriaga
A1  - Matthias Mann
T1  - Mild Protease Treatment as a Small-Scale Biochemical Method for Mitochondria Purification and Proteomic Mapping of Cytoplasm-Exposed Mitochondrial Proteins
JO  - JOURNAL OF PROTEOME RESEARCH
Y1  - 2006
SP  - 3277
EP  - 3287
VL  - 5
IS  - 12
UR  - http://dx.doi.org/10.1021/pr060361z
ER  - 

TY  - JOUR
A1  - Ye NS
A1  - Chen J
A1  - Luo GA
A1  - Zhang RL
A1  - Zhao YF
A1  - Wang YM
T1  - Proteomic Profiling of Rat Bone Marrow Mesenchymal Stem Cells Induced by 5-Azacytidine
JO  - Stem Cells Dev
Y1  - 2006
SP  - 665
EP  - 676
VL  - 15
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17105402&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Scapin G
T1  - Protein kinase inhibition: different approaches to selective inhibitor design
JO  - Curr Drug Targets
Y1  - 2006
SP  - 1443
EP  - 54
VL  - 7
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17100584&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Chowdhury SM
A1  - Munske GR
A1  - Ronald RC
A1  - Bruce JE
T1  - Evaluation of Low Energy CID and ECD Fragmentation Behavior of Mono-Oxidized Thio-Ether Bonds in Peptides
JO  - J Am Soc Mass Spectrom
Y1  - 2007
SP  - 493
EP  - 501
VL  - 18
IS  - 3
UR  - http://dx.doi.org/10.1016/j.jasms.2006.10.019
ER  - 

TY  - JOUR
A1  - Frances R
A1  - Tumang JR
A1  - Rothstein TL
T1  - Extreme skewing of annexin II and S100A6 expression identified by proteomic analysis of peritoneal B-1 cells
JO  - Int Immunol
Y1  - 2007
SP  - 59
EP  - 65
VL  - 19
IS  - 1
UR  - http://dx.doi.org/10.1093/intimm/dxl122
ER  - 

TY  - JOUR
A1  - Ekman M
A1  - Tollback P
A1  - Klint J
A1  - Bergman B
T1  - Protein expression profiles in an endosymbiotic cyanobacterium revealed by a proteomic approach
JO  - Mol Plant Microbe Interact
Y1  - 2006
SP  - 1251
EP  - 61
VL  - 19
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17073307&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Fitchette AC
A1  - Dinh OT
A1  - Faye L
A1  - Bardor M
T1  - Plant proteomics and glycosylation
JO  - Methods Mol Biol
Y1  - 2006
SP  - 317
EP  - 42
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093320&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Xiao Z
A1  - Camalier CE
A1  - Nagashima K
A1  - Chan KC
A1  - Lucas DA
A1  - Cruz MJ
A1  - Gignac M
A1  - Lockett S
A1  - Issaq HJ
A1  - Veenstra TD
A1  - Conrads TP
A1  - Beck GR Jr
T1  - Analysis of the extracellular matrix vesicle proteome in mineralizing osteoblasts
JO  - J Cell Physiol
Y1  - 2007
SP  - 325
EP  - 35
VL  - 210
IS  - 2
UR  - http://dx.doi.org/10.1002/jcp.20826
ER  - 

TY  - JOUR
A1  - Crawford JT
A1  - Pereira L
A1  - Buckmaster J
A1  - Gravett MG
A1  - Tolosa JE
T1  - Amniocentesis results and novel proteomic analysis in a case of occult candidal chorioamnionitis
JO  - J Matern Fetal Neonatal Med
Y1  - 2006
SP  - 667
EP  - 70
VL  - 19
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17118743&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Tangwatcharin P
A1  - Chanthachum S
A1  - Khopaibool P
A1  - Griffiths MW
T1  - Morphological and physiological responses of Campylobacter jejuni to stress
JO  - J Food Prot
Y1  - 2006
SP  - 2747
EP  - 53
VL  - 69
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17133821&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Xie F
A1  - Baker MS
A1  - Goldys EM
T1  - Homogeneous Silver-Coated Nanoparticle Substrates for Enhanced Fluorescence Detection
JO  - J Phys Chem B Condens Matter Mater Surf Interfaces Biophys
Y1  - 2006
SP  - 23085
EP  - 23091
VL  - 110
IS  - 46
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17107148&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Rabilloud T
A1  - Luche S
A1  - Santoni V
A1  - Chevallet M
T1  - Detergents and Chaotropes for Protein Solubilization before Two-Dimensional Electrophoresis
JO  - Methods Mol Biol
Y1  - 2006
SP  - 111
EP  - 20
VL  - 355
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17093307&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Storms HF
A1  - van der Heijden R
A1  - Tjaden UR
A1  - van der Greef J
T1  - Considerations for proteolytic labeling-optimization of (18)O incorporation and prohibition of back-exchange
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 3491
EP  - 3497
VL  - 20
IS  - 23
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17072904&dopt=Abstract
ER  - 

TY  - JOUR
A1  - Liu N
A1  - Academia K
A1  - Rubio T
A1  - Wehr T
A1  - Yeck T
A1  - Jordan L
A1  - Hamby K
A1  - Paulus A
T1  - Actin deficiency induces cofilin phosphorylation: Proteome analysis of HeLa cells after beta-actin gene silencing
JO  - Cell Motil Cytoskeleton
Y1  - 2007
SP  - 110
EP  - 20
VL  - 64
IS  - 2
UR  - http://dx.doi.org/10.1002/cm.20169
ER  - 

TY  - JOUR
A1  - McComb ME
A1  - Perlman DH
A1  - Huang H
A1  - Costello CE
T1  - Evaluation of an on-target sample preparation system for matrix-assisted laser desorption/ionization time-of-flight mass spectrometry in conjunction with normal-flow peptide high-performance liquid chromatography for peptide mass fingerprint analyses
JO  - Rapid Commun Mass Spectrom
Y1  - 2006
SP  - 44
EP  - 58
VL  - 21
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17133622&dopt=Abstract
ER  -