%A Ping Ma
%T Bayesian Inference for Gene Expression and Proteomics
%0 Journal Article
%D 2007
%J Brief Bioinform
%P 376-377
%V 8
%N 5
%U http://dx.doi.org/10.1093/bib/bbm022

%A Miroslava Stastna
%A Ashley Behrens
%A Guillermo Noguera
%A Samantha Herretes
%A Peter McDonnell
%A Jennifer E. Van Eyk
%T Proteomics of the aqueous humor in healthy New Zealand rabbits
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4358-4375
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700300

%A An Chi
%A Lissette Valenzuela
%A Simon Beard
%A Aaron J. Mackey
%A Jeffrey Shabanowitz
%A Donald F. Hunt
%A Carlos A. Jerez
%T Periplasmic Proteins of the Extremophile Acidithiobacillus ferrooxidans: A High Throughput Proteomics Analysis
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2239-2251
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2239?etoc

%A Foster LJ
%A Chan QW
%T Lipid raft proteomics: more than just detergent-resistant membranes
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 35-47
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953390&dopt=Abstract

%A Urs Lewandrowski
%A Rene P. Zahedi
%A Jan Moebius
%A Ulrich Walter
%A Albert Sickmann
%T Enhanced N-Glycosylation Site Analysis of Sialoglycopeptides by Strong Cation Exchange Prefractionation Applied to Platelet Plasma Membranes
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1933-1941
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1933?etoc

%A Alison M. Winger
%A Nicolas L. Taylor
%A Joshua L. Heazlewood
%A David A. Day
%A A. Harvey Millar
%T Identification of intra- and intermolecular disulphide bonding in the plant mitochondrial proteome by diagonal gel electrophoresis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4158-4170
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700209

%A Li Y
%A Liu Y
%A Tang J
%A Lin H
%A Yao N
%A Shen X
%A Deng C
%A Yang P
%A Zhang X
%T Fe(3)O(4)@Al(2)O(3) magnetic core-shell microspheres for rapid and highly specific capture of phosphopeptides with mass spectrometry analysis
%0 Journal Article
%D 2007
%J J Chromatogr A
%P 57-71
%V 1172
%N 1
%U http://dx.doi.org/10.1016/j.chroma.2007.09.062

%A Julien Saint-Guirons
%A Elton Zeqiraj
%A Udo Schumacher
%A Pamela Greenwell
%A Miriam Dwek
%T Proteome analysis of metastatic colorectal cancer cells recognized by the lectin Helix pomatia agglutinin (HPA)
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4082-4089
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700434

%A Eszter Csanky
%A Petra Olivova
%A Eva Rajnavolgyi
%A William Hempel
%A Nadege Tardieu
%A Elesne Toth Katalin
%A Anne Jullien
%A Carole Malderez-Bloes
%A Mariana Kuras
%A Manuel X. Duval
%A Laszlo Nagy
%A Beata Scholtz
%A William Hancock
%A Barry Karger
%A András Guttman
%A Laszlo Taka
%T Monoclonal antibody proteomics: Discovery and prevalidation of chronic obstructive pulmonary disease biomarkers in a single step
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4401-4406
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700256

%A Shaojun Dai
%A Tai Wang
%A Xiufeng Yan
%A Sixue Chen
%T Proteomics of Pollen Development and Germination
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4556-4563
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070474y

%A Wannes D'Hertog
%A Lut Overbergh
%A Kasper Lage
%A Gabriela Bonfim Ferreira,Michael Maris
%A Conny Gysemans
%A Daisy Flamez
%A Alessandra Kupper Cardozo
%A Gert Van den Bergh
%A Liliane Schoofs
%A Lut Arckens
%A Yves Moreau
%A Daniel Aaen Hansen
%A Decio Laks Eizirik
%A Ettienne W
%T Proteomics Analysis of Cytokine-induced Dysfunction and Death in Insulin-producing INS-1E Cells: New Insights into the Pathways Involved
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2180-2199
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2180?etoc

%A Hekmat O
%A Florizone C
%A Kim YW
%A Eltis LD
%A Warren RA
%A Withers SG
%T Specificity Fingerprinting of Retaining beta-1,4-Glycanases in the Cellulomonas fimi Secretome Using Two Fluorescent Mechanism-Based Probes
%0 Journal Article
%D 2007
%J Chembiochem
%P 2125-2132
%V 8
%N 17
%U http://dx.doi.org/10.1002/cbic.200700481

%A Garcia Osuna E
%A Murphy RF
%T Automated, systematic determination of protein subcellular location using fluorescence microscopy
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 263-76
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953398&dopt=Abstract

%A Jellouli N
%A Ben Jouira H
%A Skouri H
%A Ghorbel A
%A Gourgouri A
%A Mliki A
%T Proteomic analysis of Tunisian grapevine cultivar Razegui under salt stress
%0 Journal Article
%D 2007
%J J Plant Physiol
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.jplph.2007.02.009
%8 Oct 15, 2007

%A Jean-Philippe Godin
%A Laurent-Bernard Fay
%A Gérard Hopfgartner
%T Liquid chromatography combined with mass spectrometry for 13C isotopic analysis in life science research
%0 Journal Article
%D 2007
%J Mass Spectrometry Reviews
%P 751-774
%V 26
%N 6
%U http://dx.doi.org/10.1002/mas.20149

%A Alves G
%A Ogurtsov AY
%A Yu YK
%T RAId DbS: Peptide Identification using Database Searches with Realistic Statistics
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17961253&dopt=Abstract

%A Rappel C
%A Schaumloffel D
%T The role of sulfur and sulfur isotope dilution analysis in quantitative protein analysis
%0 Journal Article
%D 2007
%J Anal Bioanal Chem
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s00216-007-1607-2
%8 Nov 6, 2007

%A Cheng Y
%A Zhang J
%A Li Y
%A Wang Y
%A Gong J
%T Proteome analysis of human gastric cardia adenocarcinoma by laser capture microdissection
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17927838&dopt=Abstract

%A Lukas M. Orre
%A Maria Pernemalm
%A Johan Lengqvist
%A Rolf Lewensohn
%A Janne Lehtio
%T Up-regulation, Modification, and Translocation of S100A6 Induced by Exposure to Ionizing Radiation Revealed by Proteomics Profiling
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2122-2131
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2122?etoc

%A Martin S
%A Brown WM
%A Faulon JL
%T Using Product Kernels to Predict Protein Interactions
%0 Journal Article
%D 2007
%J Adv Biochem Eng Biotechnol
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/10_2007_084
%8 Oct 6, 2007

%A Abdulilah A. Dawoud
%A Hetal A. Sarvaiya
%A Iulia M. Lazar
%T Microfluidic platform with mass spectrometry detection for the analysis of phosphoproteins
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4645-4660
%V 28
%N 24
%U http://dx.doi.org/10.1002/elps.200700355

%A Eleni Skordi
%A Ivan K. S. Yap
%A Sandrine P. Claus
%A François-Pierre J. Martin
%A Olivier Cloarec
%A Johan Lindberg
%A Ina Schuppe-Koistinen
%A Elaine Holmes
%A Jeremy K. Nicholson
%T Analysis of Time-Related Metabolic Fluctuations Induced by Ethionine in the Rat
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4572-4581
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070268q

%A Nilka Lineth Torres
%A Kyoungwon Cho
%A Junko Shibato
%A Misato Hirano
%A Akihiro Kubo
%A Yoshinori Masuo
%A Hitoshi Iwahashi
%A Nam-Soo Jwa
%A Ganesh Kumar Agrawal
%A Randeep Rakwal
%T Gel-based proteomics reveals potential novel protein markers of ozone stress in leaves of cultivated bean and maize species of Panama
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4369-4381
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700219

%A Garbett NC
%A Miller JJ
%A Jenson AB
%A Chaires JB
%T Calorimetry outside the box: a new window into the plasma proteome
%0 Journal Article
%D 2007
%J Biophys J
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17951300&dopt=Abstract
%8 Oct 19, 2007

%A Hiroyuki Kaji
%A Jun-ichi Kamiie
%A Hirotaka Kawakami
%A Kazuki Kido
%A YoshioYamauchi
%A Takashi Shinkawa
%A Masato Taoka
%A Nobuhiro Takahashi
%A Toshiaki Isobe
%T Proteomics Reveals N-Linked Glycoprotein Diversity in Caenorhabditis elegans and Suggests an Atypical Translocation Mechanism for Integral Membrane Proteins
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2100-2109
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2100?etoc

%A Kiehntopf M
%A Siegmund R
%A Deufel T
%T Use of SELDI-TOF mass spectrometry for identification of new biomarkers: potential and limitations
%0 Journal Article
%D 2007
%J Clin Chem Lab Med
%P 1435-49
%V 45
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17970700&dopt=Abstract

%A Andreas Guttman
%A Laszio Takacs
%T Biomarker Discovery and Related Topics
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://dx.doi.org/10.1002/elps.200790086

%A Zhang Y
%A Ma YF
%A Qi SW
%A Meng B
%A Chaudhry MT
%A Liu SQ
%A Liu SJ
%T Responses to arsenate stress by Comamonas sp. strain CNB-1 at genetic and proteomic levels
%0 Journal Article
%D 2007
%J Microbiology
%P 3713-3721
%V 153
%N Pt 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17975079&dopt=Abstract

%A Sanchez A
%A Ramos Y
%A Solano Y
%A Gonzalez LJ
%A Betancourt L
%A Gil J
%A Padron G
%A Besada V
%T Letter: Specific isotope labeling for the identification of free N-terminal peptide of proteins separated by polyacrylamide gel electrophoresis
%0 Journal Article
%D 2007
%J Eur J Mass Spectrom (Chichester, Eng)
%P 307-9
%V 13
%N 4
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17942980&dopt=Abstract

%A Lunbiao Cui
%A Yubang Wang
%A Yuan Shi
%A Zhengdong Zhang
%A Yankai Xia
%A Hong Sun
%A Shouling Wang
%A Jianfeng Chen
%A Wei Zhang
%A Qiang Lu
%A Ling Song
%A Qingyi Wei
%A Ruiwen Zhang
%A Xinru Wang
%T Overexpression of annexin a1 induced by terephthalic acid calculi in rat bladder cancer
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4192-4202
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700582

%A Wu TF
%A Hsu CY
%A Huang HS
%A Chou SP
%A Wu H
%T Proteomic Analysis of Pycnogenol Effects in RAW 264.7 Macrophage Reveals Induction of Cathepsin D Expression and Enhancement of Phagocytosis
%0 Journal Article
%D 2007
%J J Agric Food Chem
%P 9784-9791
%V 55
%N 24
%U http://dx.doi.org/10.1021/jf070453o

%A Emmanuelle Com
%A Chann Lagadec
%A Adeline Page
%A Ikram El Yazidi-Belkoura,Christian Slomianny
%A Ambre Spencer
%A Djilali Hammache
%A Brian B. Rudkin
%A Hubert Hondermarck
%T Nerve Growth Factor Receptor TrkA Signaling in Breast Cancer Cells Involves Ku70 to Prevent Apoptosis
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1842-1854
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1842?etoc

%A Cristina Di Poto
%A Paolo Iadarola
%A Roberta Salvini
%A Ileana Passadore
%A Cristina Cereda
%A Mauro Ceroni
%A Anna Maria Bardoni
%T Optimizing separation efficiency of 2-DE procedures for visualization of different superoxide dismutase forms in a cellular model of amyotrophic lateral sclerosis
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4340-4347
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700162

%A Kim SG
%A Kim ST
%A Kang SY
%A Wang Y
%A Kim W
%A Kang KY
%T Proteomic analysis of reactive oxygen species (ROS)-related proteins in rice roots
%0 Journal Article
%D 2007
%J Plant Cell Rep
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s00299-007-0441-5
%8 Oct 12, 2007

%A Iyer LM
%A Anantharaman V
%A Wolf MY
%A Aravind L
%T Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes
%0 Journal Article
%D 2007
%J Int J Parasitol
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.ijpara.2007.07.018
%8 Sep 15, 2007

%A Xumin Zhang
%A Juanying Ye
%A Ole N. Jensen
%A Peter Roepstorff
%T Highly Efficient Phosphopeptide Enrichment by Calcium Phosphate Precipitation Combined with Subsequent IMAC Enrichment
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2032-2042
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/2032?etoc

%A Chenwei Liu
%A Nancy Shea
%A Sally Rucker
%A Linda Harvey
%A Paul Russo
%A Richard Saul
%A Mary F. Lopez
%A Alvydas Mikulskis
%A Scott Kuzdzal
%A Eva Golenko
%A David Fishman
%A Eric Vonderheid
%A Susan Booher
%A Edward W. Cowen
%A Sam T. Hwang
%A Gordon R. Whiteley
%T Proteomic patterns for classification of ovarian cancer and CTCL serum samples utilizing peak pairs indicative of post-translational modifications
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4045-4052
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200601044

%A Scott Bidlingmaier and Bin Liu
%T Interrogating Yeast Surface-displayed Human Proteome to Identify Small Molecule-binding Proteins
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2012-2020
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/2012?etoc

%A Koenig S
%A Mehlich AM
%A Ackermann D
%A Hamid ME
%A Saeed NS
%A Mukhtar M
%A Hassan ME
%T Homologous housekeeping proteins in Nocardia - the NoDaMS proteomic database
%0 Journal Article
%D 2008
%J Front Biosci
%P 842-55
%V 13
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17981593&dopt=Abstract

%A Christian Pasquali
%A Dominique Bertschy-Meier
%A Christian Chabert
%A Marie-Laure Curchod
%A Christian Arod
%A Randy Booth
%A Karl Mechtler
%A Francis Vilbois
%A Ioannis Xenarios
%A Colin G. Ferguson
%A Glenn D. Prestwich
%A Montserrat Camps
%A Christian Rommel
%T A Chemical Proteomics Approach to Phosphatidylinositol 3-Kinase Signaling in Macrophages
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1829-1841
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1829?etoc

%A Gharbi S
%A Garzon B
%A Gayarre J
%A Timms J
%A Perez-Sala D
%T Study of protein targets for covalent modification by the antitumoral and anti-inflammatory prostaglandin PGA(1): focus on vimentin
%0 Journal Article
%D 2007
%J J Mass Spectrom
%P 1474-1484
%V 42
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17960581&dopt=Abstract

%A Afjehi-Sadat L
%A Lubec G
%T Identification of enzymes and activity from two-dimensional gel electrophoresis
%0 Journal Article
%D 2007
%J Nat Protoc
%P 2318-24
%V 2
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17947972&dopt=Abstract

%A Morten Krogh
%A Yingchun Liu
%A Sofia Waldemarson
%A Barbara Valastro
%A Peter James
%T Analysis of DIGE data using a linear mixed model allowing for protein-specific dye effects
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4235-4244
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700339

%A Mikkel Nissum
%A Sabine Kuhfuss
%A Monika Hauptmann
%A Christian Obermaier
%A Ute Sukop
%A Robert Wildgruber
%A Gerhard Weber
%A Christoph Eckerskorn
%A Johan Malmström
%T Two-dimensional separation of human plasma proteins using iterative free-flow electrophoresis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4218-4227
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700166

%A Shuang Lin
%A Zhenxin Lin
%A Guoping Yao
%A Chunhui Deng
%A Pengyuan Yang
%A Xiangmin Zhang
%T Development of microwave-assisted protein digestion based on trypsin-immobilized magnetic microspheres for highly efficient proteolysis followed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis
%0 Journal Article
%D 2007
%J Rapid Communications in Mass Spectrometry
%P 3910-3918
%V 21
%N 23
%U http://dx.doi.org/10.1002/rcm.3283

%A de Groot MJ
%A Daran-Lapujade P
%A van Breukelen B
%A Knijnenburg TA
%A de Hulster EA
%A Reinders MJ
%A Pronk JT
%A Heck AJ
%A Slijper M
%T Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes
%0 Journal Article
%D 2007
%J Microbiology
%P 3864-3878
%V 153
%N Pt 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17975095&dopt=Abstract

%A Olver C
%A Vidal M
%T Proteomic analysis of secreted exosomes
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 99-131
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953393&dopt=Abstract

%A Zhu J
%A Alvarez S
%A Marsh E
%A Lenoble ME
%A Cho IJ
%A Sivaguru M
%A Chen S
%A Nguyen HT
%A Wu Y
%A Schachtman DP
%A Sharp RE
%T Cell Wall Proteome in the Maize Primary Root Elongation Zone. II. Region-Specific Changes in Water Soluble and Lightly Ionically-Bound Proteins under Water Deficit
%0 Journal Article
%D 2007
%J Plant Physiol
%P 1533-48
%V 145
%N 4
%U http://dx.doi.org/10.1104/pp.107.107250

%A Yamaguchi Y
%A Miyagi Y
%A Baba H
%T Two-dimensional electrophoresis with cationic detergents, a powerful tool for the proteomic analysis of myelin proteins. Part 1: Technical aspects of electrophoresis
%0 Journal Article
%D 2007
%J J Neurosci Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1002/jnr.21547
%8 Oct 25, 2007

%A Matt P
%A Fu Z
%A Carrel T
%A Huso DL
%A Dirnhofer S
%A Lefkovits I
%A Zerkowski HR
%A Van Eyk JE
%T Proteomic alterations in heat shock protein 27 and identification of phosphoproteins in ascending aortic aneurysm associated with bicuspid and tricuspid aortic valve
%0 Journal Article
%D 2007
%J J Mol Cell Cardiol
%P 792-801
%V 43
%N 6
%U http://dx.doi.org/10.1016/j.yjmcc.2007.08.011

%A Negroni L
%A Samson M
%A Guigonis JM
%A Rossi B
%A Pierrefite-Carle V
%A Baudoin C
%T Treatment of colon cancer cells using the cytosine deaminase/5-fluorocytosine suicide system induces apoptosis, modulation of the proteome, and Hsp90{beta} phosphorylation
%0 Journal Article
%D 2007
%J Mol Cancer Ther
%P 2747-56
%V 6
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17938268&dopt=Abstract

%A Rosenfeld RG
%T Pharmacogenomics and pharmacoproteomics in the evaluation and management of short stature
%0 Journal Article
%D 2007
%J Eur J Endocrinol
%P S27-31
%V 157
%N Suppl 1
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17785693&dopt=Abstract

%A He QY
%A He QZ
%A Deng XC
%A Yao L
%A Meng E
%A Liu ZH
%A Liang SP
%T ATDB: a uni-database platform for animal toxins
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1093/nar/gkm832
%8 Oct 11, 2007

%A Sébastien Voisin
%A David C. Watson
%A Luc Tessier
%A Wen Ding
%A Simon Foote
%A Smita Bhatia
%A John F. Kelly
%A N. Martin Young
%T The cytoplasmic phosphoproteome of the Gram-negative bacterium Campylobacter jejuni: Evidence for modification by unidentified protein kinases
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4338-4348
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700483

%A Cristina Di Poto
%A Paolo Iadarola
%A Anna Maria Bardoni
%A Ileana Passadore
%A Sofia Giorgetti
%A Cristina Cereda
%A Maria Teresa Carrě
%A Mauro Ceroni
%A Roberta Salvini
%T 2-DE and MALDI-TOF-MS for a comparative analysis of proteins expressed in different cellular models of amyotrophic lateral sclerosis
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4320-4329
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700455

%A Lucien F. Harthoorn
%A Raymond G. Schipper
%A Arnoud Loof
%A Pieter F. G. Vereijken
%A Waander L. Van Heerde
%A Eric Dransfield
%T Salivary biomarkers associated with perceived satiety and body mass in humans
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1637-1650
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700448

%A Bruce S. Seal
%A Kelli L. Hiett
%A Robin L. Kuntz
%A Rebekah Woolsey
%A Kathleen M. Schegg
%A Mary Ard
%A Alain Stintzi
%T Proteomic Analyses of a Robust versus a Poor Chicken Gastrointestinal Colonizing Isolate of Campylobacter jejuni
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4582-4591
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070356a

%A Cline MS
%A Smoot M
%A Cerami E
%A Kuchinsky A
%A Landys N
%A Workman C
%A Christmas R
%A Avila-Campilo I
%A Creech M
%A Gross B
%A Hanspers K
%A Isserlin R
%A Kelley R
%A Killcoyne S
%A Lotia S
%A Maere S
%A Morris J
%A Ono K
%A Pavlovic V
%A Pico AR
%A Vailaya A
%A Wang PL
%A Adler A
%A Conklin BR,
%T Integration of biological networks and gene expression data using Cytoscape
%0 Journal Article
%D 2007
%J Nat Protoc
%P 2366-82
%V 2
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17947979&dopt=Abstract

%A Peter Horvatovich
%A Natalia I. Govorukhina
%A Theo H. Reijmers
%A Ate G. J. van der Zee
%A Frank Suits
%A Rainer Bischoff
%T Chip-LC-MS for label-free profiling of human serum
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4493-4505
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200600719

%A Hu S
%A Wang J
%A Meijer J
%A Ieong S
%A Xie Y
%A Yu T
%A Zhou H
%A Henry S
%A Vissink A
%A Pijpe J
%A Kallenberg C
%A Elashoff D
%A Loo JA
%A Wong DT
%T Salivary proteomic and genomic biomarkers for primary Sjogren's syndrome
%0 Journal Article
%D 2007
%J Arthritis Rheum
%P 3588-3600
%V 56
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17968930&dopt=Abstract

%A Michael T. Davis
%A Paul Auger
%A Chris Spahr
%A Scott D. Patterson
%T Cancer biomarker discovery via low molecular weight serum proteome profiling - Where is the tumor?
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1545-1558
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700141

%A Sun-Hee Heo
%A Seung-Jin Lee
%A Hyun-Mo Ryoo
%A Jae-Yong Park
%A Je-Yoel Cho
%T Identification of putative serum glycoprotein biomarkers for human lung adenocarcinoma by multilectin affinity chromatography and LC-MS/MS
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4292-4302
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700433

%A Taeoh Kim
%A Sang Jin Kim
%A Kyunggon Kim
%A Un-Beom Kang
%A Cheolju Lee
%A Kyong Soo Park
%A Hyeong Gon Yu
%A Youngsoo Kim
%T Profiling of vitreous proteomes from proliferative diabetic retinopathy and nondiabetic patients
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4203-4215
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700745

%A Esther Llop
%A Ricardo Gutiérrez Gallego
%A Viviana Belalcazar
%A Gerrit J. Gerwig
%A Johannis P. Kamerling
%A Jordi Segura
%A José A. Pascual
%T Evaluation of protein N-glycosylation in 2-DE: Erythropoietin as a study case
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4278-4291
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700572

%A Gendler K
%A Paulsen T
%A Napoli C
%T ChromDB: The Chromatin Database
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1093/nar/gkm768
%8 Oct 16, 2007

%A Desrosiers RR
%A Beaulieu E
%A Buchanan M
%A Beliveau R
%T Proteomic analysis of human plasma proteins by two-dimensional gel electrophoresis and by antibody arrays following depletion of high-abundance proteins
%0 Journal Article
%D 2007
%J Cell Biochem Biophys
%P 182-95
%V 49
%N 3
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17952643&dopt=Abstract

%A van den Berg BH
%A Harris T
%A McCarthy FM
%A Lamont SJ
%A Burgess SC
%T Non-electrophoretic differential detergent fractionation proteomics using frozen whole organs
%0 Journal Article
%D 2007
%J Rapid Commun Mass Spectrom
%P 3905-3909
%V 21
%N 23
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17990261&dopt=Abstract

%A Heazlewood JL
%A Durek P
%A Hummel J
%A Selbig J
%A Weckwerth W
%A Walther D
%A Schulze WX
%T PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1093/nar/gkm812
%8 Nov 4, 2007

%A Ky CL
%A de Lorgeril J
%A Hirtz C
%A Sommerer N
%A Rossignol M
%A Bonhomme F
%T The effect of environmental salinity on the proteome of the sea bass (Dicentrarchus labrax L.)
%0 Journal Article
%D 2007
%J Anim Genet
%P 601-8
%V 38
%N 6
%U http://dx.doi.org/10.1111/j.1365-2052.2007.01652.x

%A Angelo Zinellu
%A Salvatore Sotgia
%A Bastianina Scanu
%A Marilena Formato
%A Luca Deiana
%A Ciriaco Carru
%T Assessment of protein-incorporated arginine methylation in biological specimens by CZE UV-detection
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4452-4458
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700153

%A Virginie Brun
%A Alain Dupuis
%A Annie Adrait
%A Marlene Marcellin
%A Damien Thomas
%A Magali Court
%A Francois Vandenesch
%A Jerome Garin
%T Isotope-labeled Protein Standards: Toward Absolute Quantitative Proteomics
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2139-2149
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2139?etoc

%A Hu S
%A Wong DT
%T Oral cancer proteomics
%0 Journal Article
%D 2007
%J Curr Opin Mol Ther
%P 467-76
%V 9
%N 5
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17932810&dopt=Abstract

%A Meyrick BO
%A Friedman DB
%A Billheimer DD
%A Cogan JD
%A Prince MA
%A Phillips JA
%A Loyd JE
%T Proteomics of Transformed Lymphocytes from a Family with Familial Pulmonary Arterial Hypertension
%0 Journal Article
%D 2007
%J Am J Respir Crit Care Med
%P -
%V 
%N 
%U http://dx.doi.org/10.1164/rccm.200703-499OC
%8 Oct 11, 2007

%A Liang Qiao
%A Christophe Roussel
%A Jingjing Wan
%A Pengyuan Yang
%A Hubert H. Girault
%A Baohong Liu
%T Specific On-Plate Enrichment of Phosphorylated Peptides for Direct MALDI-TOF MS Analysis
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4763-4769
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr0705284

%A Guillaume L. Erny
%A Maria Luisa Marina
%A Alejandro Cifuentes
%T CE-MS of zein proteins from conventional and transgenic maize
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4192-4201
%V 28
%N 22
%U http://dx.doi.org/10.1002/elps.200700323

%A Jiyang Zhang
%A Jianqi Li
%A Hongwei Xie
%A Yunping Zhu
%A Fuchu He
%T A new strategy to filter out false positive identifications of peptides in SEQUEST database search results
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4036-4044
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200600929

%A Saleem A. Bokhari
%A Xiang-Yuan Wan
%A Yi-Wei Yang
%A Lu Zhou
%A Wan-Li Tang
%A Jin-Yuan Liu
%T Proteomic Response of Rice Seedling Leaves to Elevated CO2 Levels
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4624-4633
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070524z

%A Fa-Yun Che
%A Xin Zhang
%A Iryna Berezniuk
%A Myrasol Callaway
%A Jihyeon Lim
%A Lloyd D. Fricker
%T Optimization of Neuropeptide Extraction from the Mouse Hypothalamus
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4667-4676
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr060690r

%A Martini J
%A Hellmich W
%A Greif D
%A Becker A
%A Merkle T
%A Ros R
%A Ros A
%A Toensing K
%A Anselmetti D
%T Systems nanobiology: from quantitative single molecule biophysics to microfluidic-based single cell analysis
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 301-21
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953400&dopt=Abstract

%A Franz F. Roos
%A Riko Jacob
%A Jonas Grossmann
%A Bernd Fischer
%A Joachim M. Buhmann
%A Wilhelm Gruissem
%A Sacha Baginsky
%A Peter Widmayer
%T PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra
%0 Journal Article
%D 2007
%J Bioinformatics
%P 3016-3023
%V 23
%N 22
%U http://bioinformatics.oxfordjournals.org/cgi/content/abstract/23/22/3016?etoc

%A Lewandrowski U
%A Zahedi RP
%A Moebius J
%A Sickmann A
%T Functional proteome analysis of human platelets
%0 Journal Article
%D 2007
%J Hamostaseologie
%P 241-245
%V 27
%N 4
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17938761&dopt=Abstract

%A Anton Ressine
%A Irina Corin
%A Kerstin Järĺs
%A Ginevra Guanti
%A Cristiano Simone
%A György Marko-Varga
%A Thomas Laurell
%T Porous silicon surfaces - A candidate substrate for reverse protein arrays in cancer biomarker detection
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4407-4415
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700379

%A Ryu MJ
%A Lee C
%A Kim J
%A Shin HS
%A Yu MH
%T Proteomic analysis of stargazer mutant mouse neuronal proteins involved in absence seizure
%0 Journal Article
%D 2007
%J J Neurochem
%P -
%V 
%N 
%U http://dx.doi.org/10.1111/j.1471-4159.2007.05100.x
%8 Oct 31, 2007

%A Graner MW
%A Cumming RI
%A Bigner DD
%T The heat shock response and chaperones/heat shock proteins in brain tumors: surface expression, release, and possible immune consequences
%0 Journal Article
%D 2007
%J J Neurosci
%P 11214-27
%V 27
%N 42
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17942716&dopt=Abstract

%A Christina Herzberg
%A Lope Andrés Flórez Weidinger
%A Bastian Dörrbecker
%A Sebastian Hübner
%A Jörg Stülke
%A Fabian M. Commichau
%T SPINE: A method for the rapid detection and analysis of protein-protein interactions in vivo
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4032-4035
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700491

%A Su C
%A Peregrin-Alvarez JM
%A Butland G
%A Phanse S
%A Fong V
%A Emili A
%A Parkinson J
%T Bacteriome.org an integrated protein interaction database for E. coli
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1093/nar/gkm807
%8 Oct 16, 2007

%A Son D
%A Kojima I
%A Inagi R
%A Matsumoto M
%A Fujita T
%A Nangaku M
%T Chronic hypoxia aggravates renal injury via suppression of Cu/Zn-SOD - a proteomic analysis
%0 Journal Article
%D 2007
%J Am J Physiol Renal Physiol
%P -
%V 
%N 
%U http://dx.doi.org/10.1152/ajprenal.00113.2007
%8 Oct 24, 2007

%A Zhang H
%A Chan DW
%T Cancer Biomarker Discovery in Plasma Using a Tissue-targeted Proteomic Approach
%0 Journal Article
%D 2007
%J Cancer Epidemiol Biomarkers Prev
%P 1915-7
%V 16
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17932335&dopt=Abstract

%A Shao W
%A Yeretssian G
%A Doiron K
%A Hussain SN
%A Saleh M
%T The caspase-1 digestome identifies the glycolysis pathway as a target during infection and septic shock
%0 Journal Article
%D 2007
%J J Biol Chem
%P 36321-9
%V 282
%N 50
%U http://dx.doi.org/10.1074/jbc.M708182200

%A Fu L
%A Qin YR
%A Xie D
%A Chow HY
%A Ngai SM
%A Kwong DL
%A Li Y
%A Guan XY
%T Identification of alpha-actinin 4 and 67 kDa laminin receptor as stage-specific markers in esophageal cancer via proteomic approaches
%0 Journal Article
%D 2007
%J Cancer
%P 2672-81
%V 110
%N 12
%U http://dx.doi.org/10.1002/cncr.23110

%A Robert Ahrends
%A Stefan Pieper
%A Andreas Kuhn
%A Hardy Weisshoff
%A Meike Hamester
%A Torsten Lindemann
%A Christian Scheler
%A Karola Lehmann
%A Kerstin Taubner
%A Michael W. Linscheid
%T A Metal-coded Affinity Tag Approach to Quantitative Proteomics
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1907-1916
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1907?etoc

%A Anne Marmagne
%A Myriam Ferro
%A Thierry Meinnel
%A Christophe Bruley
%A Lauriane Kuhn
%A Jerome Garin
%A Helene Barbier-Brygoo
%A Genevieve Ephritikhine
%T A High Content in Lipid-modified Peripheral Proteins and Integral Receptor Kinases Features in the Arabidopsis Plasma Membrane Proteome
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1980-1996
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1980?etoc

%A Smith DG
%A Gawryluk RM
%A Spencer DF
%A Pearlman RE
%A Siu KW
%A Gray MW
%T Exploring the Mitochondrial Proteome of the Ciliate Protozoon Tetrahymena thermophila: Direct Analysis by Tandem Mass Spectrometry
%0 Journal Article
%D 2007
%J J Mol Biol
%P 837-63
%V 374
%N 3
%U http://dx.doi.org/10.1016/j.jmb.2007.09.051

%A Fuchs D
%A Vafeiadou K
%A Hall WL
%A Daniel H
%A Williams CM
%A Schroot JH
%A Wenzel U
%T Proteomic biomarkers of peripheral blood mononuclear cells obtained from postmenopausal women undergoing an intervention with soy isoflavones
%0 Journal Article
%D 2007
%J Am J Clin Nutr
%P 1369-75
%V 86
%N 5
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17991648&dopt=Abstract

%A Yoko Ishino
%A Hitomi Okada
%A Masahiko Ikeuchi
%A Hisaaki Taniguchi
%T Mass spectrometry-based prokaryote gene annotation
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4053-4065
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700080

%A Karen Le Moguen
%A Hubert Lincet
%A Paulo Marcelo
%A Edwige Lemoisson
%A Natacha Heutte
%A Marilyne Duval
%A Laurent Poulain
%A Joëlle Vinh
%A Pascal Gauduchon
%A Bruno Baudin
%T A proteomic kinetic analysis of IGROV1 ovarian carcinoma cell line response to cisplatin treatment
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4090-4101
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700231

%A Richard W. Smith
%A Jiaxi Wang
%A Carol P. Bucking
%A Carmel E. Mothersill
%A Colin B. Seymour
%T Evidence for a protective response by the gill proteome of rainbow trout exposed to X-ray induced bystander signals
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4171-4180
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700573

%A Kerrien S
%A Orchard S
%A Montecchi-Palazzi L
%A Aranda B
%A Quinn AF
%A Vinod N
%A Bader GD
%A Xenarios I
%A Wojcik J
%A Sherman D
%A Tyers M
%A Salama JJ
%A Moore S
%A Ceol A
%A Chatr-Aryamontri A
%A Oesterheld M
%A Stumpflen V
%A Salwinski L
%A Nerothin J
%A Cerami E
%A Cusick ME
%A Vidal M
%A G
%T Broadening the Horizon - Level 2.5 of the HUPO-PSI Format for Molecular Interactions
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17925023&dopt=Abstract

%A Ichibangase T
%A Saimaru H
%A Takamura N
%A Kuwahara T
%A Koyama A
%A Iwatsubo T
%A Imai K
%T Proteomics of Caenorhabditis elegans over-expressing human alpha-synuclein analyzed by fluorogenic derivatization-liquid chromatography/tandem mass spectrometry: identification of actin and several ribosomal proteins as negative markers at early Parkinson
%0 Journal Article
%D 2007
%J Biomed Chromatogr
%P -
%V 
%N 
%U http://dx.doi.org/10.1002/bmc.931
%8 Oct 15, 2007

%A Yunhao Chen
%A Lee-Yee Choong
%A Qingsong Lin
%A Robin Philp
%A Chee-Hong Wong
%A Boon-Keong Ang
%A Yee-Ling Tan
%A Marie-Chiew-Shia Loh
%A Choy-Leong Hew
%A Nilesh Shah
%A Brian J. Druker
%A Poh-Kuan Chong
%A Yoon-Pin Lim
%T Differential Expression of Novel Tyrosine Kinase Substrates during Breast Cancer Development
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2072-2087
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2072?etoc

%A Ju Ah Jeong
%A Kyung-Min Ko
%A Hyung Soon Park
%A Jinsook Lee
%A Cholsoon Jang
%A Choon-Ju Jeon
%A Gou Young Koh
%A Hoeon Kim
%T Membrane proteomic analysis of human mesenchymal stromal cells during adipogenesis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4181-4191
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700502

%A Alessio Maiolica
%A Davide Cittaro
%A Dario Borsotti
%A Lau Sennels
%A ClaudioCiferri
%A Cataldo Tarricone
%A Andrea Musacchio
%A Juri Rappsilber
%T Structural Analysis of Multiprotein Complexes by Cross-linking, Mass Spectrometry, and Database Searching
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2200-2211
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2200?etoc

%A Zilberstein G
%A Korol L
%A Righetti PG
%A Bukshpan S
%T SDS-PAGE Focusing: Preparative Aspects
%0 Journal Article
%D 2007
%J Anal Chem
%P 8624-30
%V 79
%N 22
%U http://dx.doi.org/10.1021/ac701598y

%A Nadia Abed
%A Marc Bickle
%A Bernard Mari
%A Matthieu Schapira
%A Raquel Sanjuan-Espana
%A Karine Robbe Sermesant
%A Olivier Moncorge
%A Sandrine Mouradian-Garcia
%A Pascal Barbry
%A Brian B. Rudkin
%A Marie-Odile Fauvarque
%A Isabelle Michaud-Soret
%A Pierre Colas
%T A Comparative Analysis of Perturbations Caused by a Gene Knock-out, a Dominant Negative Allele, and a Set of Peptide Aptamers
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2110-2121
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2110?etoc

%A Huhne R
%A Koch FT
%A Suhnel J
%T A comparative view at comprehensive information resources on three-dimensional structures of biological macro-molecules
%0 Journal Article
%D 2007
%J Brief Funct Genomic Proteomic
%P 220-39
%V 6
%N 3
%U http://dx.doi.org/10.1093/bfgp/elm020

%A Qingchun Zhang and Yinsheng Wang
%T Homeodomain-Interacting Protein Kinase-2 (HIPK2) Phosphorylates HMGA1a at Ser-35, Thr-52, and Thr-77 and Modulates Its DNA Binding Affinity
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4711-4719
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr700571d

%A Vathany Kulasingam and Eleftherios P. Diamandis
%T Proteomics Analysis of Conditioned Media from Three Breast Cancer Cell Lines: A Mine for Biomarkers and Therapeutic Targets
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1997-2011
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1997?etoc

%A Hasmik Keshishian
%A Terri Addona
%A Michael Burgess
%A Eric Kuhn
%A Steven A. Carr
%T Quantitative, Multiplexed Assays for Low Abundance Proteins in Plasma by Targeted Mass Spectrometry and Stable Isotope Dilution
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2212-2229
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2212?etoc

%A Wei-Qiang Chen
%A Andrus Viidik
%A Monika Skalicky
%A Harald Höger
%A Gert Lubec
%T Hippocampal signaling cascades are modulated in voluntary and treadmill exercise rats
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4392-4400
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700336

%A Jiang Wu
%A Wei Liu
%A Eric Sousa
%A Yongchang Qiu
%A Debra D. Pittman
%A Vasu Maganti
%A Jeffrey Feldman
%A Davinder Gill
%A Zhijian Lu
%A Andrew J. Dorner
%A Robert Schaub
%A Xiang-Yang Tan
%T Proteomic Identification of Endothelial Proteins Isolated in Situ from Atherosclerotic Aorta via Systemic Perfusion
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4728-4736
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070537c

%A Nicolas Abello
%A Huib A. M. Kerstjens
%A Dirkje S. Postma
%A Rainer Bischoff
%T Selective Acylation of Primary Amines in Peptides and Proteins
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4770-4776
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070154e

%A Zong Y
%A Zhang S
%A Chen HT
%A Zong Y
%A Shi Y
%T Forward-phase and reverse-phase protein microarray
%0 Journal Article
%D 2007
%J Methods Mol Biol
%P 363-74
%V 381
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17984529&dopt=Abstract

%A Rees-Unwin KS
%A Craven RA
%A Davenport E
%A Hanrahan S
%A Totty NF
%A Dring AM
%A Banks RE
%A J Morgan G
%A Davies FE
%T Proteomic evaluation of pathways associated with dexamethasone-mediated apoptosis and resistance in multiple myeloma
%0 Journal Article
%D 2007
%J Br J Haematol
%P 559-67
%V 139
%N 4
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17979943&dopt=Abstract

%A Yang X
%A Thannhauser TW
%A Burrows M
%A Cox-Foster D
%A Gildow FE
%A Gray SM
%T Coupling genetics and proteomics to identify aphid proteins associated with vector-specific transmission of Polerovirus (Luteoviridae)
%0 Journal Article
%D 2008
%J J Virol
%P 291-9
%V 82
%N 1
%U http://dx.doi.org/10.1128/JVI.01736-07

%A Kee-Hong Kim
%A Kimberly M. Brown
%A Paul V. Harris
%A James A. Langston
%A Joel R. Cherry
%T A Proteomics Strategy To Discover β-Glucosidases from Aspergillus fumigatus with Two-Dimensional Page In-Gel Activity Assay and Tandem Mass Spectrometry
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4749-4757
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070355i

%A Miguet L
%A Sanglier S
%A Schaeffer C
%A Potier N
%A Mauvieux L
%A Van Dorsselaer A
%T Microparticles: a new tool for plasma membrane sub-cellular proteomic
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 21-34
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953389&dopt=Abstract

%A Reumann S
%A Babujee L
%A Ma C
%A Wienkoop S
%A Siemsen T
%A Antonicelli GE
%A Rasche N
%A Luder F
%A Weckwerth W
%A Jahn O
%T Proteome Analysis of Arabidopsis Leaf Peroxisomes Reveals Novel Targeting Peptides, Metabolic Pathways, and Defense Mechanisms
%0 Journal Article
%D 2007
%J Plant Cell
%P 3170-93
%V 19
%N 10
%U http://dx.doi.org/10.1105/tpc.107.050989

%A Frederick RO
%A Bergeman L
%A Blommel PG
%A Bailey LJ
%A McCoy JG
%A Song J
%A Meske L
%A Bingman CA
%A Riters M
%A Dillon NA
%A Kunert J
%A Yoon JW
%A Lim A
%A Cassidy M
%A Bunge J
%A Aceti DJ
%A Primm JG
%A Markley JL
%A Phillips GN Jr
%A Fox BG
%T Small-scale, semi-automated purification of eukaryotic proteins for structure determination
%0 Journal Article
%D 2007
%J J Struct Funct Genomics
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s10969-007-9032-5
%8 Nov 6, 2007

%A Thibault Mayor
%A Johannes Graumann
%A Jennifer Bryan
%A Michael J. MacCoss,and Raymond J. Deshaies
%T Quantitative Profiling of Ubiquitylated Proteins Reveals Proteasome Substrates and the Substrate Repertoire Influenced by the Rpn10 Receptor Pathway
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1885-1895
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1885?etoc

%A Linding R
%A Juhl Jensen L
%A Pasculescu A
%A Olhovsky M
%A Colwill K
%A Bork P
%A Yaffe MB
%A Pawson T
%T NetworKIN: a resource for exploring cellular phosphorylation networks
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1093/nar/gkm902
%8 Nov 2, 2007

%A Bo Huang
%A Samuel Kim
%A Hongkai Wu
%A Richard N. Zare
%T Use of a Mixture of n-Dodecyl--D-maltoside and Sodium Dodecyl Sulfate in Poly(dimethylsiloxane) Microchips To Suppress Adhesion and Promote Separation of Proteins
%0 Journal Article
%D 2007
%J ANALYTICAL CHEMISTRY
%P 9145-9149
%V 79
%N 23
%U http://dx.doi.org/10.1021/ac071544n

%A Angela J. Ahrendt
%A Sandra L. Tollaksen
%A Carl Lindberg
%A Wenhong Zhu
%A John R. Yates III
%A Kelly P. Nevin
%A György Babnigg
%A Derek R. Lovley
%A Carol S. Giometti
%T Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4148-4157
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200600955

%A Young Nam Kim
%A Hyoung Kyu Kim
%A Mohamad Warda
%A Nari Kim
%A Won Sun Park
%A Ab del Bary Prince
%A Dae Hoon Jeong
%A Dae Shim Lee
%A Ki Tae Kim
%A Jin Han
%T Toward a better understanding of preeclampsia: Comparative proteomic analysis of preeclamptic placentas
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1625-1636
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700034

%A María Soledad Sosa
%A María Romina Girotti
%A Edgardo Salvatierra
%A Federico Prada
%A Juan Antonio López de Olmo
%A Silvia Juárez Gallango
%A Juan Pablo Albar
%A Osvaldo Luis Podhajcer
%A Andrea Sabina Llera
%T Proteomic analysis identified N-cadherin, clusterin, and HSP27 as mediators of SPARC (secreted protein, acidic and rich in cysteines) activity in melanoma cells
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4123-4134
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700255

%A Kall L
%A Canterbury JD
%A Weston J
%A Noble WS
%A Maccoss MJ
%T Semi-supervised learning for peptide identification from shotgun proteomics datasets
%0 Journal Article
%D 2007
%J Nat Methods
%P 923-5
%V 4
%N 11
%U http://dx.doi.org/10.1038/nmeth1113

%A Bitarte N
%A Bandres E
%A Zarate R
%A Ramirez N
%A Garcia-Foncillas J
%T Moving forward in colorectal cancer research, what proteomics has to tell
%0 Journal Article
%D 2007
%J World J Gastroenterol
%P 5813-21
%V 13
%N 44
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17990347&dopt=Abstract

%A Frank Schmidt
%A Hanne K. Hustoft
%A Margarita Strozynski
%A Christiane Dimmler
%A Thomas Rudel
%A Bernd Thiede
%T Quantitative proteome analysis of cisplatin-induced apoptotic Jurkat T cells by stable isotope labeling with amino acids in cell culture, SDS-PAGE, and LC-MALDI-TOF/TOF MS
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4359-4368
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700119

%A Elielson Souza-Rodrígues
%A Josep M. Estanyol
%A Erica Friedrich-Heineken
%A Eva Olmedo
%A Jorge Vera
%A Nuria Canela
%A Sonia Brun
%A Neus Agell
%A Ulrich Hübscher
%A Oriol Bachs
%A Montserrat Jaumot
%T Proteomic analysis of p16ink4a-binding proteins
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4102-4111
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700133

%A Wu J
%A Liu W
%A Bemis A
%A Wang E
%A Qiu Y
%A Morris EA
%A Flannery CR
%A Yang Z
%T Comparative proteomic characterization of articular cartilage tissue from normal donors and patients with osteoarthritis
%0 Journal Article
%D 2007
%J Arthritis Rheum
%P 3675-3684
%V 56
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17968891&dopt=Abstract

%A Karine Gallardo
%A Christian Firnhaber
%A Helene Zuber
%A Delphine Hericher,Maya Belghazi
%A Celine Henry
%A Helge Kuster
%A Richard Thompson
%T A Combined Proteome and Transcriptome Analysis of Developing Medicago truncatula Seeds: Evidence for Metabolic Specialization of Maternal and Filial Tissues
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2165-2179
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2165?etoc

%A Brunt J
%A Hansen R
%A Jamieson DJ
%A Austin B
%T Proteomic analysis of rainbow trout (Oncorhynchus mykiss, Walbaum) serum after administration of probiotics in diets
%0 Journal Article
%D 2007
%J Vet Immunol Immunopathol
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.vetimm.2007.09.010
%8 Oct 2, 2007

%A von der Haar T
%T Optimized protein extraction for quantitative proteomics of yeasts
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17957260&dopt=Abstract

%A Waanders LF
%A Hanke S
%A Mann M
%T Top-Down Quantitation and Characterization of SILAC-Labeled Proteins
%0 Journal Article
%D 2007
%J J Am Soc Mass Spectrom
%P 2058-64
%V 18
%N 11
%U http://dx.doi.org/10.1016/j.jasms.2007.09.001

%A Kurland CG
%A Canback B
%A Berg OG
%T The origins of modern proteomes
%0 Journal Article
%D 2007
%J Biochimie
%P 1454-63
%V 89
%N 12
%U http://dx.doi.org/10.1016/j.biochi.2007.09.004

%A Sundsten T
%A Zethelius B
%A Berne C
%A Bergsten P
%T Plasma proteome changes in type 2 diabetes mellitus subjects with low or high early insulin response
%0 Journal Article
%D 2007
%J Clin Sci (Lond)
%P -
%V 
%N 
%U http://dx.doi.org/10.1042/CS20070323
%8 Oct 26, 2007

%A Sze Wan Shan
%A Mei Kuen Tang
%A Pak Ham Chow
%A Miguel Maroto
%A Dong Qing Cai
%A Kenneth K. H. Lee
%T Induction of growth arrest and polycomb gene expression by reversine allows C2C12 cells to be reprogrammed to various differentiated cell types
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4303-4316
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700636

%A Pascal Mossuz
%A Ali Bouamrani
%A Sabine Brugičre
%A Marie Arlotto
%A Sylvie Hermouet
%A Eric Lippert
%A François Laporte
%A François Girodon
%A Irčne Dobo
%A Praloran Vincent
%A Jérome Garin
%A Jean Yves Cahn
%A François Berger
%T Apolipoprotein A1: A new serum marker correlated to JAK2 V617F proportion at diagnosis in patients with polycythemia vera
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1605-1612
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200601051

%A Izaskun Lacunza
%A Tibor Kremmer
%A José Carlos Díez-Masa
%A Jesús Sanz
%A Mercedes de Frutos
%T Comparison of ?-1-acid glycoprotein isoforms from healthy and cancer patients by capillary IEF
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4447-4451
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200600700

%A Wilma Dormeyer
%A Shabaz Mohammed
%A Bas van Breukelen
%A Jeroen Krijgsveld
%A Albert J. R. Heck
%T Targeted Analysis of Protein Termini
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4634-4645
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070375k

%A Pawlyk AC
%A Ferber M
%A Shah A
%A Pack AI
%A Naidoo N
%T Proteomic analysis of the effects and interactions of sleep deprivation and aging in mouse cerebral cortex
%0 Journal Article
%D 2007
%J J Neurochem
%P 2301-13
%V 103
%N 6
%U http://dx.doi.org/10.1111/j.1471-4159.2007.04949.x

%A Bodenmiller B
%A Malmstrom J
%A Gerrits B
%A Campbell D
%A Lam H
%A Schmidt A
%A Rinner O
%A Mueller LN
%A Shannon PT
%A Pedrioli PG
%A Panse C
%A Lee HK
%A Schlapbach R
%A Aebersold R
%T PhosphoPep-a phosphoproteome resource for systems biology research in Drosophila Kc167 cells
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17940529&dopt=Abstract

%A Faupel M
%A Bonenfant D
%A Schindler P
%A Bertrand E
%A Mueller D
%A Stoeckli M
%A Bitsch F
%A Rohner T
%A Staab D
%A Van Oostrum J
%T Biophotonics applied to proteomics
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 323-38
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953401&dopt=Abstract

%A Nelson MM
%A Jones AR
%A Carmen JC
%A Sinai AP
%A Burchmore R
%A Wastling JM
%T Modulation of the host cell proteome by the intracellular apicomplexan parasite Toxoplasma gondii
%0 Journal Article
%D 2007
%J Infect Immun
%P -
%V 
%N 
%U http://dx.doi.org/10.1128/IAI.01115-07
%8 Oct 29, 2007

%A Angela M. Martin
%A Ting Liu
%A Bert C. Lynn
%A Anthony P. Sinai
%T Elimination of Affinity Reagent Interference for the Mass Spectrometric Detection of Low-Abundance Proteins Following Immunoprecipitation
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4758-4762
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070517a

%A Foss EJ
%A Radulovic D
%A Shaffer SA
%A Ruderfer DM
%A Bedalov A
%A Goodlett DR
%A Kruglyak L
%T Genetic basis of proteome variation in yeast
%0 Journal Article
%D 2007
%J Nat Genet
%P 1369-75
%V 39
%N 11
%U http://dx.doi.org/10.1038/ng.2007.22

%A McLerran D
%A Grizzle WE
%A Feng Z
%A Bigbee WL
%A Banez LL
%A Cazares LH
%A Chan DW
%A Diaz J
%A Izbicka E
%A Kagan J
%A Malehorn DE
%A Malik G
%A Oelschlager D
%A Partin A
%A Randolph T
%A Rosenzweig N
%A Srivastava S
%A Srivastava S
%A Thompson IM
%A Thornquist M
%A Troyer D
%A Yasui Y
%A Zhang
%T Analytical Validation of Serum Proteomic Profiling for Diagnosis of Prostate Cancer; Sources of Sample Bias
%0 Journal Article
%D 2007
%J Clin Chem
%P -
%V 
%N 
%U http://dx.doi.org/10.1373/clinchem.2007.091470
%8 Nov 2, 2007

%A Giselle M. Knudsen
%T Proteomics for Biological Discovery. * Edited by Timothy D. Veenstra and John R. Yates III
%0 Journal Article
%D 2007
%J Brief Bioinform
%P 467-468
%V 8
%N 6
%U http://bib.oxfordjournals.org/cgi/content/full/8/6/467?etoc

%A Sa-nga Pattanakitsakul
%A Kamonthip Rungrojcharoenkit
%A Rattiyaporn Kanlaya
%A Supachok Sinchaikul
%A Sansanee Noisakran
%A Shui-Tein Chen
%A Prida Malasit
%A Visith Thongboonkerd
%T Proteomic Analysis of Host Responses in HepG2 Cells during Dengue Virus Infection
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4592-4600
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070366b

%A Andreas J. Hulsmeier
%A Patricie Paesold-Burda
%A Thierry Hennet
%T N-Glycosylation Site Occupancy in Serum Glycoproteins Using Multiple Reaction Monitoring Liquid Chromatography-Mass Spectrometry
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2132-2138
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2132?etoc

%A McLaughlin WA
%A Chen K
%A Hou T
%A Wang W
%T On the detection of functionally coherent groups of protein domains with an extension to protein annotation
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17937820&dopt=Abstract

%A Lefevre T
%A Thomas F
%A Ravel S
%A Patrel D
%A Renault L
%A Le Bourligu L
%A Cuny G
%A Biron DG
%T Trypanosoma brucei brucei induces alteration in the head proteome of the tsetse fly vector Glossina palpalis gambiensis
%0 Journal Article
%D 2007
%J Insect Mol Biol
%P -
%V 
%N 
%U http://dx.doi.org/10.1111/j.0307-6975.2007.00761.x
%8 Oct 19, 2007

%A Jiang Wu
%A Quazi Shakey
%A Wei Liu
%A Alwin Schuller
%A Maximillian T. Follettie
%T Global Profiling of Phosphopeptides by Titania Affinity Enrichment
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4684-4689
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070481m

%A Alves G
%A Ogurtsov AY
%A Wu WW
%A Wang G
%A Shen RF
%A Yu YK
%T Calibrating E-values for MS2 database search methods
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17983478&dopt=Abstract

%A Birschmann I
%A Mietner S
%A Dittrich M
%A Pfrang J
%A Dandekar T
%A Walter U
%T Use of functional highly purified human platelets for the identification of new proteins of the IPP signaling pathway
%0 Journal Article
%D 2007
%J Thromb Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.thromres.2007.08.022
%8 Oct 9, 2007

%A Spicer V
%A Yamchuk A
%A Cortens J
%A Sousa S
%A Ens W
%A Standing KG
%A Wilkins JA
%A Krokhin OV
%T Sequence-Specific Retention Calculator. A Family of Peptide Retention Time Prediction Algorithms in Reversed-Phase HPLC: Applicability to Various Chromatographic Conditions and Columns
%0 Journal Article
%D 2007
%J Anal Chem
%P 8762-8
%V 79
%N 22
%U http://dx.doi.org/10.1021/ac071474k

%A Julie Rothacker
%A Robert G. Ramsay
%A Daniel Ciznadija
%A Emma Gras
%A Craig B. Neylon
%A Ngaire J. Elwood
%A David Bouchier-Hayes
%A Peter Gibbs
%A Mark A. Rosenthal
%A Edouard C. Nice
%T A novel magnetic bead-based assay with high sensitivity and selectivity for analysis of telomerase in exfoliated cells from patients with bladder and colon cancer
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4435-4446
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200600829

%A Chih-Ching Chang
%A Shu-Hui Chen
%A Shih-Hsin Ho
%A Chun-Yuh Yang
%A Hong-Da Wang
%A Mei-Ling Tsai
%T Proteomic analysis of proteins from bronchoalveolar lavage fluid reveals the action mechanism of ultrafine carbon black-induced lung injury in mice
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4388-4397
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700164

%A Cristina-Maria Valcu and Mihai Valcu
%T Reproducibility of Two-Dimensional Gel Electrophoresis at Different Replication Levels
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4677-4683
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070396e

%A Zhi Dai
%A Jia Fan
%A Yinkun Liu
%A Jian Zhou
%A Dousheng Bai
%A Changjun Tan
%A Kun Guo
%A Yu Zhang
%A Yan Zhao
%A Pengyuan Yang
%T Identification and analysis of ?1,6-fucosylated proteins in human normal liver tissues by a target glycoproteomic approach
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4382-4391
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700233

%A Collins MO
%A Grant SG
%T Supramolecular signalling complexes in the nervous system
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 185-207
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953395&dopt=Abstract

%A Vineis P
%A Perera F
%T Molecular epidemiology and biomarkers in etiologic cancer research: the new in light of the old
%0 Journal Article
%D 2007
%J Cancer Epidemiol Biomarkers Prev
%P 1954-65
%V 16
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17932342&dopt=Abstract

%A Pennington K
%A Beasley CL
%A Dicker P
%A Fagan A
%A English J
%A Pariante CM
%A Wait R
%A Dunn MJ
%A Cotter DR
%T Prominent synaptic and metabolic abnormalities revealed by proteomic analysis of the dorsolateral prefrontal cortex in schizophrenia and bipolar disorder
%0 Journal Article
%D 2007
%J Mol Psychiatry
%P -
%V 
%N 
%U http://dx.doi.org/10.1038/sj.mp.4002098
%8 Oct 16, 2007

%A Fenyo D
%A Beavis RC
%T Informatics development: Challenges and solutions for MALDI mass spectrometry
%0 Journal Article
%D 2008
%J Mass Spectrom Rev
%P 1-19
%V 27
%N 1
%U http://dx.doi.org/10.1002/mas.20152

%A Davies DH
%A Wyatt LS
%A Newman FK
%A Earl PL
%A Chun S
%A Hernandez JE
%A Molina DM
%A Hirst S
%A Moss B
%A Frey SE
%A Felgner PL
%T Antibody Profiling by Proteome Microarray Reveals the Immunogenicity of the Attenuated Smallpox Vaccine, Modified Vaccinia Virus Ankara (MVA) is Comparable to Dryvax(R)
%0 Journal Article
%D 2007
%J J Virol
%P -
%V 
%N 
%U http://dx.doi.org/10.1128/JVI.01706-07
%8 Oct 31, 2007

%A Hu Zhou
%A Jie Dai
%A Quan-Hu Sheng
%A Rong-Xia Li
%A Chia-Hui Shieh
%A Andras Guttman
%A Rong Zeng
%T A fully automated 2-D LC-MS method utilizing online continuous pH and RP gradients for global proteome analysis
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4311-4319
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700463

%A Mary Winters
%A Bhavana Dabir
%A Minshu Yu
%A Elise C. Kohn
%T Constitution and quantity of lysis buffer alters outcome of reverse phase protein microarrays
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4066-4068
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700484

%A Roy K
%A Anba J
%A Corthier G
%A Rigottier-Gois L
%A Monnet V
%A Mistou MY
%T Metabolic Adaptation of Lactococcus lactis in the Digestive Tract: The Example of Response to Lactose
%0 Journal Article
%D 2008
%J J Mol Microbiol Biotechnol
%P 137-44
%V 14
%N 1-3
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17957121&dopt=Abstract

%A Baharvand H
%A Heidari M
%A Ebrahimi M
%A Valadbeigi T
%A Salekdeh GH
%T Proteomic analysis of epithelium-denuded human amniotic membrane as a limbal stem cell niche
%0 Journal Article
%D 2007
%J Mol Vis
%P 1711-21
%V 13
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17960109&dopt=Abstract

%A Mano S
%A Miwa T
%A Nishikawa SI
%A Mimura T
%A Nishimura M
%T The plant organelles database (PODB): a collection of visualized plant organelles and protocols for plant organelle research
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17932059&dopt=Abstract
%8 Oct 11, 2007

%A Yue Ge
%A R. Julian Preston
%A Russell D. Owen
%T Toxicoproteomics and its application to human health risk assessment
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1613-1624
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700490

%A Matharoo-Ball B
%A Ball G
%A Rees R
%T Clinical proteomics: discovery of cancer biomarkers using mass spectrometry and bioinformatics approaches--a prostate cancer perspective
%0 Journal Article
%D 2007
%J Vaccine
%P B110-21
%V 25
%N Suppl 2
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17916461&dopt=Abstract

%A Wu X
%A Tseng CW
%A Edwards N
%T HMMatch: Peptide Identification by Spectral Matching of Tandem Mass Spectra Using Hidden Markov Models
%0 Journal Article
%D 2007
%J J Comput Biol
%P 1025-43
%V 14
%N 8
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17985986&dopt=Abstract

%A Kavanagh DM
%A Powell WE
%A Malik P
%A Lazou V
%A Schirmer EC
%T Organelle proteome variation among different cell types: lessons from nuclear membrane proteins
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 51-76
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953391&dopt=Abstract

%A Sheoran IS
%A Ross AR
%A Olson DJ
%A Sawhney VK
%T Proteomic analysis of tomato (Solanum lycopersicum, formerly hycopersicon esculentum) pollen
%0 Journal Article
%D 2007
%J J Exp Bot
%P 3525-35
%V 58
%N 13
%U http://dx.doi.org/10.1093/jxb/erm199

%A Oleg V. Kovalenko
%A Xiuwei H. Yang
%A Martin E. Hemler
%T A Novel Cysteine Cross-linking Method Reveals a Direct Association between Claudin-1 and Tetraspanin CD9
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1855-1867
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1855?etoc

%A O'leary SJ
%A Poulis BA
%A von Aderkas P
%T Identification of two thaumatin-like proteins (TLPs) in the pollination drop of hybrid yew that may play a role in pathogen defence during pollen collection
%0 Journal Article
%D 2007
%J Tree Physiol
%P 1649-59
%V 27
%N 12
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17938097&dopt=Abstract

%A Knuckles TL
%A Dreher KL
%T Fine oil combustion particle bioavailable constituents induce molecular profiles of oxidative stress, altered function, and cellular injury in cardiomyocytes
%0 Journal Article
%D 2007
%J J Toxicol Environ Health A
%P 1824-37
%V 70
%N 21
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17934955&dopt=Abstract

%A Zahedi RP
%A Moebius J
%A Sickmann A
%T Two-dimensional BAC/SDS-PAGE for membrane proteomics
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 13-20
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953388&dopt=Abstract

%A Christian Johannes Gloeckner
%A Karsten Boldt
%A Annette Schumacher
%A Ronald Roepman
%A Marius Ueffing
%T A novel tandem affinity purification strategy for the efficient isolation and characterisation of native protein complexes
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4228-4234
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700038

%A Sebastian Wiese
%A Thomas Gronemeyer
%A Rob Ofman
%A Markus Kunze
%A Claudia P. Grou
%A Jose A. Almeida
%A Martin Eisenacher
%A Christian Stephan
%A Heiko Hayen
%A Lukas Schollenberger
%A Thomas Korosec
%A Hans R. Waterham
%A Wolfgang Schliebs
%A Ralf Erdmann
%A Johannes Berger
%A Hel
%T Proteomics Characterization of Mouse Kidney Peroxisomes by Tandem Mass Spectrometry and Protein Correlation Profiling
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2045-2057
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2045?etoc

%A Oliver Valerius
%A Malte Kleinschmidt
%A Nicole Rachfall
%A Florian Schulze,Sarai Lopez Marin
%A Michael Hoppert
%A Katrin Streckfuss-Bomeke
%A Claudia Fischer
%A Gerhard H. Braus
%T The Saccharomyces Homolog of Mammalian RACK1, Cpc2/Asc1p, Is Required for FLO11-dependent Adhesive Growth and Dimorphism
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1968-1979
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1968?etoc

%A Frank Schmidt
%A Margarita Strozynski
%A Sandra S. Salus
%A Hilde Nilsen
%A Bernd Thiede
%T Rapid determination of amino acid incorporation by stable isotope labeling with amino acids in cell culture (SILAC)
%0 Journal Article
%D 2007
%J Rapid Communications in Mass Spectrometry
%P 3919-3926
%V 21
%N 23
%U http://dx.doi.org/10.1002/rcm.3290

%A Simonsen AH
%A McGuire J
%A Podust VN
%A Hagnelius NO
%A Nilsson TK
%A Kapaki E
%A Vassilopoulos D
%A Waldemar G
%T A Novel Panel of Cerebrospinal Fluid Biomarkers for the Differential Diagnosis of Alzheimer's Disease versus Normal Aging and Frontotemporal Dementia
%0 Journal Article
%D 2007
%J Dement Geriatr Cogn Disord
%P 434-440
%V 24
%N 6
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17971664&dopt=Abstract

%A Morgan PE
%A Sturgess AD
%A Hennessy A
%A Davies MJ
%T Serum protein oxidation and apolipoprotein CIII levels in people with systemic lupus erythematosus with and without nephritis
%0 Journal Article
%D 2007
%J Free Radic Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1080/10715760701684809
%8 Oct 22, 2007

%A Wang Z
%A Wu W
%A Fang X
%A Wang Y
%A Xiao C
%A Zhao R
%A Wang L
%A Qiao Z
%T Protein expression changed by nicotine in rat vascular smooth muscle cells
%0 Journal Article
%D 2007
%J J Physiol Biochem
%P 161-9
%V 63
%N 2
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17933390&dopt=Abstract

%A Chiu KH
%A Huang HW
%A Mok HK
%T Differential Proteome Analysis of Hagfish Dental and Somatic Skeletal Muscles
%0 Journal Article
%D 2007
%J Mar Biotechnol (NY)
%P 689-700
%V 9
%N 6
%U http://dx.doi.org/10.1007/s10126-007-9020-6

%A Schmitt S
%A Linder M
%A Standker L
%A Hammes HP
%A Preissner KT
%T Identification of CML-modified Proteins in Hemofiltrate of Diabetic Patients by Proteome Analysis
%0 Journal Article
%D 2007
%J Exp Clin Endocrinol Diabetes
%P -
%V 
%N 
%U http://dx.doi.org/10.1055/s-2007-985370
%8 Oct 9, 2007

%A Marc Weinkauf
%A Maximilian Christopeit
%A Wolfgang Hiddemann
%A Martin Dreyling
%T Proteome- and microarray-based expression analysis of lymphoma cell lines identifies a p53-centered cluster of differentially expressed proteins in mantle cell and follicular lymphoma
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4416-4426
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200600831

%A Wen Ding
%A Jennifer J. Hill
%A John Kelly
%T Selective Enrichment of Glycopeptides from Glycoprotein Digests Using Ion-Pairing Normal-Phase Liquid Chromatography
%0 Journal Article
%D 2007
%J ANALYTICAL CHEMISTRY
%P 8891-8899
%V 79
%N 23
%U http://dx.doi.org/10.1021/ac0707535

%A Hong SJ
%A Lessner FH
%A Mahen EM
%A Keiler KC
%T Proteomic identification of tmRNA substrates
%0 Journal Article
%D 2007
%J Proc Natl Acad Sci U S A
%P 17128-33
%V 104
%N 43
%U http://dx.doi.org/10.1073/pnas.0707671104

%A Zhiping Deng
%A Xin Zhang
%A Wenqiang Tang
%A Juan A. Oses-Prieto
%A Nagi Suzuki
%A Joshua M. Gendron
%A Huanjing Chen
%A Shenheng Guan
%A Robert J. Chalkley
%A T. Kaye Peterman
%A Alma L. Burlingame
%A Zhi-Yong Wang
%T A Proteomics Study of Brassinosteroid Response in Arabidopsis
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2058-2071
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2058?etoc

%A Crystal Sao-Fong Cheung
%A Po-Ming Hon
%A Kwok-Pui Fung
%A Shannon Wing-Ngor Au
%T Proteomic characterization of Sophoraflavone J-induced apoptosis in HepG2 cells
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1532-1544
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200601000

%A Gao Y
%A Colletti K
%A Pari GS
%T Identification of Human Cytomegalovirus UL84 viral and cellular encoded binding partners using Proteomics Analysis
%0 Journal Article
%D 2008
%J J Virol
%P 96-104
%V 82
%N 1
%U http://dx.doi.org/10.1128/JVI.01559-07

%A Mueller DR
%A Voshol H
%A Waldt A
%A Wiedmann B
%A Van Oostrum J
%T LC-MALDI MS and MS/MS--an efficient tool in proteome analysis
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 355-80
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953403&dopt=Abstract

%A Jorg Reinders
%A Karina Wagner
%A Rene P. Zahedi
%A Diana Stojanovski
%A BeateEyrich
%A Martin van der Laan
%A Peter Rehling
%A Albert Sickmann
%A Nikolaus Pfanner
%A Chris Meisinger
%T Profiling Phosphoproteins of Yeast Mitochondria Reveals a Role of Phosphorylation in Assembly of the ATP Synthase
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1896-1906
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1896?etoc

%A Shao Chin Lee
%A Nigel Sim
%A Marie-Veronique Clement
%A Sanjiv Kumar Yadav
%A Shazib Pervaiz
%T Dominant negative Rac1 attenuates paclitaxel-induced apoptosis in human melanoma cells through upregulation of heat shock protein 27: A functional proteomic analysis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4112-4122
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700386

%A Wang F
%A Jiang X
%A Feng S
%A Tian R
%A Jiang X
%A Han G
%A Liu H
%A Ye M
%A Zou H
%T Automated injection of uncleaned samples using a ten-port switching valve and a strong cation-exchange trap column for proteome analysis
%0 Journal Article
%D 2007
%J J Chromatogr A
%P 56-62
%V 1171
%N 1-2
%U http://dx.doi.org/10.1016/j.chroma.2007.09.048

%A Liu ZG
%A Zhao LN
%A Liu YW
%A Li TT
%A Fan DM
%A Chen JJ
%T Activation of Cdc2 Contributes to Apoptosis in HPV E6 Expressing Human Keratinocytes in Response to Therapeutic Agents
%0 Journal Article
%D 2007
%J J Mol Biol
%P 334-45
%V 374
%N 2
%U http://dx.doi.org/10.1016/j.jmb.2007.09.031

%A Ning K
%A Leong HW
%T Algorithm for Peptide sequencing by tandem mass spectrometry based on better preprocessing and anti-symmetric computational model
%0 Journal Article
%D 2007
%J Comput Syst Bioinformatics Conf
%P 19-30
%V 6
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17951809&dopt=Abstract

%A Onda T
%A Uzawa K
%A Nakashima D
%A Saito K
%A Iwadate Y
%A Seki N
%A Shibahara T
%A Tanzawa H
%T Lin-7C/VELI3/MALS-3: An Essential Component in Metastasis of Human Squamous Cell Carcinoma
%0 Journal Article
%D 2007
%J Cancer Res
%P 9643-8
%V 67
%N 20
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17942893&dopt=Abstract

%A Han X
%T Cancer molecular pattern discovery by subspace consensus kernel classification
%0 Journal Article
%D 2007
%J Comput Syst Bioinformatics Conf
%P 55-65
%V 6
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17951812&dopt=Abstract

%A Zhang LB
%A Zhu HX
%A Lun YN
%A Yan DM
%A Yu LY
%A Du BR
%A Zhu X
%T Proteomic Analysis of Macrophages: A Potential Way to Identify Novel Proteins Associated with Activation of Macrophages for Tumor Cell Killing
%0 Journal Article
%D 2007
%J Cell Mol Immunol
%P 359-367
%V 4
%N 5
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17976316&dopt=Abstract

%A Jonas Grossmann
%A Bernd Fischer
%A Katja Baerenfaller
%A Judith Owiti
%A Joachim M. Buhmann
%A Wilhelm Gruissem
%A Sacha Baginsky
%T A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4245-4254
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700474

%A Bennett KP
%A Bergeron C
%A Acar E
%A Klees RF
%A Vandenberg SL
%A Yener B
%A Plopper GE
%T Proteomics reveals multiple routes to the osteogenic phenotype in mesenchymal stem cells
%0 Journal Article
%D 
%J 
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17949499&dopt=Abstract

%A Samy Gobaa
%A Emmanuelle Bancel
%A Geert Kleijer
%A Peter Stamp
%A Gérard Branlard
%T Effect of the 1BL.1RS translocation on the wheat endosperm, as revealed by proteomic analysis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4349-4357
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700488

%A Wang YD
%A Wu JD
%A Jiang ZL
%A Wang YB
%A Wang XH
%A Liu C
%A Tong MQ
%T Comparative Proteome Analysis of Neural Retinas from Type 2 Diabetic Rats by Two-dimensional Electrophoresis
%0 Journal Article
%D 2007
%J Curr Eye Res
%P 891-901
%V 32
%N 10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17963109&dopt=Abstract

%A Qiao L
%A Liu Y
%A Hudson SP
%A Yang P
%A Magner E
%A Liu B
%T A Nanoporous Reactor for Efficient Proteolysis
%0 Journal Article
%D 2007
%J Chemistry
%P -
%V 
%N 
%U http://dx.doi.org/10.1002/chem.200701102
%8 Oct 24, 2007

%A Zhang C
%A Liu P
%A Wang N
%A Li Y
%A Wang L
%T Comparison of two tandem mass spectrometry-based methods for analyzing the proteome of healthy human lens fibers
%0 Journal Article
%D 2007
%J Mol Vis
%P 1873-7
%V 13
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17960125&dopt=Abstract

%A Rabilloud T
%T Keynotes on membrane proteomics
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 3-11
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953387&dopt=Abstract

%A Tabata T
%A Sato T
%A Kuromitsu J
%A Oda Y
%T Pseudo Internal Standard Approach for Label-Free Quantitative Proteomics
%0 Journal Article
%D 2007
%J Anal Chem
%P 8440-5
%V 79
%N 22
%U http://dx.doi.org/10.1021/ac701628m

%A Lin YZ
%A Chen HY
%A Kao R
%A Chang SP
%A Chang SJ
%A Lai EM
%T Proteomic analysis of rice defense response induced by probenazole
%0 Journal Article
%D 2007
%J Phytochemistry
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.phytochem.2007.09.005
%8 Oct 18, 2007

%A Liu Y
%A Liu B
%A Yang P
%A Girault HH
%T Microfluidic enzymatic reactors for proteome research
%0 Journal Article
%D 2007
%J Anal Bioanal Chem
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s00216-007-1664-6
%8 Oct 23, 2007

%A Manfred Wuhrer
%A Jord C. Stam
%A Fleur E. van de Geijn
%A Carolien A. M. Koeleman
%A C. Theo Verrips
%A Radboud J. E. M. Dolhain
%A Cornelis H. Hokke
%A André M. Deelder
%T Glycosylation profiling of immunoglobulin G (IgG) subclasses from human serum
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4070-4081
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200700289

%A Roncada P
%A Begni B
%A Amadori M
%A Cristoni S
%A Archetti IL
%A Boldetti C
%A Fortin R
%A Deriu F
%A Greppi GF
%T Blood serum proteome for welfare evaluation in pigs
%0 Journal Article
%D 2007
%J Vet Res Commun
%P 321-5
%V 31
%N Suppl 1
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17682905&dopt=Abstract

%A Oliver Drews
%A Robert Wildgruber
%A Chenggong Zong
%A Ute Sukop
%A Mikkel Nissum
%A Gerhard Weber
%A Aldrin V. Gomes
%A Peipei Ping
%T Mammalian Proteasome Subpopulations with Distinct Molecular Compositions and Proteolytic Activities
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2021-2031
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/2021?etoc

%A Christoph Wierling
%A Ralf Herwig
%A Hans Lehrach
%T Resources, standards and tools for systems biology
%0 Journal Article
%D 2007
%J Brief Funct Genomic Proteomic
%P 240-251
%V 6
%N 3
%U http://bfgp.oxfordjournals.org/cgi/content/abstract/6/3/240?etoc

%A Juan Madoz-Gurpide
%A Marta Canamero
%A Lydia Sanchez
%A Jose Solano
%A Patricia Alfonso
%A J. Ignacio Casal
%T A Proteomics Analysis of Cell Signaling Alterations in Colorectal Cancer
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2150-2164
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2150?etoc

%A Jinfeng Liu
%A Yun Cai
%A Jinglan Wang
%A Qi Zhou
%A Bing Yang
%A Zhuang Lu
%A Liyan Jiao
%A Dongyang Zhang
%A Shaohui Sui
%A Ying Jiang
%A Wantao Ying
%A Xiaohong Qian
%T Phosphoproteome profile of human liver Chang's cell based on 2-DE with fluorescence staining and MALDI-TOF/TOF-MS
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4348-4358
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200600696

%A Yamaguchi Y
%A Miyagi Y
%A Baba H
%T Two-dimensional electrophoresis with cationic detergents: A powerful tool for the proteomic analysis of myelin proteins. Part 2: Analytical aspects
%0 Journal Article
%D 2007
%J J Neurosci Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1002/jnr.21549
%8 Oct 25, 2007

%A Liu-Ya Tang
%A Ning Deng
%A Lian-Shui Wang
%A Jie Dai
%A Zheng-Long Wang
%A Xiao-Sheng Jiang
%A Su-Jun Li
%A Long Li
%A Quan-Hu Sheng
%A Dian-Qing Wu
%A Lin Li
%A Rong Zeng
%T Quantitative Phosphoproteome Profiling of Wnt3a-mediated Signaling Network: Indicating the Involvement of Ribonucleoside-diphosphate Reductase M2 Subunit Phosphorylation at Residue Serine 20 in Canonical Wnt Signal Transduction
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1952-1967
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1952?etoc

%A Song Z
%A Chen L
%A Zhang C
%A Xu D
%T Design and Implementation of Probability-Based Scoring Function for Peptide Mass Fingerprinting Protein Identification
%0 Journal Article
%D 2006
%J Conf Proc IEEE Eng Med Biol Soc
%P 4556-4559
%V 1
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17946250&dopt=Abstract

%A Wang M
%A Feng W
%A Lu W
%A Li B
%A Wang B
%A Zhu M
%A Wang Y
%A Yuan H
%A Zhao Y
%A Chai Z
%T Quantitative Analysis of Proteins via Sulfur Determination by HPLC Coupled to Isotope Dilution ICPMS with a Hexapole Collision Cell
%0 Journal Article
%D 2007
%J Anal Chem
%P 9128-9134
%V 79
%N 23
%U http://dx.doi.org/10.1021/ac071483t

%A Xia K
%A Manning M
%A Hesham H
%A Lin Q
%A Bystroff C
%A Colon W
%T Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE
%0 Journal Article
%D 2007
%J Proc Natl Acad Sci U S A
%P 17329-34
%V 104
%N 44
%U http://dx.doi.org/10.1073/pnas.0705417104

%A Dodds ED
%A Clowers BH
%A Hagerman PJ
%A Lebrilla CB
%T Systematic characterization of high mass accuracy influence on false discovery and probability scoring in peptide mass fingerprinting
%0 Journal Article
%D 2008
%J Anal Biochem
%P 156-66
%V 372
%N 2
%U http://dx.doi.org/10.1016/j.ab.2007.10.009

%A Simone Lemeer
%A Rob Ruijtenbeek
%A Martijn W. H. Pinkse
%A Chris Jopling
%A Albert J. R. Heck
%A Jeroen den Hertog
%A Monique Slijper
%T Endogenous Phosphotyrosine Signaling in Zebrafish Embryos
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2088-2099
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/abstract/6/12/2088?etoc

%A Uawithya P
%A Pisitkun T
%A Ruttenberg BE
%A Knepper MA
%T Transcriptional Profiling of Native Inner Medullary Collecting Duct Cells from Rat Kidney
%0 Journal Article
%D 2007
%J Physiol Genomics
%P -
%V 
%N 
%U http://dx.doi.org/10.1152/physiolgenomics.00201.2007
%8 Oct 23, 2007

%A Fang Yang
%A Junjun Wang
%A Xiaojie Li
%A Tianyi Ying
%A Shiyan Qiao
%A Defa Li
%A Guoyao Wu
%T 2-DE and MS analysis of interactions between Lactobacillus fermentum I5007 and intestinal epithelial cells
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4330-4339
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700166

%A Meng Y
%A Liu XH
%A Ma X
%A Shen Y
%A Fan L
%A Leng J
%A Liu JY
%A Sha JH
%T The protein profile of mouse mature cumulus-oocyte complex
%0 Journal Article
%D 2007
%J Biochim Biophys Acta
%P 1477-90
%V 1774
%N 11
%U http://dx.doi.org/10.1016/j.bbapap.2007.08.026

%A Sanjeev Shukla
%A Rukmini B. Govekar
%A Ravi Sirdeshmukh
%A Curam S. Sundaram
%A Anil K. D'Cruz
%A K. Alok Pathak
%A Shubhada V. Kane
%A Surekha M. Zingde
%T Tumor antigens eliciting autoantibody response in cancer of gingivo-buccal complex
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1592-1604
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700206

%A Kasper CE
%T Genomics and proteomics methodologies for vulnerable populations research
%0 Journal Article
%D 2007
%J Annu Rev Nurs Res
%P 191-217
%V 25
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17958293&dopt=Abstract

%A Hunsucker SW
%A Accurso FJ
%A Duncan MW
%T Proteomics in pediatric research and practice
%0 Journal Article
%D 2007
%J Adv Pediatr
%P 9-28
%V 54
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17918464&dopt=Abstract

%A Wenyan Shen
%A Hui Liu
%A Yingnian Yu
%T Proteomic Analysis of Cellular Responses to Different Concentrations of anti-Benzo(a)pyrene-7,8-dihydrodiol-9,10-epoxide in Human Amniotic Epithelial FL Cells
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4737-4748
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070406b

%A Liyuan Li
%A Masaru Wada
%A Atsushi Yokota
%T Cytoplasmic proteome reference map for a glutamic acid-producing Corynebacterium glutamicum ATCC 14067
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4317-4322
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700269

%A Patrauchan MA
%A Sarkisova SA
%A Franklin MJ
%T Strain-specific proteome responses of Pseudomonas aeruginosa to biofilm-associated growth and to calcium
%0 Journal Article
%D 2007
%J Microbiology
%P 3838-3851
%V 153
%N Pt 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17975093&dopt=Abstract

%A Masako Nakanishi
%A Antoine Ménoret
%A Glenn S. Belinsky
%A Charles Giardina
%A Cassandra A. Godman
%A Anthony T. Vella
%A Daniel W. Rosenberg
%T Utilizing endoscopic technology to reveal real-time proteomic alterations in response to chemoprevention
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1660-1666
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700545

%A Yanwei Sun
%A Xinyu Deng
%A Wenrui Li
%A Yujuan Yan
%A Handong Wei
%A Ying Jiang
%A Fuchu He
%T Liver proteome analysis of adaptive response in rat immediately after partial hepatectomy
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4398-4407
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200600913

%A Jolyne Drummelsmith
%A Eric Winstall
%A Michel G. Bergeron
%A Guy G. Poirier
%A Marc Ouellette
%T Comparative Proteomics Analyses Reveal a Potential Biomarker for the Detection of Vancomycin-Intermediate Staphylococcus aureus Strains
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4690-4702
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070521m

%A Diedrich M
%A Tadic J
%A Mao L
%A Wacker MA
%A Nebrich G
%A Hetzer R
%A Regitz-Zagrosek V
%A Klose J
%T Heart protein expression related to age and sex in mice and humans
%0 Journal Article
%D 2007
%J Int J Mol Med
%P 865-74
%V 20
%N 6
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17982696&dopt=Abstract

%A Jordan JR
%A Moore EE
%A Damle SS
%A Eckels P
%A Johnson JL
%A Roach JP
%A Redzic JS
%A Hansen KC
%A Banerjee A
%T Gelsolin is Depleted in Post-Shock Mesenteric Lymph
%0 Journal Article
%D 2007
%J J Surg Res
%P 130-5
%V 143
%N 1
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17950082&dopt=Abstract

%A Warsinke A
%T Electrochemical Biochips for Protein Analysis
%0 Journal Article
%D 2007
%J Adv Biochem Eng Biotechnol
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/10_2007_079
%8 Oct 11, 2007

%A Martin Kussmann
%A Michael Affolter
%A Kornél Nagy
%A Birgit Holst
%A Laurent B. Fay
%T Mass spectrometry in nutrition: Understanding dietary health effects at the molecular level
%0 Journal Article
%D 2007
%J Mass Spectrometry Reviews
%P 727-750
%V 26
%N 6
%U http://dx.doi.org/10.1002/mas.20147

%A David M. Good
%A Matthew Wirtala
%A Graeme C. McAlister
%A Joshua J. Coon
%T Performance Characteristics of Electron Transfer Dissociation Mass Spectrometry
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1942-1951
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1942?etoc

%A Bruce A. Julian
%A Stefan Wittke
%A Jan Novak
%A David M. Good
%A Joshua J. Coon
%A Markus Kellmann
%A Petra Zürbig
%A Eric Schiffer
%A Marion Haubitz
%A Zina Moldoveanu
%A Shannon M. Calcatera
%A Robert J. Wyatt
%A Josef Sýkora
%A Eva Sládková
%A Ondrej Hes
%A Harald Mischak
%A Brendan
%T Electrophoretic methods for analysis of urinary polypeptides in IgA-associated renal diseases
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4469-4483
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700237

%A Alves P
%A Arnold RJ
%A Novotny MV
%A Radivojac P
%A Reilly JP
%A Tang H
%T Advancement in protein inference from shotgun proteomics using peptide detectability
%0 Journal Article
%D 2007
%J Pac Symp Biocomput
%P 409-20
%V 12
%N 
%U http://psb.stanford.edu/psb-online/proceedings/psb07/abstracts/2007_p409.html

%A David M. Good
%A Visith Thongboonkerd
%A Jan Novak
%A Jean-Loup Bascands
%A Joost P. Schanstra
%A Joshua J. Coon
%A Anna Dominiczak
%A Harald Mischak
%T Body Fluid Proteomics for Biomarker Discovery: Lessons from the Past Hold the Key to Success in the Future
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4549-4555
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070529w

%A Bai F
%A Witzmann FA
%T Synaptosome proteomics
%0 Journal Article
%D 2007
%J Subcell Biochem
%P 77-98
%V 43
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17953392&dopt=Abstract

%A Katz-Jaffe MG
%A Larman MG
%A Sheehan CB
%A Gardner DK
%T Exposure of mouse oocytes to 1,2-propanediol during slow freezing alters the proteome
%0 Journal Article
%D 2007
%J Fertil Steril
%P -
%V 
%N 
%U http://dx.doi.org/10.1016/j.fertnstert.2007.03.098
%8 Oct 31, 2007

%A Debora Bonenfant
%A Harry Towbin
%A Michele Coulot
%A Patrick Schindler
%A Dieter R. Mueller
%A Jan van Oostrum
%T Analysis of Dynamic Changes in Post-translational Modifications of Human Histones during Cell Cycle by Mass Spectrometry
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1917-1932
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1917?etoc

%A Paolo Nanni
%A Daniela Parisi
%A Giulia Roda
%A Monica Casale
%A Andrea Belluzzi
%A Enrico Roda
%A Lloyd Mayer
%A Aldo Roda
%T Serum protein profiling in patients with inflammatory bowel diseases using selective solid-phase bulk extraction, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and chemometric data analysis
%0 Journal Article
%D 2007
%J Rapid Communications in Mass Spectrometry
%P 4142-4148
%V 21
%N 24
%U http://dx.doi.org/10.1002/rcm.3323

%A Kastrinaki MC
%A Sidiropoulos P
%A Roche S
%A Ringe J
%A Lehmann S
%A Kritikos H
%A Vlahava VM
%A Delorme B
%A Eliopoulos G
%A Jorgensen C
%A Charbord P
%A Haupl T
%A Boumpas DT
%A Papadaki HA
%T Functional, molecular and proteomic characterization of bone marrow mesenchymal stem cells in rheumatoid arthritis
%0 Journal Article
%D 2007
%J Ann Rheum Dis
%P -
%V 
%N 
%U http://dx.doi.org/10.1136/ard.2007.076174
%8 Oct 5, 2007

%A Gilbert S. Omenn
%A Ruedi Aebersold
%A Young-Ki Paik
%T HUPO Plasma Proteome Project 2007 Workshop Report
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 2252-2253
%V 6
%N 12
%U http://www.mcponline.org/cgi/content/full/6/12/2252?etoc

%A Xin Zhao
%A Quan Li
%A Lei Zhao
%A XiaoPing Pu
%T Proteome analysis of substantia nigra and striatal tissue in the mouse MPTP model of Parkinson's disease
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1559-1569
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700077

%A Sandor Spisak
%A Zsolt Tulassay
%A Bela Molnar
%A Andras Guttman
%T Protein microchips in biomedicine and biomarker discovery
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4261-4273
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700539

%A Rafael Montes-Nieto
%A Carlos A. Fuentes-Almagro
%A Daniel Bonilla-Valverde
%A María-José Prieto-Álamo
%A Juan Jurado
%A Montserrat Carrascal
%A José Luis Gómez-Ariza
%A Juan López-Barea
%A Carmen Pueyo
%T Proteomics in free-living Mus spretus to monitor terrestrial ecosystems
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4376-4387
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700409

%A Northen TR
%A Yanes O
%A Northen MT
%A Marrinucci D
%A Uritboonthai W
%A Apon J
%A Golledge SL
%A Nordstrom A
%A Siuzdak G
%T Clathrate nanostructures for mass spectrometry
%0 Journal Article
%D 2007
%J Nature
%P 1033-6
%V 449
%N 7165
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17960240&dopt=Abstract

%A Dubravko Rendi?
%A Iain B. H. Wilson
%A Gert Lubec
%A Martin Gutternigg
%A Friedrich Altmann
%A Renaud Léonard
%T Adaptation of the ?in-gel release method? to N-glycome analysis of low-milligram amounts of material
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4484-4492
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700098

%A Li J
%A Wang T
%A Zhang Z
%A Pan Y
%T Proteomic Analysis of Royal Jelly from Three Strains of Western Honeybees (Apis mellifera)
%0 Journal Article
%D 2007
%J J Agric Food Chem
%P 8411-8422
%V 55
%N 21
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17927147&dopt=Abstract

%A Qiangwei Xia
%A Tiansong Wang
%A Fred Taub
%A Yoonsuk Park
%A Cindy A. Capestany
%A Richard J. Lamont
%A Murray Hackett
%T Quantitative proteomics of intracellular Porphyromonas gingivalis
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4323-4337
%V 7
%N 23
%U http://dx.doi.org/10.1002/pmic.200700543

%A Begoña Casado
%A Paolo Iadarola
%A Lewis K. Pannell
%A Maurizio Luisetti
%A Angelo Corsico
%A Elena Ansaldo
%A Ilaria Ferrarotti
%A Piera Boschetto
%A James N. Baraniuk
%T Protein Expression in Sputum of Smokers and Chronic Obstructive Pulmonary Disease Patients: A Pilot Study by CapLC-ESI-Q-TOF
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4615-4623
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070440q

%A Barnes FA
%A Bingle L
%A Bingle CD
%T Pulmonary Genomics, Proteomics and PLUNCs
%0 Journal Article
%D 2007
%J Am J Respir Cell Mol Biol
%P -
%V 
%N 
%U http://dx.doi.org/10.1165/rcmb.2007-0388TR
%8 Nov 1, 2007

%A Ekstrom S
%A Wallman L
%A Helldin G
%A Nilsson J
%A Marko-Varga G
%A Laurell T
%T Polymeric integrated selective enrichment target (ISET) for solid-phase-based sample preparation in MALDI-TOF MS
%0 Journal Article
%D 2007
%J J Mass Spectrom
%P 1445-1452
%V 42
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17960572&dopt=Abstract

%A Elliott MH
%A Nash ZA
%A Takemori N
%A Fliesler SJ
%A McClellan ME
%A Naash MI
%T Differential distribution of proteins and lipids in detergent-resistant and detergent-soluble domains in rod outer segment plasma membranes and disks
%0 Journal Article
%D 2007
%J J Neurochem
%P -
%V 
%N 
%U http://dx.doi.org/10.1111/j.1471-4159.2007.04971.x
%8 Oct 18, 2007

%A Peirce MJ
%A Saklatvala J
%A Cope AP
%A Wait R
%T Mapping lymphocyte plasma membrane proteins: a proteomic approach
%0 Journal Article
%D 2007
%J Methods Mol Med
%P 361-7
%V 136
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17983160&dopt=Abstract

%A Deepti Bhushan
%A Aarti Pandey
%A Mani Kant Choudhary
%A Asis Datta
%A Subhra Chakraborty
%A Niranjan Chakraborty
%T Comparative Proteomics Analysis of Differentially Expressed Proteins in Chickpea Extracellular Matrix during Dehydration Stress
%0 Journal Article
%D 2007
%J Mol Cell Proteomics
%P 1868-1884
%V 6
%N 11
%U http://www.mcponline.org/cgi/content/abstract/6/11/1868?etoc

%A Laspiur JP
%A Anderson ER
%A Ciborowski P
%A Wojna V
%A Rozek W
%A Duan F
%A Mayo R
%A Rodriguez E
%A Plaud-Valentin M
%A Rodriguez-Orengo J
%A Gendelman HE
%A Melendez LM
%T CSF proteomic fingerprints for HIV-associated cognitive impairment
%0 Journal Article
%D 2007
%J J Neuroimmunol
%P 157-70
%V 192
%N 1-2
%U http://dx.doi.org/10.1016/j.jneuroim.2007.08.004

%A Ru Chen
%A Sheng Pan
%A Ruedi Aebersold
%A Teresa A. Brentnall
%T Proteomics studies of pancreatic cancer
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1582-1591
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700414

%A Timperio AM
%A D'Amici GM
%A Barta C
%A Loreto F
%A Zolla L
%T Proteomic, pigment composition, and organization of thylakoid membranes in iron-deficient spinach leaves
%0 Journal Article
%D 2007
%J J Exp Bot
%P 3695-3710
%V 58
%N 13
%U http://dx.doi.org/10.1093/jxb/erm219

%A Jinshan Wang
%A Peter Gutierrez
%A Nathan Edwards
%A Catherine Fenselau
%T Integration of 18O Labeling and Solution Isoelectric Focusing in a Shotgun Analysis of Mitochondrial Proteins
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4601-4607
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070401e

%A Waters M
%A Stasiewicz S
%A Merrick BA
%A Tomer K
%A Bushel P
%A Paules R
%A Stegman N
%A Nehls G
%A Yost KJ
%A Johnson CH
%A Gustafson SF
%A Xirasagar S
%A Xiao N
%A Huang CC
%A Boyer P
%A Chan DD
%A Pan Q
%A Gong H
%A Taylor J
%A Choi D
%A Rashid A
%A Ahmed A
%A Howle R
%A Selkirk J
%A Tennant R
%A Fos
%T CEBS Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data
%0 Journal Article
%D 2007
%J Nucleic Acids Res
%P -
%V 
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17962311&dopt=Abstract
%8 Oct 25, 2007

%A Jain KK
%T Recent advances in clinical oncoproteomics
%0 Journal Article
%D 2007
%J J BUON
%P S31-8
%V 12
%N Suppl 1
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17935275&dopt=Abstract

%A Paul Dowling
%A Lorraine O'Driscoll
%A Paula Meleady
%A Michael Henry
%A Shunil Roy
%A Jo Ballot
%A Michael Moriarty
%A John Crown
%A Martin Clynes
%T 2-D difference gel electrophoresis of the lung squamous cell carcinoma versus normal sera demonstrates consistent alterations in the levels of ten specific proteins
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4302-4310
%V 28
%N 23
%U http://dx.doi.org/10.1002/elps.200700246

%A Robert Caesar
%A Johan Palmfeldt
%A John S. Gustafsson
%A Ellinor Pettersson
%A Sayed Hossein Hashemi
%A Anders Blomberg
%T Comparative proteomics of industrial lager yeast reveals differential expression of the cerevisiae and non-cerevisiae parts of their genomes
%0 Journal Article
%D 2007
%J PROTEOMICS
%P 4135-4147
%V 7
%N 22
%U http://dx.doi.org/10.1002/pmic.200601020

%A Harris L
%A Fritsche H
%A Mennel R
%A Norton L
%A Ravdin P
%A Taube S
%A Somerfield MR
%A Hayes DF
%A Bast RC Jr
%T American Society of Clinical Oncology 2007 Update of Recommendations for the Use of Tumor Markers in Breast Cancer
%0 Journal Article
%D 2007
%J J Clin Oncol
%P 5287-312
%V 25
%N 33
%U http://dx.doi.org/10.1200/JCO.2007.14.2364

%A Matthew J. McKay
%A Jamie Sherman
%A Matthew T. Laver
%A Mark S. Baker
%A Stephen J. Clarke
%A Mark P. Molloy
%T The development of multiple reaction monitoring assays for liver-derived plasma proteins
%0 Journal Article
%D 2007
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 1570-1581
%V 1
%N 12
%U http://dx.doi.org/10.1002/prca.200700305

%A José Ángel Gómez-Ruiz
%A Mercedes Ramos
%A Isidra Recio
%T Identification of novel angiotensin-converting enzyme-inhibitory peptides from ovine milk proteins by CE-MS and chromatographic techniques
%0 Journal Article
%D 2007
%J ELECTROPHORESIS
%P 4202-4211
%V 28
%N 22
%U http://dx.doi.org/10.1002/elps.200700324

%A Dong-Sic Choi
%A Jae-Min Lee
%A Gun Wook Park
%A Hyeon-Woo Lim
%A Joo Young Bang
%A Yoon-Keun Kim
%A Kyung-Hoon Kwon
%A Ho Jeong Kwon
%A Kwang Pyo Kim
%A Yong Song Gho
%T Proteomic Analysis of Microvesicles Derived from Human Colorectal Cancer Cells
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4646-4655
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070192y

%A Andrew Smith
%A Kei Cheung
%A Michael Krauthammer
%A Martin Schultz
%A Mark Gerstein
%T Leveraging the structure of the Semantic Web to enhance information retrieval for proteomics
%0 Journal Article
%D 2007
%J Bioinformatics
%P 3073-3079
%V 23
%N 22
%U http://bioinformatics.oxfordjournals.org/cgi/content/abstract/23/22/3073?etoc

%A Qingzhong Wang
%A Jun Yue
%A Lu Zhang
%A Ying Xu
%A Jiazhen Chen
%A Min Zhang
%A Bingdong Zhu
%A Hongyan Wang
%A Honghai Wang
%T A Newly Identified 191A/C Mutation in the Rv2629 Gene that Was Significantly Associated with Rifampin Resistance in Mycobacterium tuberculosis
%0 Journal Article
%D 2007
%J JOURNAL OF PROTEOME RESEARCH
%P 4564-4571
%V 6
%N 12
%U http://dx.doi.org/10.1021/pr070242z

%A Gouraud SS
%A Yao ST
%A Heesom KJ
%A Paton JF
%A Murphy D
%T 14-3-3 proteins within the hypothalamic-neurohypophyseal system of the osmotically stressed rat: transcriptomic and proteomic studies
%0 Journal Article
%D 2007
%J J Neuroendocrinol
%P 913-22
%V 19
%N 11
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=17927670&dopt=Abstract