TY - JOUR A1 - Mavroudi A1 - Seferina; Papadimitriou A1 - Stergios; Kossida A1 - Sophia; Likothanassis A1 - Spyridon D.; Vlahou A1 - Antonia T1 - Computational Methods and Algorithms for Mass-Spectrometry Based Differential Proteomics JO - Current Proteomics Y1 - 2007 SP - 223 EP - 234 VL - 4 IS - 4 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000004/art00004 ER - TY - JOUR A1 - Xin Yi A1 - John M. Luk A1 - Nikki P. Lee A1 - Jirun Peng A1 - Xisheng Leng A1 - Xin-Yuan Guan A1 - George K. Lau A1 - Laura Beretta A1 - Sheung-Tat Fan T1 - Association of Mortalin (HSPA9) with Liver Cancer Metastasis and Prediction for Early Tumor Recurrence JO - Mol Cell Proteomics Y1 - 2008 SP - 315 EP - 325 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/315?etoc ER - TY - JOUR A1 - Thomas O. Metz A1 - Wei-Jun Qian A1 - Jon M. Jacobs A1 - Marina A. Gritsenko A1 - Ronald J. Moore A1 - Ashoka D. Polpitiya A1 - Matthew E. Monroe A1 - David G. Camp II A1 - Patricia W. Mueller A1 - Richard D. Smith T1 - Application of Proteomics in the Discovery of Candidate Protein Biomarkers in a Diabetes Autoantibody Standardization Program Sample Subset JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 698 EP - 707 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700606w ER - TY - JOUR A1 - Lin WY A1 - Chang JY A1 - Hish CH A1 - Pan TM T1 - Profiling the Monascus pilosus Proteome during Nitrogen Limitation JO - J Agric Food Chem Y1 - 2008 SP - 433 EP - 41 VL - 56 IS - 2 UR - http://dx.doi.org/10.1021/jf072420e ER - TY - JOUR A1 - Mertens B T1 - Organizing a competition on clinical mass spectrometry based proteomic diagnosis JO - Y1 - SP - EP - VL - IS - UR - http://www.bepress.com/sagmb/vol7/iss2/art3 ER - TY - JOUR A1 - Sheng Pan A1 - John Rush A1 - Elaine R. Peskind A1 - Douglas Galasko A1 - Kathryn Chung A1 - Joseph Quinn A1 - Joseph Jankovic A1 - James B. Leverenz A1 - Cyrus Zabetian A1 - Catherine Pan A1 - Yan Wang A1 - Jung Hun Oh A1 - Jean Gao A1 - Jianpeng Zhang A1 - Thomas Montine A1 - Jing Zhang T1 - Application of Targeted Quantitative Proteomics Analysis in Human Cerebrospinal Fluid Using a Liquid Chromatography Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Tandem Mass Spectrometer (LC MALDI TOF/TOF) Platform JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 720 EP - 730 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700630x ER - TY - JOUR A1 - Smit S A1 - Hoefsloot HC A1 - Smilde AK T1 - Statistical data processing in clinical proteomics JO - J Chromatogr B Analyt Technol Biomed Life Sci Y1 - 2007/11/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jchromb.2007.10.042 ER - TY - JOUR A1 - Vathany Kulasingam A1 - Christopher R. Smith A1 - Ihor Batruch A1 - Alan Buckler A1 - Douglas A. Jeffery A1 - Eleftherios P. Diamandis T1 - “Product Ion Monitoring” Assay for Prostate-Specific Antigen in Serum Using a Linear Ion-Trap JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 640 EP - 647 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr7005999 ER - TY - JOUR A1 - Abu-Farha M A1 - Elisma F A1 - Figeys D T1 - Identification of Protein-Protein Interactions by Mass Spectrometry Coupled Techniques JO - Adv Biochem Eng Biotechnol Y1 - 2008/01/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/10_2007_091 ER - TY - JOUR A1 - Ana Pereira Navaza A1 - Jorge Ruiz Encinar A1 - Montserrat Carrascal A1 - Joaquín Abi n A1 - Alfredo Sanz-Medel T1 - Absolute and Site-Specific Quantification of Protein Phosphorylation Using Integrated Elemental and Molecular Mass Spectrometry: Its Potential To Assess Phosphopeptide Enrichment Procedures JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 1777 EP - 1787 VL - 80 IS - 5 UR - http://dx.doi.org/10.1021/ac7022316 ER - TY - JOUR A1 - Heping Cao A1 - Leesa J Deterding A1 - Perry J Blackshear T1 - Phosphorylation site analysis of the anti-inflammatory and mRNA-destabilizing protein tristetraprolin JO - Expert Review of Proteomics Y1 - 2007 SP - 711 EP - 726 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.711 ER - TY - JOUR A1 - Lucia De Monte A1 - Francesca Sanvito A1 - Stefano Olivieri A1 - Fiammetta Viganò A1 - Claudio Doglioni A1 - Matteo Frasson A1 - Marco Braga A1 - Angela Bachi A1 - Paolo Dellabona A1 - Maria Pia Protti A1 - Massimo Alessio T1 - Serological Immunoreactivity against Colon Cancer Proteome Varies upon Disease Progression JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 504 EP - 514 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070360m ER - TY - JOUR A1 - Gevaert K A1 - Impens F A1 - Van Damme P A1 - Ghesquière B A1 - Hanoulle X A1 - Vandekerckhove J T1 - Applications of diagonal chromatography for proteome-wide characterization of protein modifications and activity-based analyses JO - FEBS J Y1 - 2007 SP - 6277 EP - 89 VL - 274 IS - 24 UR - http://dx.doi.org/10.1111/j.1742-4658.2007.06149.x ER - TY - JOUR A1 - Ye J A1 - Liu H A1 - Kirmiz C A1 - Lebrilla CB A1 - Rocke DM T1 - On the analysis of glycomics mass spectrometry data via the regularized area under the ROC curve JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18076765&dopt=Abstract ER - TY - JOUR A1 - Mary K. Doherty A1 - Robert J. Beynon A1 - Phillip D. Whitfield T1 - Proteomics and naturally occurring animal diseases: Opportunities for animal and human medicine JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 135 EP - 141 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780085 ER - TY - JOUR T1 - New informatics customer initiative launched by ThermoFisher Scientific, Inc JO - Expert Review of Proteomics Y1 - 2007 SP - 701 EP - 703 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.701 ER - TY - JOUR A1 - McLerran D A1 - Grizzle WE A1 - Feng Z A1 - Thompson IM A1 - Bigbee WL A1 - Cazares LH A1 - Chan DW A1 - Dahlgren J A1 - Diaz J A1 - Kagan J A1 - Lin D A1 - Malik G A1 - Oelschlager D A1 - Partin A A1 - Randolph T A1 - Sokoll L A1 - Srivastava S A1 - Srivastava S A1 - Thornquist M A1 - Troyer D A1 - Wright GL A1 - Zhang Z A1 - Zhu L A1 - Semmes T1 - SELDI-TOF MS Whole Serum Proteomic Profiling with IMAC Surface Does Not Reliably Detect Prostate Cancer JO - Clin Chem Y1 - 2008 SP - 53 EP - 60 VL - 54 IS - 1 UR - http://dx.doi.org/10.1373/clinchem.2007.091496 ER - TY - JOUR A1 - Oliveira-Carvalho AL A1 - Guimarães PR A1 - Abreu PA A1 - Dutra DL A1 - Junqueira-de-Azevedo IL A1 - Rodrigues CR A1 - Ho PL A1 - Castro HC A1 - Zingali RB T1 - Identification and characterization of a new member of snake venom thrombin inhibitors from Bothrops insularis using a proteomic approach JO - Toxicon Y1 - 2007/12/14 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.toxicon.2007.11.026 ER - TY - JOUR A1 - Mathias Vandenbogaert A1 - Sébastien Li-Thiao-Té A1 - Hans-Michael Kaltenbach A1 - Runxuan Zhang A1 - Tero Aittokallio A1 - Benno Schwikowski T1 - Alignment of LC-MS images, with applications to biomarker discovery and protein identification JO - PROTEOMICS Y1 - 2008 SP - 650 EP - 672 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700791 ER - TY - JOUR A1 - Mark H. Chin A1 - Wei-Jun Qian A1 - Haixing Wang A1 - Vladislav A. Petyuk A1 - Joshua S. Bloom A1 - Daniel M. Sforza A1 - Goran Laćan A1 - Dahai Liu A1 - Arshad H. Khan A1 - Rita M. Cantor A1 - Diana J. Bigelow A1 - William P. Melega A1 - David G. Camp II A1 - Richard D. Smith A1 - Desmond J. Smith T1 - Mitochondrial Dysfunction, Oxidative Stress, and Apoptosis Revealed by Proteomic and Transcriptomic Analyses of the Striata in Two Mouse Models of Parkinson’s Disease JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 666 EP - 677 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070546l ER - TY - JOUR A1 - Mayte Coiras A1 - Emilio Camafeita A1 - María Rosa López-Huertas A1 - Enrique Calvo A1 - Juan Antonio López A1 - José Alcamí T1 - Application of proteomics technology for analyzing the interactions between host cells and intracellular infectious agents JO - PROTEOMICS Y1 - 2008 SP - 852 EP - 873 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700664 ER - TY - JOUR A1 - Komatsu A1 - Setsuko; Toorchi A1 - Mahmoud; Yukawa A1 - Kiyoshi T1 - Soybean Proteomics JO - Current Proteomics Y1 - 2007 SP - 182 EP - 186 VL - 4 IS - 3 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000003/art00007 ER - TY - JOUR A1 - Mansuy A1 - Isabelle M.; Tweedie-Cullen A1 - Ry Y.; Wollscheid A1 - Bernd; Livingstone-Zatchej A1 - Magdalena T1 - Neuroproteomics and the Detection of Regulatory Phosphosites JO - Current Proteomics Y1 - 2007 SP - 209 EP - 222 VL - 4 IS - 4 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000004/art00003 ER - TY - JOUR A1 - Maureen K. Bunger A1 - Benjamin J. Cargile A1 - Anne Ngunjiri A1 - Jonathan L. Bundy A1 - James L. Stephenson A1 - Jr T1 - Automated Proteomics of E. coli via Top-Down Electron-Transfer Dissociation Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 1459 EP - 1467 VL - 80 IS - 5 UR - http://dx.doi.org/10.1021/ac7018409 ER - TY - JOUR A1 - Berndt U A1 - Philipsen L A1 - Bartsch S A1 - Wiedenmann B A1 - Baumgart DC A1 - Hämmerle M A1 - Sturm A T1 - Systematic high-content proteomic analysis reveals substantial immunologic changes in colorectal cancer JO - Cancer Res Y1 - 2008 SP - 880 EP - 8 VL - 68 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18245490&dopt=Abstract ER - TY - JOUR A1 - Mistry J A1 - Finn R T1 - Pfam: a domain-centric method for analyzing proteins and proteomes JO - Methods Mol Biol Y1 - 2007 SP - 43 EP - 58 VL - 396 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18025685&dopt=Abstract ER - TY - JOUR A1 - Rui Cao A1 - QuanYuan He A1 - Jian Zhou A1 - QuanZe He A1 - Zhen Liu A1 - 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TY - JOUR A1 - Zhang A1 - Xiang; Oh A1 - Cheolhwan; Riley A1 - Catherine P.; Buck A1 - Charles T1 - Current Status of Computational Approaches for Protein Identification Using Tandem Mass Spectra JO - Current Proteomics Y1 - 2007 SP - 121 EP - 130 VL - 4 IS - 3 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000003/art00001 ER - TY - JOUR A1 - Zhen Y A1 - Qi JL A1 - Wang SS A1 - Su J A1 - Xu GH A1 - Zhang MS A1 - Miao L A1 - Peng XX A1 - Tian D A1 - Yang YH T1 - Comparative proteome analysis of differentially expressed proteins induced by Al toxicity in soybean JO - Physiol Plant Y1 - 2007 SP - 542 EP - 54 VL - 131 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18251846&dopt=Abstract ER - TY - JOUR A1 - Yin QY A1 - de Groot PW A1 - de Koster CG A1 - Klis FM T1 - Mass spectrometry-based proteomics of fungal wall glycoproteins JO - Trends Microbiol Y1 - 2008 SP - 20 EP - 6 VL - 16 IS - 1 UR - http://dx.doi.org/10.1016/j.tim.2007.10.011 ER - 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Fisher A1 - Markus Hardt T1 - A mass spectrometry-based strategy for detecting and characterizing endogenous proteinase activities in complex biological samples JO - PROTEOMICS Y1 - 2008 SP - 435 EP - 445 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700680 ER - TY - JOUR A1 - Jones J A1 - Otu HH A1 - Grall F A1 - Spentzos D A1 - Can H A1 - Aivado M A1 - Belldegrun AS A1 - Pantuck AJ A1 - Libermann TA T1 - Proteomic Identification of Interleukin-2 Therapy Response in Metastatic Renal Cell Cancer JO - J Urol Y1 - 2008 SP - 730 EP - 6 VL - 179 IS - 2 UR - http://dx.doi.org/10.1016/j.juro.2007.09.016 ER - TY - JOUR A1 - Maria Jansson A1 - Kristofer Wårell A1 - Fredrik Levander A1 - Peter James T1 - Membrane Protein Identification: N-Terminal Labeling of Nontryptic Membrane Protein Peptides Facilitates Database Searching JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 659 EP - 665 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070545t ER - TY - JOUR A1 - Jin Young Kim A1 - Ho-Jun Song A1 - Hoi-Jeong Lim A1 - Myung-Geun Shin A1 - Jae Seong Kim A1 - Hyeoung-Joon Kim A1 - Baik Yoon Kim A1 - Seung-won Lee T1 - Platelet Factor-4 Is an Indicator of Blood Count Recovery in Acute Myeloid Leukemia Patients in Complete Remission JO - Mol Cell Proteomics Y1 - 2008 SP - 431 EP - 441 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/431?etoc ER - TY - JOUR A1 - Jose L. Luque-Garcia A1 - Ge Zhou A1 - Daniel S. Spellman A1 - Tung-Tien Sun A1 - Thomas A. Neubert T1 - Analysis of Electroblotted Proteins by Mass Spectrometry: Protein Identification after Western Blotting JO - Mol Cell Proteomics Y1 - 2008 SP - 308 EP - 314 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/308?etoc ER - TY - JOUR A1 - Mones Abu-Asab A1 - Mohamed Chaouchi A1 - Hakima Amri T1 - Evolutionary medicine: A meaningful connection between omics, disease, and treatment JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 122 EP - 134 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780047 ER - TY - JOUR A1 - O'Connor R A1 - Clynes M A1 - Dowling P A1 - O'Donovan N A1 - O'Driscoll L T1 - Drug resistance in cancer - searching for mechanisms, markers and therapeutic agents JO - Expert Opin Drug Metab Toxicol Y1 - 2007 SP - 805 EP - 17 VL - 3 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18028026&dopt=Abstract ER - TY - JOUR A1 - Sosinska GJ A1 - de Groot PW A1 - Teixeira de Mattos MJ A1 - Dekker HL A1 - de Koster CG A1 - Hellingwerf KJ A1 - Klis FM T1 - Hypoxic conditions and iron restriction affect the cell-wall proteome of Candida albicans grown under vagina-simulative conditions JO - Microbiology Y1 - 2008 SP - 510 EP - 20 VL - 154 IS - Pt 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18227255&dopt=Abstract ER - TY - JOUR A1 - Bararia D A1 - Trivedi AK A1 - Zada AA A1 - Greif PA A1 - Mulaw MA A1 - Christopeit M A1 - Hiddemann W A1 - Bohlander SK A1 - Behre G T1 - Proteomic identification of the MYST domain histone acetyltransferase TIP60 (HTATIP) as a co-activator of the myeloid transcription factor C/EBPalpha JO - Leukemia Y1 - 2008/01/31 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/sj.leu.2405101 ER - TY - JOUR A1 - Martijn W. 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Adams A1 - Randy M. Whittal A1 - Himangshu S. Bose T1 - Identification of unknown protein complex members by radiolocalization and analysis of low-abundance complexes resolved using native polyacrylamide gel electrophoresis JO - ELECTROPHORESIS Y1 - 2008 SP - 753 EP - 760 VL - 29 IS - 4 UR - http://dx.doi.org/10.1002/elps.200700782 ER - TY - JOUR A1 - Charlotte Hagman A1 - Darrell Ricke A1 - Stefan Ewert A1 - Stephan Bek A1 - Rocco Falchetto A1 - Francis Bitsch T1 - Absolute Quantification of Monoclonal Antibodies in Biofluids by Liquid Chromatography-Tandem Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 1290 EP - 1296 VL - 80 IS - 4 UR - http://dx.doi.org/10.1021/ac702115b ER - TY - JOUR A1 - Qiuxia Dai A1 - G. Patricia Escobar A1 - Kevin W. Hakala A1 - Jessica M. Lambert A1 - Susan T. Weintraub A1 - Merry L. Lindsey T1 - The Left Ventricle Proteome Differentiates Middle-Aged and Old Left Ventricles in Mice JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 756 EP - 765 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700685e ER - TY - JOUR A1 - Lopez A1 - Jose L.; Bermudez-Crespo A1 - Jose T1 - Possibilities of Two-Dimensional Gel Electrophoresis in the Understanding of Human Disease JO - Current Proteomics Y1 - 2007 SP - 187 EP - 197 VL - 4 IS - 4 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000004/art00001 ER - TY - JOUR A1 - Kouhei Nagai A1 - Norishige Yotsukura A1 - Haruka Ikegami A1 - Hajime Kimura A1 - Koichi Morimoto T1 - Protein extraction for 2-DE from the lamina of Ecklonia kurome (laminariales): Recalcitrant tissue containing high levels of viscous polysaccharides JO - ELECTROPHORESIS Y1 - 2008 SP - 672 EP - 681 VL - 29 IS - 3 UR - http://dx.doi.org/10.1002/elps.200700461 ER - TY - JOUR A1 - Roux MM A1 - Radeke MJ A1 - Goel M A1 - Mushegian A A1 - Foltz KR T1 - 2DE identification of proteins exhibiting turnover and phosphorylation dynamics during sea urchin egg activation JO - Dev Biol Y1 - 2008 SP - 630 EP - 47 VL - 313 IS - 2 UR - http://dx.doi.org/10.1016/j.ydbio.2007.10.053 ER - TY - JOUR A1 - Alexander Scherl A1 - Scott A. 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Rossier A1 - Jean-Daniel Tissot A1 - Niels Lion T1 - Oxidation of proteins: Basic principles and perspectives for blood proteomics JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 142 EP - 157 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780009 ER - TY - JOUR A1 - Manfred Koegl and Peter Uetz T1 - Improving yeast two-hybrid screening systems JO - Brief Funct Genomic Proteomic Y1 - 2007 SP - 302 EP - 312 VL - 6 IS - 4 UR - http://bfgp.oxfordjournals.org/cgi/content/abstract/6/4/302?etoc ER - TY - JOUR A1 - Yoo JS A1 - Seong WK A1 - Kim TS A1 - Park YK A1 - Oh HB A1 - Yoo CK T1 - Comparative Proteome Analysis of the Outer Membrane Proteins of in Vitro-Induced Multi-Drug Resistant Neisseria gonorrhoeae JO - Microbiol Immunol Y1 - 2007 SP - 1171 EP - 7 VL - 51 IS - 12 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18094535&dopt=Abstract ER - TY - JOUR A1 - Magnus Palmblad A1 - Davinia J. Mills A1 - Laurence V. Bindschedler T1 - Heat-Shock Response in Arabidopsis thaliana Explored by Multiplexed Quantitative Proteomics Using Differential Metabolic Labeling JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 780 EP - 785 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr0705340 ER - TY - JOUR A1 - Hesse AM A1 - Marcelo P A1 - Rossier J A1 - Vinh J T1 - Simple and universal tool to remove on-line impurities in mono- or two-dimensional liquid chromatography-mass spectrometry analysis JO - J Chromatogr A Y1 - 2008/01/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.chroma.2007.12.060 ER - TY - JOUR A1 - Marc A. Reymond T1 - Proteomics of Human Bodyfluids: Principles, Methods, and Applications. By Visith Thongboonkerd (Ed.) 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Thompson A1 - Dorothea K. Thompson A1 - Robert L. Hettich T1 - Systematic Assessment of the Benefits and Caveats in Mining Microbial Post-Translational Modifications from Shotgun Proteomic Data: The Response of Shewanella oneidensis to Chromate Exposure JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 648 EP - 658 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070531n ER - TY - JOUR A1 - Roberto Scatena A1 - Patrizia Bottoni A1 - Bruno Giardina T1 - Modulation of cancer cell line differentiation: A neglected proteomic analysis with potential implications in pathophysiology, diagnosis, prognosis, and therapy of cancer JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 229 EP - 237 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780014 ER - TY - JOUR A1 - René P. 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Calvete T1 - Snake Venomics of Central American Pitvipers: Clues for Rationalizing the Distinct Envenomation Profiles of Atropoides nummifer and Atropoides picadoi JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 708 EP - 719 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700610z ER - TY - JOUR A1 - Thitiwan Srinark A1 - Chandra Kambhamettu T1 - An image analysis suite for spot detection and spot matching in two-dimensional electrophoresis gels JO - ELECTROPHORESIS Y1 - 2008 SP - 706 EP - 715 VL - 29 IS - 3 UR - http://dx.doi.org/10.1002/elps.200700244 ER - TY - JOUR A1 - Kah-Leong Lim T1 - Ubiquitin-proteasome system dysfunction in Parkinson's disease: current evidence and controversies JO - Expert Review of Proteomics Y1 - 2007 SP - 769 EP - 781 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.769 ER - TY - JOUR A1 - Stevens AL A1 - Wishnok JS A1 - Chai DH A1 - Grodzinsky AJ A1 - Tannenbaum SR T1 - A sodium dodecyl sulfate-polyacrylamide gel electrophoresis-liquid chromatography tandem mass spectrometry analysis of bovine cartilage tissue response to mechanical compression injury and the inflammatory cytokines tumor necrosis factor alpha and interle JO - Arthritis Rheum Y1 - 2008 SP - 489 EP - 500 VL - 58 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18240213&dopt=Abstract ER - TY - JOUR A1 - Shi M A1 - Jin J A1 - Wang Y A1 - Beyer RP A1 - Kitsou E A1 - Albin RL A1 - Gearing M A1 - Pan C A1 - Zhang J T1 - Mortalin: A Protein Associated With Progression of Parkinson Disease? 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Speicher T1 - Microscale solution IEF combined with 2-D DIGE substantially enhances analysis depth of complex proteomes such as mammalian cell and tissue extracts JO - ELECTROPHORESIS Y1 - 2008 SP - 695 EP - 705 VL - 29 IS - 3 UR - http://dx.doi.org/10.1002/elps.200700337 ER - TY - JOUR A1 - Aresta A A1 - Calvano CD A1 - Palmisano F A1 - Zambonin CG A1 - Monaco A A1 - Tommasi S A1 - Pilato B A1 - Paradiso A T1 - Impact of sample preparation in peptide/protein profiling in human serum by MALDI-TOF mass spectrometry JO - J Pharm Biomed Anal Y1 - 2008 SP - 157 EP - 64 VL - 46 IS - 1 UR - http://dx.doi.org/10.1016/j.jpba.2007.10.015 ER - TY - JOUR A1 - Tan F A1 - Zhang Y A1 - Wang J A1 - Wei J A1 - Cai Y A1 - Qian X T1 - An efficient method for dephosphorylation of phosphopeptides by cerium oxide JO - J Mass Spectrom Y1 - 2007/12/13 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/jms.1362 ER - TY - JOUR A1 - Thedieck K A1 - Polak P A1 - Kim ML A1 - Molle KD A1 - Cohen A A1 - Jenö P A1 - Arrieumerlou C A1 - Hall MN T1 - PRAS40 and PRR5-Like Protein Are New mTOR Interactors that Regulate Apoptosis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18030348&dopt=Abstract ER - TY - JOUR A1 - Zinkin NT A1 - Grall F A1 - Bhaskar K A1 - Otu HH A1 - Spentzos D A1 - Kalmowitz B A1 - Wells M A1 - Guerrero M A1 - Asara JM A1 - Libermann TA A1 - Afdhal NH T1 - Serum Proteomics and Biomarkers in Hepatocellular Carcinoma and Chronic Liver Disease JO - Clin Cancer Res Y1 - 2008 SP - 470 EP - 477 VL - 14 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18223221&dopt=Abstract ER - TY - JOUR A1 - Datta S T1 - Classification of breast cancer versus normal samples from mass spectrometry profiles using linear discriminant analysis of important features selected by random forest JO - Y1 - SP - EP - VL - IS - UR - http://www.bepress.com/sagmb/vol7/iss2/art7 ER - TY - JOUR A1 - Richard Wilson A1 - John F. Bateman T1 - Cartilage proteomics: Challenges, solutions and recent advances JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 251 EP - 263 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780007 ER - TY - JOUR A1 - Mastronunzio JE A1 - Tisa LS A1 - Normand P A1 - Benson DR T1 - Comparative secretome analysis suggests low plant cell wall degrading capacity in Frankia symbionts JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18226217&dopt=Abstract ER - TY - JOUR A1 - Casey J. Krusemark A1 - Jonathan T. Ferguson A1 - Craig D. Wenger A1 - Neil L. Kelleher A1 - Peter J. Belshaw T1 - Global Amine and Acid Functional Group Modification of Proteins JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 713 EP - 720 VL - 80 IS - 3 UR - http://dx.doi.org/10.1021/ac7019317 ER - TY - JOUR A1 - Hye Kyong Kweon and Kristina Håkansson T1 - Metal Oxide-Based Enrichment Combined with Gas-Phase Ion-Electron Reactions for Improved Mass Spectrometric Characterization of Protein Phosphorylation JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 749 EP - 755 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070386d ER - TY - JOUR A1 - Boris Macek A1 - Florian Gnad A1 - Boumediene Soufi A1 - Chanchal Kumar A1 - Jesper V.Olsen A1 - Ivan Mijakovic A1 - Matthias Mann T1 - Phosphoproteome Analysis of E. coli Reveals Evolutionary Conservation of Bacterial Ser/Thr/Tyr Phosphorylation JO - Mol Cell Proteomics Y1 - 2008 SP - 299 EP - 307 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/299?etoc ER - TY - JOUR A1 - Yie Hou Lee A1 - Urs A. Boelsterli A1 - Qingsong Lin A1 - Maxey C. M. Chung T1 - Proteomics profiling of hepatic mitochondria in heterozygous Sod2+/- mice, an animal model of discreet mitochondrial oxidative stress JO - PROTEOMICS Y1 - 2008 SP - 555 EP - 568 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700795 ER - TY - JOUR A1 - Santamaría E A1 - Muñoz J A1 - Fernández-Irigoyen J A1 - Sesma L A1 - Odriozola L A1 - Corrales FJ T1 - Proteomic analysis of liver diseases: molecular mechanisms and biomarker discovery JO - Mini Rev Med Chem Y1 - 2008 SP - 1 EP - 9 VL - 8 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18220980&dopt=Abstract ER - TY - JOUR A1 - Stephen Swatkoski A1 - Peter Gutierrez A1 - Colin Wynne A1 - Alexey Petrov A1 - Jonathan D. Dinman A1 - Nathan Edwards A1 - Catherine Fenselau T1 - Evaluation of Microwave-Accelerated Residue-Specific Acid Cleavage for Proteomic Applications JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 579 EP - 586 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070502c ER - TY - JOUR A1 - Meloni F A1 - Salvini R A1 - Bardoni AM A1 - Passadore I A1 - Solari N A1 - Vitulo P A1 - Oggionni T A1 - Viganò M A1 - Pozzi E A1 - Fietta AM T1 - Bronchoalveolar lavage fluid proteome in bronchiolitis obliterans syndrome: possible role for surfactant protein a in disease onset JO - J Heart Lung Transplant Y1 - 2007 SP - 1135 EP - 43 VL - 26 IS - 11 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18022079&dopt=Abstract ER - TY - JOUR A1 - Tian Z A1 - Greene AS A1 - Pietrusz JL A1 - Matus IR A1 - Liang M T1 - MicroRNA-target pairs in the rat kidney identified by microRNA microarray, proteomic, and bioinformatic analysis JO - Genome Res Y1 - 2008 SP - 404 EP - 11 VL - 18 IS - 3 UR - http://dx.doi.org/10.1101/gr.6587008 ER - TY - JOUR A1 - Bryan G. 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Norman T1 - Evolution of an Arsenal: Structural and Functional Diversification of the Venom System in the Advanced Snakes (Caenophidia) JO - Mol Cell Proteomics Y1 - 2008 SP - 215 EP - 246 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/215?etoc ER - TY - JOUR A1 - Xie X A1 - Li S A1 - Liu S A1 - Lu Y A1 - Shen P A1 - Ji J T1 - Proteomic analysis of mouse islets after multiple low-dose streptozotocin injection JO - Biochim Biophys Acta Y1 - 2008 SP - 276 EP - 84 VL - 1784 IS - 2 UR - http://dx.doi.org/10.1016/j.bbapap.2007.11.008 ER - TY - JOUR A1 - Mayr M A1 - Yusuf S A1 - Weir G A1 - Chung YL A1 - Mayr U A1 - Yin X A1 - Ladroue C A1 - Madhu B A1 - Roberts N A1 - De Souza A A1 - Fredericks S A1 - Stubbs M A1 - Griffiths JR A1 - Jahangiri M A1 - Xu Q A1 - Camm AJ T1 - Combined metabolomic and proteomic analysis of human atrial fibrillation JO - J Am Coll Cardiol Y1 - 2008 SP - 585 EP - 94 VL - 51 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18237690&dopt=Abstract ER - TY - JOUR A1 - Luchini A A1 - Geho DH A1 - Bishop B A1 - Tran D A1 - Xia C A1 - Dufour RL A1 - Jones CD A1 - Espina V A1 - Patanarut A A1 - Zhou W A1 - Ross MM A1 - Tessitore A A1 - Iii EF A1 - Liotta LA T1 - Smart Hydrogel Particles: Biomarker Harvesting: One-Step Affinity Purification, Size Exclusion, and Protection against Degradation JO - Nano Lett Y1 - 2008 SP - 350 EP - 61 VL - 8 IS - 1 UR - http://dx.doi.org/10.1021/nl072174l ER - TY - JOUR A1 - Dinesh D. Sriramulu T1 - Adaptive expression of foreign genes in the clonal variants of bacteria: From proteomics to clinical application JO - PROTEOMICS Y1 - 2008 SP - 882 EP - 892 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700811 ER - TY - JOUR A1 - Rawson PM A1 - Molette C A1 - Videtta M A1 - Altieri L A1 - Franceschini D A1 - Donato T A1 - Finocchi L A1 - Propato A A1 - Paroli M A1 - Meloni F A1 - Mastroianni CM A1 - d'Ettorre G A1 - Sidney J A1 - Sette A A1 - Barnaba V T1 - Cross-presentation of caspase-cleaved apoptotic self antigens in HIV infection JO - Nat Med Y1 - 2007 SP - 1431 EP - 9 VL - 13 IS - 12 UR - http://dx.doi.org/10.1038/nm1679 ER - TY - JOUR A1 - Lam T A1 - Nabi G T1 - Potential of urinary biomarkers in early bladder cancer diagnosis JO - Expert Rev Anticancer Ther Y1 - 2007 SP - 1105 EP - 1115 VL - 7 IS - 8 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18028019&dopt=Abstract ER - TY - JOUR A1 - Kurt Hojlund A1 - Zhengping Yi A1 - Hyonson Hwang A1 - Benjamin Bowen A1 - Natalie Lefort A1 - Charles R. Flynn A1 - Paul Langlais A1 - Susan T. Weintraub A1 - Lawrence J. Mandarino T1 - Characterization of the Human Skeletal Muscle Proteome by One-dimensional Gel Electrophoresis and HPLC-ESI-MS/MS JO - Mol Cell Proteomics Y1 - 2008 SP - 257 EP - 267 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/257?etoc ER - TY - JOUR A1 - Pia Schmidt A1 - Janet Walker A1 - Laura Selway A1 - David Stead A1 - Zhikang Yin A1 - Brice Enjalbert A1 - Michael Weig A1 - Alistair J. P. Brown T1 - Proteomic analysis of the pH response in the fungal pathogen Candida glabrata JO - PROTEOMICS Y1 - 2008 SP - 534 EP - 544 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700845 ER - TY - JOUR A1 - Giovanni Candiano A1 - Laura Santucci A1 - Andrea Petretto A1 - Barbara Pavone A1 - Piero Del Boccio A1 - Luca Musante A1 - Maurizio Bruschi A1 - Giorgio Federici A1 - Rosanna Gusmano A1 - Andrea Urbani A1 - Gian M. Ghiggeri T1 - High-resolution 2-DE for resolving proteins, protein adducts and complexes in plasma JO - ELECTROPHORESIS Y1 - 2008 SP - 682 EP - 694 VL - 29 IS - 3 UR - http://dx.doi.org/10.1002/elps.200700537 ER - TY - JOUR A1 - Xiaogang Jiang A1 - Mingliang Ye A1 - Hanfa Zou T1 - Technologies and methods for sample pretreatment in efficient proteome and peptidome analysis JO - PROTEOMICS Y1 - 2008 SP - 686 EP - 705 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700617 ER - TY - JOUR A1 - Zhou HY T1 - Proteomic analysis of hydroxyapatite interaction proteins in bone JO - Ann N Y Acad Sci Y1 - 2007 SP - 323 EP - 6 VL - 1116 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18083934&dopt=Abstract ER - TY - JOUR A1 - Caldwell RL A1 - Opalenik SR A1 - Davidson JM A1 - Caprioli RM A1 - Nanney LB T1 - Tissue profiling MALDI mass spectrometry reveals prominent calcium-binding proteins in the proteome of regenerative MRL mouse wounds JO - Wound Repair Regen Y1 - 2007/12/13 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1524-475X.2007.00324.x ER - TY - JOUR A1 - Vardabasso C A1 - Manganaro L A1 - Lusic M A1 - Marcello A A1 - Giacca M T1 - The histone chaperone protein Nucleosome Assembly Protein-1 (hNAP-1) binds HIV-1 Tat and promotes viral transcription JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18226242&dopt=Abstract ER - TY - JOUR A1 - Jun-ichi Furukawa A1 - Yasuro Shinohara A1 - Hiromitsu Kuramoto A1 - Yoshiaki Miura A1 - Hideyuki Shimaoka A1 - Masaki Kurogochi A1 - Mika Nakano A1 - Shin-Ichiro Nishimura T1 - Comprehensive Approach to Structural and Functional Glycomics Based on Chemoselective Glycoblotting and Sequential Tag Conversion JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 1094 EP - 1101 VL - 80 IS - 4 UR - http://dx.doi.org/10.1021/ac702124d ER - TY - JOUR A1 - de la Cadena A1 - Maria P.; Rodriguez-Pineiro A1 - Ana M.; Alvarez-Chaver A1 - Paula; Martinez-Zorzano A1 - Vicenta S.; Rodriguez-Berrocal A1 - Francisco J T1 - Relevance of Protein Isoforms in Proteomic Studies JO - Current Proteomics Y1 - 2007 SP - 235 EP - 252 VL - 4 IS - 4 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000004/art00005 ER - TY - JOUR A1 - Jon M. Jacobs A1 - Katrina M. Waters A1 - Loel E. Kathmann A1 - David G. Camp A1 - II A1 - H. Steven Wiley A1 - Richard D. Smith A1 - Brian D. Thrall T1 - The Mammary Epithelial Cell Secretome and Its Regulation by Signal Transduction Pathways JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 558 EP - 569 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr0704377 ER - TY - JOUR A1 - Harold Tjalsma A1 - Renée M. J. Schaeps A1 - Dorine W. Swinkels T1 - Immunoproteomics: From biomarker discovery to diagnostic applications JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 167 EP - 180 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780012 ER - TY - JOUR A1 - Buza TJ A1 - McCarthy FM A1 - Burgess SC T1 - Experimental-confirmation and functional-annotation of predicted proteins in the chicken genome JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18021451&dopt=Abstract ER - TY - JOUR A1 - Higdon R A1 - Hogan JM A1 - Kolker N A1 - van Belle G A1 - Kolker E T1 - Experiment-specific estimation of Peptide identification probabilities using a randomized database JO - OMICS Y1 - 2007 SP - 351 EP - 66 VL - 11 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18092908&dopt=Abstract ER - TY - JOUR A1 - Marengo E A1 - Robotti E A1 - Bobba M A1 - Milli A A1 - Campostrini N A1 - Righetti SC A1 - Cecconi D A1 - Righetti PG T1 - Application of partial least squares discriminant analysis and variable selection procedures: a 2D-PAGE proteomic study JO - Anal Bioanal Chem Y1 - 2008/01/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18224487&dopt=Abstract ER - TY - JOUR A1 - Brumbarova T A1 - Matros A A1 - Mock HP A1 - Bauer P T1 - A proteomic study shows differential regulation of stress, redox regulation and peroxidase proteins by iron supply and the transcription factor FER JO - Plant J Y1 - 2008/01/23 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1365-313X.2008.03421.x ER - TY - JOUR A1 - Dhaval Nanavati A1 - Marjan Gucek A1 - Jacqueline L. S. Milne A1 - Sriram Subramaniam A1 - Sanford P. Markey T1 - Stoichiometry and Absolute Quantification of Proteins with Mass Spectrometry Using Fluorescent and Isotope-labeled Concatenated Peptide Standards JO - Mol Cell Proteomics Y1 - 2008 SP - 442 EP - 447 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/442?etoc ER - TY - JOUR A1 - Humberto González-Díaz A1 - Yenny González-Díaz A1 - Lourdes Santana A1 - Florencio M. Ubeira A1 - Eugenio Uriarte T1 - Proteomics, networks and connectivity indices JO - PROTEOMICS Y1 - 2008 SP - 750 EP - 778 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700638 ER - TY - JOUR A1 - Kosaku Shinoda A1 - Masahiro Sugimoto A1 - Masaru Tomita A1 - Yasushi Ishihama T1 - Informatics for peptide retention properties in proteomic LC-MS JO - PROTEOMICS Y1 - 2008 SP - 787 EP - 798 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700692 ER - TY - JOUR A1 - Katie Wing-kei Lam A1 - Samuel Chun-lap Lo T1 - Discovery of diagnostic serum biomarkers of gastric cancer using proteomics JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 219 EP - 228 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780015 ER - TY - JOUR A1 - Ido Ginodi A1 - Tal Vider-Shalit A1 - Lea Tsaban A1 - Yoram Louzoun T1 - Precise score for the prediction of peptides cleaved by the proteasome JO - Bioinformatics Y1 - 2008 SP - 477 EP - 483 VL - 24 IS - 4 UR - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/24/4/477?etoc ER - TY - JOUR A1 - Sen-Yung Hsieh A1 - Chiao-Li Tseng A1 - Yun-Shien Lee A1 - An-Jing Kuo A1 - Chien-FengSun A1 - Yen-Hsiu Lin A1 - Jen-Kun Chen T1 - Highly Efficient Classification and Identification of Human Pathogenic Bacteria by MALDI-TOF MS JO - Mol Cell Proteomics Y1 - 2008 SP - 448 EP - 456 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/448?etoc ER - TY - JOUR A1 - Vila A A1 - Tallman KA A1 - Jacobs AT A1 - Liebler DC A1 - Porter NA A1 - Marnett LJ T1 - Identification of Protein Targets of 4-Hydroxynonenal Using Click Chemistry for ex Vivo Biotinylation of Azido and Alkynyl Derivatives JO - Chem Res Toxicol Y1 - 2008 SP - 432 EP - 44 VL - 21 IS - 2 UR - http://dx.doi.org/10.1021/tx700347w ER - TY - JOUR A1 - Goel A1 - Arvind; Rakwal A1 - Randeep; Agrawal A1 - Ganesh K T1 - Human Heart Failure: A Proteomics Perspective JO - Current Proteomics Y1 - 2007 SP - 174 EP - 181 VL - 4 IS - 3 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000003/art00006 ER - TY - JOUR A1 - Kimura A A1 - Sakurai T A1 - Tanaka Y A1 - Hozumi I A1 - Takahashi K A1 - Takemura M A1 - Saito K A1 - Seishima M A1 - Inuzuka T T1 - Proteomic analysis of autoantibodies in neuropsychiatric systemic lupus erythematosus patient with white matter hyperintensities on brain MRI JO - Lupus Y1 - 2008 SP - 16 EP - 20 VL - 17 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18089678&dopt=Abstract ER - TY - JOUR A1 - Babu A. Manjasetty A1 - Andrew P. Turnbull A1 - Santosh Panjikar A1 - Konrad Büssow A1 - Mark R. Chance T1 - Automated technologies and novel techniques to accelerate protein crystallography for structural genomics JO - PROTEOMICS Y1 - 2008 SP - 612 EP - 625 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700687 ER - TY - JOUR A1 - Mulder NJ A1 - Kersey P A1 - Pruess M A1 - Apweiler R T1 - In Silico Characterization of Proteins: UniProt, InterPro and Integr8 JO - Mol Biotechnol Y1 - 2008 SP - 165 EP - 77 VL - 38 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18219596&dopt=Abstract ER - TY - JOUR A1 - Barboro P A1 - Rubagotti A A1 - Orecchia P A1 - Spina B A1 - Truini M A1 - Repaci E A1 - Carmignani G A1 - Romagnoli A A1 - Introini C A1 - Boccardo F A1 - Carnemolla B A1 - Balbi C T1 - Differential proteomic analysis of nuclear matrix in muscle-invasive bladder cancer: Potential to improve diagnosis and prognosis JO - Cell Oncol Y1 - 2008 SP - 13 EP - 26 VL - 30 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18219107&dopt=Abstract ER - TY - JOUR A1 - Sebastian Bocker A1 - Zsuzsanna Liptak A1 - Marcel Martin A1 - Anton Pervukhin A1 - Henner Sudek T1 - DECOMP--from interpreting Mass Spectrometry peaks to solving the Money Changing Problem JO - Bioinformatics Y1 - 2008 SP - 591 EP - 593 VL - 24 IS - 4 UR - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/24/4/591?etoc ER - TY - JOUR A1 - Steven W. Taylor A1 - Chengzao Sun A1 - Amy Hsieh A1 - Nancy L. Andon A1 - Soumitra S. Ghosh T1 - A Sulfated, Phosphorylated 7 kDa Secreted Peptide Characterized by Direct Analysis of Cell Culture Media JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 795 EP - 802 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr7006686 ER - TY - JOUR A1 - Appella E A1 - Anderson CW T1 - New prospects for proteomics - electron-capture (ECD) and electron-transfer dissociation (ETD) fragmentation techniques and combined fractional diagonal chromatography (COFRADIC) JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1742-4658.2007.06146.x ER - TY - JOUR A1 - Chi-Hung Lin A1 - Chia-Wei Lin A1 - Kay-Hooi Khoo T1 - Proteomic identification of specific glycosyltransferases functionally implicated for the biosynthesis of a targeted glyco-epitope JO - PROTEOMICS Y1 - 2008 SP - 475 EP - 483 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700710 ER - TY - JOUR A1 - Md. Atiar Rahman A1 - Suresh G. Kumar A1 - Sang Woo Kim A1 - Hye Jin Hwang A1 - Yu Mi Baek A1 - Sung Hak Lee A1 - Hee Sun Hwang A1 - Yun Hee Shon A1 - Kyung Soo Nam A1 - Jong Won Yun T1 - Proteomic analysis for inhibitory effect of chitosan oligosaccharides on 3T3-L1 adipocyte differentiation JO - PROTEOMICS Y1 - 2008 SP - 569 EP - 581 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700888 ER - TY - JOUR A1 - Au JS A1 - Cho WC A1 - Yip TT A1 - Law SC T1 - Proteomic approach to biomarker discovery in cancer tissue from lung adenocarcinoma among nonsmoking Chinese women in Hong Kong JO - Cancer Invest Y1 - 2008 SP - 128 EP - 35 VL - 26 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18259942&dopt=Abstract ER - TY - JOUR A1 - Shadidi M A1 - Sørensen D A1 - Dybwad A A1 - Furset G A1 - Sioud M T1 - Mucosal vaccination with phage-displayed tumour antigens identified through proteomics-based strategy inhibits the growth and metastasis of 4T1 breast adenocarcinoma JO - Int J Oncol Y1 - 2008 SP - 241 EP - 7 VL - 32 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18097564&dopt=Abstract ER - TY - JOUR A1 - Gong W A1 - Zhou D A1 - Ren Y A1 - Wang Y A1 - Zuo Z A1 - Shen Y A1 - Xiao F A1 - Zhu Q A1 - Hong A A1 - Zhou X A1 - Gao X A1 - Li T T1 - PepCyber:P~PEP: a database of human protein protein interactions mediated by phosphoprotein-binding domains JO - Nucl Acids Res Y1 - 2008 SP - D679 EP - 83 VL - 36 IS - Database issue UR - http://dx.doi.org/10.1093/nar/gkm854 ER - TY - JOUR A1 - Ahsan N A1 - Lee DG A1 - Lee SH A1 - Kang KY A1 - Bahk JD A1 - Choi MS A1 - Lee IJ A1 - Renaut J A1 - Lee BH T1 - A comparative proteomic analysis of tomato leaves in response to waterlogging stress JO - Physiol Plant Y1 - 2007 SP - 555 EP - 70 VL - 131 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18251847&dopt=Abstract ER - TY - JOUR A1 - Takeshi Masuda A1 - Masaru Tomita A1 - Yasushi Ishihama T1 - Phase Transfer Surfactant-Aided Trypsin Digestion for Membrane Proteome Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 731 EP - 740 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700658q ER - TY - JOUR A1 - Ferranti P A1 - Mamone G A1 - Picariello G A1 - Addeo F T1 - Mass spectrometry analysis of gliadins in celiac disease JO - J Mass Spectrom Y1 - 2007 SP - 1531 EP - 1548 VL - 42 IS - 12 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18085572&dopt=Abstract ER - TY - JOUR A1 - Takashi Nakazawa A1 - Minoru Yamaguchi A1 - Taka-aki Okamura A1 - Eiji Ando A1 - Osamu Nishimura A1 - Susumu Tsunasawa T1 - Terminal proteomics: N- and C-terminal analyses for high-fidelity identification of proteins using MS JO - PROTEOMICS Y1 - 2008 SP - 673 EP - 685 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700084 ER - TY - JOUR A1 - Trong Khoa Pham A1 - Phillip C Wright T1 - Proteomic analysis of Saccharomyces cerevisiae JO - Expert Review of Proteomics Y1 - 2007 SP - 793 EP - 813 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.793 ER - TY - JOUR A1 - Sheehan D T1 - The potential of proteomics for providing new insights into environmental impacts on human health JO - Rev Environ Health Y1 - 2007 SP - 175 EP - 94 VL - 22 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18078003&dopt=Abstract ER - TY - JOUR A1 - Delphine Pflieger A1 - Martin A. Junger A1 - Markus Muller A1 - Oliver Rinner A1 - Hookeun Lee A1 - Peter M. Gehrig A1 - Matthias Gstaiger A1 - Ruedi Aebersold T1 - Quantitative Proteomic Analysis of Protein Complexes: Concurrent Identification of Interactors and Their State of Phosphorylation JO - Mol Cell Proteomics Y1 - 2008 SP - 326 EP - 346 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/326?etoc ER - TY - JOUR A1 - P. Escoubas A1 - L. Quinton A1 - G. M. Nicholson T1 - Venomics: unravelling the complexity of animal venoms with mass spectrometry JO - Journal of Mass Spectrometry Y1 - 2008 SP - 279 EP - 295 VL - 43 IS - 3 UR - http://dx.doi.org/10.1002/jms.1389 ER - TY - JOUR A1 - Yoshiaki Miura A1 - Megumi Hato A1 - Yasuro Shinohara A1 - Hiromitsu Kuramoto A1 - Jun-ichi Furukawa A1 - Masaki Kurogochi A1 - Hideyuki Shimaoka A1 - Mitsuhiro Tada A1 - Kazuaki Nakanishi A1 - Michitaka Ozaki A1 - Satoru Todo A1 - Shin-Ichiro Nishimura T1 - BlotGlycoABCTM, an Integrated Glycoblotting Technique for Rapid and Large Scale Clinical Glycomics JO - Mol Cell Proteomics Y1 - 2008 SP - 370 EP - 377 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/370?etoc ER - TY - JOUR A1 - Nilsen J A1 - Irwin RW A1 - Gallaher TK A1 - Brinton RD T1 - Estradiol in vivo regulation of brain mitochondrial proteome JO - J Neurosci Y1 - 2007 SP - 14069 EP - 77 VL - 27 IS - 51 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18094246&dopt=Abstract ER - TY - JOUR A1 - Habtom W. Ressom A1 - Rency S. Varghese A1 - Lenka Goldman A1 - Yanming An A1 - Christopher A. Loffredo A1 - Mohamed Abdel-Hamid A1 - Zuzana Kyselova A1 - Yehia Mechref A1 - Milos Novotny A1 - Steven K Drake A1 - Radoslav Goldman T1 - Analysis of MALDI-TOF Mass Spectrometry Data for Discovery of Peptide and Glycan Biomarkers of Hepatocellular Carcinoma JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 603 EP - 610 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr0705237 ER - TY - JOUR A1 - Kabbani N A1 - Woll MP A1 - Levenson R A1 - Lindstrom JM A1 - Changeux JP T1 - Intracellular complexes of the 2 subunit of the nicotinic acetylcholine receptor in brain identified by proteomics JO - Proc Natl Acad Sci U S A Y1 - 2007 SP - 20570 EP - 5 VL - 104 IS - 51 UR - http://dx.doi.org/10.1073/pnas.0710314104 ER - TY - JOUR A1 - Franck Brouillard A1 - Janine Fritsch A1 - Aleksander Edelman A1 - Mario Ollero T1 - Contribution of proteomics to the study of the role of cytokeratins in disease and physiopathology JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 264 EP - 285 VL - 2 IS - 2 UR - http://dx.doi.org/10.1002/prca.200780018 ER - TY - JOUR A1 - Jackson D A1 - Craven RA A1 - Hutson RC A1 - Graze I A1 - Lueth P A1 - Tonge RP A1 - Hartley JL A1 - Nickson JA A1 - Rayner SJ A1 - Johnston C A1 - Dieplinger B A1 - Hubalek M A1 - Wilkinson N A1 - Perren TJ A1 - Kehoe S A1 - Hall GD A1 - Daxenbichler G A1 - Dieplinger H A1 - Selby PJ A1 - Banks RE T1 - Proteomic profiling identifies afamin as a potential biomarker for ovarian cancer JO - Clin Cancer Res Y1 - 2007 SP - 7370 EP - 9 VL - 13 IS - 24 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18094419&dopt=Abstract ER - TY - JOUR A1 - Matsumoto N A1 - Ezaki J A1 - Komatsu M A1 - Takahashi K A1 - Mineki R A1 - Taka H A1 - Kikkawa M A1 - Fujimura T A1 - Takeda-Ezaki M A1 - Ueno T A1 - Tanaka K A1 - Kominami E T1 - Comprehensive proteomics analysis of autophagy-deficient mouse liver JO - Biochem Biophys Res Commun Y1 - 2008 SP - 643 EP - 9 VL - 368 IS - 3 UR - http://dx.doi.org/10.1016/j.bbrc.2008.01.112 ER - TY - JOUR A1 - Quentin Kaas A1 - Jan-C. Westermann A1 - Reena Halai A1 - Conan K. L. Wang A1 - David J. Craik T1 - ConoServer, a database for conopeptide sequences and structures JO - Bioinformatics Y1 - 2008 SP - 445 EP - 446 VL - 24 IS - 3 UR - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/24/3/445?etoc ER - TY - JOUR A1 - Shuichi Shimma A1 - Yuki Sugiura A1 - Takahiro Hayasaka A1 - Nobuhiro Zaima A1 - Mineo Matsumoto A1 - Mitsutoshi Setou T1 - Mass Imaging and Identification of Biomolecules with MALDI-QIT-TOF-Based System JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 878 EP - 885 VL - 80 IS - 3 UR - http://dx.doi.org/10.1021/ac071301v ER - TY - JOUR A1 - Julian Vasilescu A1 - Jeffrey C. Smith A1 - Daniel R. Zweitzig A1 - Nicholas J. Denis A1 - Dale S. Haines A1 - Daniel Figeys T1 - Systematic determination of ion score cutoffs based on calculated false positive rates: application for identifying ubiquitinated proteins by tandem mass spectrometry JO - Journal of Mass Spectrometry Y1 - 2008 SP - 296 EP - 304 VL - 43 IS - 3 UR - http://dx.doi.org/10.1002/jms.1297 ER - TY - JOUR A1 - Satoshi Nishizuka A1 - Sundhar Ramalingam A1 - Brett Spurrier A1 - Frank L. Washburn A1 - Ramya Krishna A1 - Peter Honkanen A1 - Lynn Young A1 - Tsutomu Shimura A1 - Patricia S. Steeg A1 - John Austin T1 - Quantitative Protein Network Monitoring in Response to DNA Damage JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 803 EP - 808 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr0702971 ER - TY - JOUR A1 - Xiu-Wu Bian A1 - Jian-Ping Xu A1 - Yi-Fang Ping A1 - Yan Wang A1 - Jian-Hong Chen A1 - Cheng-Ping Xu A1 - Yu-Zhang Wu A1 - Jun Wu A1 - Xiang-Dong Zhou A1 - Yi-Sheng Chen A1 - Jing-Quan Shi A1 - Ji Ming Wang T1 - Unique proteomic features induced by a potential antiglioma agent, Nordy (dl-nordihydroguaiaretic acid), in glioma cells JO - PROTEOMICS Y1 - 2008 SP - 484 EP - 494 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700054 ER - TY - JOUR A1 - Bonney GK A1 - Craven RA A1 - Prasad R A1 - Melcher AF A1 - Selby PJ A1 - Banks RE T1 - Circulating markers of biliary malignancy: opportunities in proteomics? JO - Lancet Oncol Y1 - 2008 SP - 149 EP - 58 VL - 9 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18237849&dopt=Abstract ER - TY - JOUR A1 - Espina V A1 - Wulfkuhle JD A1 - Calvert VS A1 - Petricoin EF 3rd A1 - Liotta LA T1 - Reverse phase protein microarrays for monitoring biological responses JO - Methods Mol Biol Y1 - 2007 SP - 321 EP - 36 VL - 383 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18217695&dopt=Abstract ER - TY - JOUR A1 - Papale M A1 - Pedicillo MC A1 - Di Paolo S A1 - Thatcher BJ A1 - Lo Muzio L A1 - Bufo P A1 - Rocchetti MT A1 - Centra M A1 - Ranieri E A1 - Gesualdo L T1 - Saliva analysis by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF/MS): from sample collection to data analysis JO - Clin Chem Lab Med Y1 - 2008 SP - 89 EP - 99 VL - 46 IS - 1 UR - http://dx.doi.org/10.1515/CCLM.2008.013 ER - TY - JOUR A1 - Salisbury CM A1 - Cravatt BF T1 - Optimization of Activity-Based Probes for Proteomic Profiling of Histone Deacetylase Complexes JO - J Am Chem Soc Y1 - 2008 SP - 2184 EP - 94 VL - 130 IS - 7 UR - http://dx.doi.org/10.1021/ja074138u ER - TY - JOUR A1 - Saito K A1 - Enya K A1 - Oneyama C A1 - Hikita T A1 - Okada M T1 - Proteomic identification of ZO-1/2 as a novel scaffold for Src/Csk regulatory circuit JO - Biochem Biophys Res Commun Y1 - 2008 SP - 969 EP - 75 VL - 366 IS - 4 UR - http://dx.doi.org/10.1016/j.bbrc.2007.12.055 ER - TY - JOUR A1 - Galka F A1 - Wai SN A1 - Kusch H A1 - Engelmann S A1 - Hecker M A1 - Schmeck B A1 - Hippenstiel S A1 - Uhlin BE A1 - Steinert M T1 - Proteomic characterisation of the whole secretome of Legionella pneumophila and functional analysis of outer membrane vesicles JO - Infect Immun Y1 - 2008/02/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1128/IAI.01396-07 ER - TY - JOUR A1 - Heidema AG A1 - Nagelkerke N T1 - Developing a discrimination rule between breast cancer patients and controls using proteomics mass spectrometric data: a three-step approach JO - Y1 - SP - EP - VL - IS - UR - http://www.bepress.com/sagmb/vol7/iss2/art4 ER - TY - JOUR A1 - Enrico Pieroni A1 - Sergio de la Fuente van Bentem A1 - Gianmaria Mancosu A1 - Enrico Capobianco A1 - Heribert Hirt A1 - Alberto de la Fuente T1 - Protein networking: insights into global functional organization of proteomes JO - PROTEOMICS Y1 - 2008 SP - 799 EP - 816 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700767 ER - TY - JOUR A1 - Tryggvason S A1 - Nukui M A1 - Oddsson A A1 - Tryggvason K A1 - Jörnvall H T1 - Glomerulus proteome analysis with two-dimensional gel electrophoresis and mass spectrometry JO - Cell Mol Life Sci Y1 - 2007 SP - 3317 EP - 35 VL - 64 IS - 24 UR - http://dx.doi.org/10.1007/s00018-007-7463-6 ER - TY - JOUR A1 - Mayer U A1 - Ungerer N A1 - Klimmeck D A1 - Warnken U A1 - Schnölzer M A1 - Frings S A1 - Möhrlen F T1 - Proteomic Analysis of a Membrane Preparation from Rat Olfactory Sensory Cilia JO - Chem Senses Y1 - 2008 SP - 145 EP - 62 VL - 33 IS - 2 UR - http://dx.doi.org/10.1093/chemse/bjm073 ER - TY - JOUR A1 - Sinha TK A1 - Khatib-Shahidi S A1 - Yankeelov TE A1 - Mapara K A1 - Ehtesham M A1 - Cornett DS A1 - Dawant BM A1 - Caprioli RM A1 - Gore JC T1 - Integrating spatially resolved three-dimensional MALDI IMS with in vivo magnetic resonance imaging JO - Nat Methods Y1 - 2008 SP - 57 EP - 9 VL - 5 IS - 1 UR - http://dx.doi.org/10.1038/nmeth1147 ER - TY - JOUR A1 - Pisitkun T A1 - Hoffert JD A1 - Yu MJ A1 - Knepper MA T1 - Tandem mass spectrometry in physiology JO - Physiology (Bethesda) Y1 - 2007 SP - 390 EP - 400 VL - 22 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18073412&dopt=Abstract ER - TY - JOUR A1 - Su C A1 - Peregrin-Alvarez JM A1 - Butland G A1 - Phanse S A1 - Fong V A1 - Emili A A1 - Parkinson J T1 - Bacteriome.org--an integrated protein interaction database for E. coli JO - Nucl Acids Res Y1 - 2008 SP - D632 EP - 6 VL - 36 IS - Database issue UR - http://dx.doi.org/10.1093/nar/gkm807 ER - TY - JOUR A1 - Gerassimos Bastas A1 - Seshi R. Sompuram A1 - Brian Pierce A1 - Kodela Vani A1 - Steven A. Bogen T1 - Bioinformatic Requirements for Protein Database Searching Using Predicted Epitopes from Disease-associated Antibodies JO - Mol Cell Proteomics Y1 - 2008 SP - 247 EP - 256 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/247?etoc ER - TY - JOUR A1 - Wang Y A1 - Li DA A1 - He Y A1 - Wang F A1 - Guo YJ A1 - Yang F A1 - Zhou Q A1 - Sun SH T1 - Proteomic analysis of augmented immune responses in mouse by prime-and-boost immunization strategy with DNA vaccine coding HBsAg and rHBsAg protein JO - Vaccine Y1 - 2007 SP - 8146 EP - 53 VL - 25 IS - 48 UR - http://dx.doi.org/10.1016/j.vaccine.2007.09.037 ER - TY - JOUR A1 - Qiu J A1 - Gao HQ A1 - Li BY A1 - Shen L T1 - Proteomics investigation of protein expression changes in ouabain induced apoptosis in human umbilical vein endothelial cells JO - J Cell Biochem Y1 - 2008/02/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/jcb.21691 ER - TY - JOUR A1 - Yang YX A1 - Chen ZC A1 - Zhang GY A1 - Yi H A1 - Xiao ZQ T1 - A subcelluar proteomic investigation into vincristine-resistant gastric cancer cell line JO - J Cell Biochem Y1 - 2008/02/5 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/jcb.21687 ER - TY - JOUR A1 - Lukas U. Zimmerli A1 - Eric Schiffer A1 - Petra Zurbig A1 - David M. Good A1 - Markus Kellmann A1 - Laetitia Mouls A1 - Andrew R. Pitt A1 - Joshua J. Coon A1 - Roland E. Schmieder A1 - Karlheinz H. Peter A1 - Harald Mischak A1 - Walter Kolch A1 - Christian Delles A1 - Anna F. Dominiczak T1 - Urinary Proteomic Biomarkers in Coronary Artery Disease JO - Mol Cell Proteomics Y1 - 2008 SP - 290 EP - 298 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/290?etoc ER - TY - JOUR A1 - Giusti L A1 - Iacconi P A1 - Ciregia F A1 - Giannaccini G A1 - Basolo F A1 - Donatini G A1 - Miccoli P A1 - Lucacchini A T1 - Proteomic analysis of human thyroid fine needle aspiration fluid JO - J Endocrinol Invest Y1 - 2007 SP - 865 EP - 9 VL - 30 IS - 10 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18075290&dopt=Abstract ER - TY - JOUR A1 - Liu X A1 - Yang WC A1 - Gao Q A1 - Regnier F T1 - Toward chromatographic analysis of interacting protein networks JO - J Chromatogr A Y1 - 2008 SP - 24 EP - 32 VL - 1178 IS - 1-2 UR - http://dx.doi.org/10.1016/j.chroma.2007.10.067 ER - TY - JOUR A1 - Schwertassek U A1 - Weingarten L A1 - Dick TP T1 - Identification of redox-active cell-surface proteins by mechanism-based kinetic trapping JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18089859&dopt=Abstract ER - TY - JOUR A1 - Bing Zhao A1 - Chit Laa Poh T1 - Insights into environmental bioremediation by microorganisms through functional genomics and proteomics JO - PROTEOMICS Y1 - 2008 SP - 874 EP - 881 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200701005 ER - TY - JOUR A1 - Segura MM A1 - Garnier A A1 - Di Falco MR A1 - Whissell G A1 - Meneses-Acosta A A1 - Arcand N A1 - Kamen A T1 - Identification of host proteins associated to retroviral vector particles by proteomic analysis of highly purified vector preparations JO - J Virol Y1 - 2008 SP - 1107 EP - 17 VL - 82 IS - 3 UR - http://dx.doi.org/10.1128/JVI.01909-07 ER - TY - JOUR A1 - Cravatt BF A1 - Simon GM A1 - Yates JR 3rd T1 - The biological impact of mass-spectrometry-based proteomics JO - Nature Y1 - 2007 SP - 991 EP - 1000 VL - 450 IS - 7172 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18075578&dopt=Abstract ER - TY - JOUR A1 - Jong-Seo Kim A1 - Ji-Hyun Kim A1 - Hie-Joon Kim T1 - Matrix-assisted laser desorption/ionization signal enhancement of peptides by picolinamidination of amino groups JO - Rapid Communications in Mass Spectrometry Y1 - 2008 SP - 495 EP - 502 VL - 22 IS - 4 UR - http://dx.doi.org/10.1002/rcm.3392 ER - TY - JOUR A1 - Dobrin Nedelkov T1 - Population proteomics: Investigation of protein diversity in human populations JO - PROTEOMICS Y1 - 2008 SP - 779 EP - 786 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700501 ER - TY - JOUR A1 - Gregory L. Finney A1 - Adele R. Blackler A1 - Michael R. Hoopmann A1 - Jesse D. Canterbury A1 - Christine C. Wu A1 - Michael J. MacCoss T1 - Label-Free Comparative Analysis of Proteomics Mixtures Using Chromatographic Alignment of High-Resolution LC-MS Data JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 961 EP - 971 VL - 80 IS - 4 UR - http://dx.doi.org/10.1021/ac701649e ER - TY - JOUR A1 - Shi F A1 - Takasaki H A1 - Komatsu S T1 - Quantitative analysis of auxin-regulated proteins from basal part of leaf sheaths in rice by two-dimensional difference gel electrophoresis JO - Phytochemistry Y1 - 2008 SP - 637 EP - 46 VL - 69 IS - 3 UR - http://dx.doi.org/10.1016/j.phytochem.2007.08.035 ER - TY - JOUR A1 - Chan A1 - Man K.; Bahn A1 - Sabine T1 - Quantitative Proteomic Approaches to Investigate the Membrane Proteome in Neuropsychiatric Disorders JO - Current Proteomics Y1 - 2007 SP - 131 EP - 140 VL - 4 IS - 3 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000003/art00002 ER - TY - JOUR A1 - Xumin Zhang A1 - Adelina Rogowska-Wrzesinska A1 - Peter Roepstorff T1 - On-target sample preparation of 4-sulfophenyl isothiocyanate-derivatized peptides using AnchorChip Targets JO - Journal of Mass Spectrometry Y1 - 2008 SP - 346 EP - 359 VL - 43 IS - 3 UR - http://dx.doi.org/10.1002/jms.1327 ER - TY - JOUR A1 - Ramírez ML A1 - Nelson EC A1 - Evans CP T1 - Beyond prostate-specific antigen: alternate serum markers JO - Prostate Cancer Prostatic Dis Y1 - 2008/01/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/pcan.2008.2 ER - TY - JOUR A1 - Jay W. 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Serrano T1 - Exploring snake venom proteomes: multifaceted analyses for complex toxin mixtures JO - PROTEOMICS Y1 - 2008 SP - 909 EP - 920 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700777 ER - TY - JOUR A1 - Pham TV A1 - van de Wiel MA A1 - Jimenez CR T1 - Support vector machine approach to separate control and breast cancer serum samples JO - Y1 - SP - EP - VL - IS - UR - http://www.bepress.com/sagmb/vol7/iss2/art11 ER - TY - JOUR A1 - Droit A A1 - Hunter JM A1 - Rouleau M A1 - Ethier C A1 - Picard-Cloutier A A1 - Bourgais D A1 - Poirier GG T1 - PARPs Database: A LIMS systems for protein-protein interaction data mining or Laboratory Information management system JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18093328&dopt=Abstract ER - TY - JOUR A1 - Mahal LK T1 - Glycomics: towards bioinformatic approaches to understanding glycosylation JO - Anticancer Agents Med Chem Y1 - 2008 SP - 37 EP - 51 VL - 8 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18220504&dopt=Abstract ER - TY - JOUR A1 - Etienne H. 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Harvey Millar T1 - Resolving and Identifying Protein Components of Plant Mitochondrial Respiratory Complexes Using Three Dimensions of Gel Electrophoresis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 786 EP - 794 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700595p ER - TY - JOUR A1 - Palminiello S A1 - Kida E A1 - Kaur K A1 - Walus M A1 - Wisniewski KE A1 - Wierzba-Bobrowicz T A1 - Rabe A A1 - Albertini G A1 - Golabek AA T1 - Increased levels of carbonic anhydrase II in the developing Down syndrome brain JO - Brain Res Y1 - 2007/11/22 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.brainres.2007.11.023 ER - TY - JOUR A1 - McLafferty FW A1 - Breuker K A1 - Jin M A1 - Han X A1 - Infusini G A1 - Jiang H A1 - Kong X A1 - Begley TP T1 - Top-down MS, a powerful complement to the high capabilities of proteolysis proteomics JO - FEBS J Y1 - 2007 SP - 6256 EP - 68 VL - 274 IS - 24 UR - http://dx.doi.org/10.1111/j.1742-4658.2007.06147.x ER - TY - JOUR A1 - Kenyon M. 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Blanco T1 - Proteomic analysis of human osteoarthritic chondrocytes reveals protein changes in stress and glycolysis JO - PROTEOMICS Y1 - 2008 SP - 495 EP - 507 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700249 ER - TY - JOUR A1 - Skrabanek L A1 - Saini HK A1 - Bader GD A1 - Enright AJ T1 - Computational prediction of protein-protein interactions JO - Mol Biotechnol Y1 - 2008 SP - 1 EP - 17 VL - 38 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18095187&dopt=Abstract ER - TY - JOUR A1 - Christopher J. Johnson A1 - Nikolay Zhukovsky A1 - Anthony E. G. Cass A1 - Judit M. Nagy T1 - Proteomics, nanotechnology and molecular diagnostics JO - PROTEOMICS Y1 - 2008 SP - 715 EP - 730 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700665 ER - TY - JOUR A1 - Michael Hamacher A1 - Katrin Marcus A1 - Christian Stephan A1 - Joachim Klose A1 - Young Mok Park A1 - Helmut E. Meyer T1 - HUPO Brain Proteome Project: Toward a Code of Conduct JO - Y1 - SP - EP - VL - IS - UR - http://www.mcponline.org/cgi/content/full/7/2/457?etoc ER - TY - JOUR A1 - Jennifer Geddes A1 - François Eudes A1 - André Laroche A1 - L. Brent Selinger T1 - Differential expression of proteins in response to the interaction between the pathogen Fusarium graminearum and its host, Hordeum vulgare JO - PROTEOMICS Y1 - 2008 SP - 545 EP - 554 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700115 ER - TY - JOUR A1 - Pierre Chaurand A1 - Mohammad A. Rahman A1 - Tamela Hunt A1 - James A. Mobley A1 - Guangyu Gu A1 - Joey C. Latham A1 - Richard M. Caprioli A1 - Susan Kasper T1 - Monitoring Mouse Prostate Development by Profiling and Imaging Mass Spectrometry JO - Mol Cell Proteomics Y1 - 2008 SP - 411 EP - 423 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/411?etoc ER - TY - JOUR A1 - Buhimschi IA A1 - Zambrano E A1 - Pettker CM A1 - Bahtiyar MO A1 - Paidas M A1 - Rosenberg VA A1 - Thung S A1 - Salafia CM A1 - Buhimschi CS T1 - Using Proteomic Analysis of the Human Amniotic Fluid to Identify Histologic Chorioamnionitis JO - Obstet Gynecol Y1 - 2008 SP - 403 EP - 412 VL - 111 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18238979&dopt=Abstract ER - TY - JOUR A1 - Alla Yu. Rubina A1 - Alexander Kolchinsky A1 - Alexander A. Makarov A1 - Alexander S. Zasedatelev T1 - Why 3-D? Gel-based microarrays in proteomics JO - PROTEOMICS Y1 - 2008 SP - 817 EP - 831 VL - 8 IS - 4 UR - http://dx.doi.org/10.1002/pmic.200700629 ER - TY - JOUR A1 - Gary B Smejkal A1 - Mary H Schweitzer T1 - Will current technologies enable dinosaur proteomics? JO - Expert Review of Proteomics Y1 - 2007 SP - 695 EP - 699 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.695 ER - TY - JOUR A1 - Kasinath Viswanathan A1 - Klaus Früh T1 - Viral proteomics: global evaluation of viruses and their interaction with the host JO - Expert Review of Proteomics Y1 - 2007 SP - 815 EP - 829 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.815 ER - TY - JOUR A1 - Jeffrey S. Morris A1 - Brittan N. Clark A1 - Howard B. Gutstein T1 - Pinnacle: a fast, automatic and accurate method for detecting and quantifying protein spots in 2-dimensional gel electrophoresis data JO - Bioinformatics Y1 - 2008 SP - 529 EP - 536 VL - 24 IS - 4 UR - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/24/4/529?etoc ER - TY - JOUR A1 - Edouard C Nice T1 - 4th International Peptide Symposium in conjunction with the 7th Australian Peptide Symposium and the 2nd Asia-Pacific International Peptide Symposium JO - Expert Review of Proteomics Y1 - 2007 SP - 705 EP - 707 VL - 4 IS - 6 UR - http://dx.doi.org/10.1586/14789450.4.6.705 ER - TY - JOUR A1 - Wei YS A1 - Zheng YH A1 - Liang WB A1 - Zhang JZ A1 - Yang ZH A1 - Lv ML A1 - Jia J A1 - Zhang L T1 - Identification of serum biomarkers for nasopharyngeal carcinoma by proteomic analysis JO - Cancer Y1 - 2008 SP - 544 EP - 51 VL - 112 IS - 3 UR - http://dx.doi.org/10.1002/cncr.23204 ER - TY - JOUR A1 - Hassan MI A1 - Kumar V A1 - Singh TP A1 - Yadav S T1 - Proteomic analysis of human amniotic fluid from Rh(-) pregnancy JO - Prenat Diagn Y1 - 2008 SP - 102 EP - 108 VL - 28 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18236421&dopt=Abstract ER - TY - JOUR A1 - Barrett JH A1 - Cairns DA T1 - Application of the random forest classification method to peaks detected from mass spectrometric proteomic profiles of cancer patients and controls JO - Y1 - SP - EP - VL - IS - UR - http://www.bepress.com/sagmb/vol7/iss2/art4 ER - TY - JOUR A1 - Minden J T1 - Comparative proteomics and difference gel electrophoresis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18251249&dopt=Abstract ER - TY - JOUR A1 - Julia R. Smith A1 - Isaac R. Matus A1 - Daniel A. Beard A1 - Andrew S. Greene T1 - Differential expression of cardiac mitochondrial proteins JO - PROTEOMICS Y1 - 2008 SP - 446 EP - 462 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200701009 ER - TY - JOUR A1 - Silvia Barcelo-Batllori A1 - Susana G. Kalko A1 - Yaiza Esteban A1 - Silvia Moreno A1 - Maria C. Carmona A1 - Ramon Gomis T1 - Integration of DIGE and Bioinformatics Analyses Reveals a Role of the Antiobesity Agent Tungstate in Redox and Energy Homeostasis Pathways in Brown Adipose Tissue JO - Mol Cell Proteomics Y1 - 2008 SP - 378 EP - 393 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/378?etoc ER - TY - JOUR A1 - Okutucu B A1 - Zihnioglu F A1 - Telefoncu A T1 - Shell-core imprinted polyacrylamide crosslinked chitosan for albumin removal from plasma JO - J Biomed Mater Res A Y1 - 2008 SP - 842 EP - 5 VL - 84 IS - 3 UR - http://dx.doi.org/10.1002/jbm.a.31714 ER - TY - JOUR A1 - Hakan Sarioglu A1 - Stefanie Brandner A1 - Markus Haberger A1 - Carola Jacobsen A1 - Josef Lichtmannegger A1 - Mark Wormke A1 - Ulrich Andrae T1 - Analysis of 2,3,7,8-Tetrachlorodibenzo-p-dioxin-induced Proteome Changes in 5L Rat Hepatoma Cells Reveals Novel Targets of Dioxin Action Including the Mitochondrial Apoptosis Regulator VDAC2 JO - Mol Cell Proteomics Y1 - 2008 SP - 394 EP - 410 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/394?etoc ER - TY - JOUR A1 - Jia Liu A1 - Jin Ouyang A1 - Willy R. 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Delanghe A1 - Zhenzhen Wang A1 - Jinxiu Liu A1 - Huiying Zhang T1 - A novel probe for chemiluminescent image detection of proteins in two-dimensional gel electrophoresis JO - ELECTROPHORESIS Y1 - 2008 SP - 716 EP - 725 VL - 29 IS - 3 UR - http://dx.doi.org/10.1002/elps.200700424 ER - TY - JOUR A1 - Bellet V A1 - Boissière F A1 - Bibeau F A1 - Desmetz C A1 - Berthe M A1 - Rochaix P A1 - Maudelonde T A1 - Mangé A A1 - Solassol J T1 - Proteomic analysis of RCL2 paraffin-embedded tissues JO - J Cell Mol Med Y1 - 2007/12/10 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1582-4934.2007.00186.x ER - TY - JOUR A1 - Cheng AL A1 - Huang WG A1 - Chen ZC A1 - Peng F A1 - Zhang PF A1 - Li MY A1 - Li F A1 - Li JL A1 - Li C A1 - Yi H A1 - Yi B A1 - Xiao ZQ T1 - Identification of Novel Nasopharyngeal Carcinoma Biomarkers by Laser Capture Microdissection and Proteomic Analysis JO - Clin Cancer Res Y1 - 2008 SP - 435 EP - 445 VL - 14 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18223218&dopt=Abstract ER - TY - JOUR A1 - Laaksamo E A1 - Tulamo R A1 - Baumann M A1 - Dashti R A1 - Hernesniemi J A1 - Juvela S A1 - Niemelä M A1 - Laakso A T1 - Involvement of Mitogen-Activated Protein Kinase Signaling in Growth and Rupture of Human Intracranial Aneurysms JO - Stroke Y1 - 2008 SP - 886 EP - 92 VL - 39 IS - 3 UR - http://dx.doi.org/10.1161/STROKEAHA.107.497875 ER - TY - JOUR A1 - Helleman J A1 - van der Vlies D A1 - Jansen MP A1 - Luider TM A1 - van der Burg ME A1 - Stoter G A1 - Berns EM T1 - Serum proteomic patterns for ovarian cancer monitoring JO - Int J Gynecol Cancer Y1 - 2007/11/19 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1525-1438.2007.01139.x ER - TY - JOUR A1 - Beyer M A1 - Nesterov A A1 - Block I A1 - König K A1 - Felgenhauer T A1 - Fernandez S A1 - Leibe K A1 - Torralba G A1 - Hausmann M A1 - Trunk U A1 - Lindenstruth V A1 - Bischoff FR A1 - Stadler V A1 - Breitling F T1 - Combinatorial synthesis of peptide arrays onto a microchip JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18096799&dopt=Abstract ER - TY - JOUR A1 - John P. Bannantine A1 - W. Ray Waters A1 - Judith R. Stabel A1 - Mitchell V. Palmer A1 - Lingling Li A1 - Vivek Kapur A1 - Michael L. Paustian T1 - Development and use of a partial Mycobacterium avium subspecies paratuberculosis protein array JO - PROTEOMICS Y1 - 2008 SP - 463 EP - 474 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700644 ER - TY - JOUR A1 - Blankman JL A1 - Simon GM A1 - Cravatt BF T1 - A Comprehensive Profile of Brain Enzymes that Hydrolyze the Endocannabinoid 2-Arachidonoylglycerol JO - Chem Biol Y1 - 2007 SP - 1347 EP - 56 VL - 14 IS - 12 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18096503&dopt=Abstract ER - TY - JOUR A1 - Ulrich Rothbauer A1 - Kourosh Zolghadr A1 - Serge Muyldermans A1 - Aloys Schepers,M. Cristina Cardoso A1 - Heinrich Leonhardt T1 - A Versatile Nanotrap for Biochemical and Functional Studies with Fluorescent Fusion Proteins JO - Mol Cell Proteomics Y1 - 2008 SP - 282 EP - 289 VL - 7 IS - 2 UR - http://www.mcponline.org/cgi/content/abstract/7/2/282?etoc ER - TY - JOUR A1 - Zamora DO A1 - Riviere M A1 - Choi D A1 - Pan Y A1 - Planck SR A1 - Rosenbaum JT A1 - David LL A1 - Smith JR T1 - Proteomic profiling of human retinal and choroidal endothelial cells reveals molecular heterogeneity related to tissue of origin JO - Mol Vis Y1 - 2007 SP - 2058 EP - 65 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18079679&dopt=Abstract ER - TY - JOUR A1 - Ross JA A1 - Nagy ZS A1 - Kirken RA T1 - The Phb1/2 phospho-complex is required for mitochondrial homeostasis and survival of human T cells JO - J Biol Chem Y1 - 2008 SP - 4699 EP - 713 VL - 283 IS - 8 UR - http://dx.doi.org/10.1074/jbc.M708232200 ER - TY - JOUR A1 - Kling P A1 - Norman A A1 - Andersson PL A1 - Norrgren L A1 - Förlin L T1 - Gender-specific proteomic responses in zebrafish liver following exposure to a selected mixture of brominated flame retardants(,) JO - Ecotoxicol Environ Saf Y1 - 2008/02/5 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.ecoenv.2007.12.010 ER - TY - JOUR A1 - Takeuchi F A1 - Baba T A1 - Hiramatsu K T1 - Comparative analysis of MRSA JO - Methods Mol Biol Y1 - 2007 SP - 153 EP - 68 VL - 391 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18025676&dopt=Abstract ER - TY - JOUR A1 - Gesslbauer B A1 - Krenn E A1 - Zenzmaier C A1 - Preisegger KH A1 - Kungl AJ T1 - Lessons from the stem cell proteome JO - Curr Stem Cell Res Ther Y1 - 2006 SP - 395 EP - 409 VL - 1 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18220883&dopt=Abstract ER - TY - JOUR A1 - Guoan Zhang A1 - David Fenyö A1 - Thomas A. Neubert T1 - Use of DNA Ladders for Reproducible Protein Fractionation by Sodium Dodecyl Sulfate−Polyacrylamide Gel Electrophoresis (SDS−PAGE) for Quantitative Proteomics JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 678 EP - 686 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr700601y ER - TY - JOUR A1 - Robinson CV A1 - Sali A A1 - Baumeister W T1 - The molecular sociology of the cell JO - Nature Y1 - 2007 SP - 973 EP - 82 VL - 450 IS - 7172 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18075576&dopt=Abstract ER - TY - JOUR A1 - Charles Ansong A1 - Hyunjin Yoon A1 - Angela D. Norbeck A1 - Jean K. Gustin A1 - Jason E. McDermott A1 - Heather M. Mottaz A1 - Joanne Rue A1 - Joshua N. Adkins A1 - Fred Heffron A1 - Richard D. Smith T1 - Proteomics Analysis of the Causative Agent of Typhoid Fever JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 546 EP - 557 VL - 7 IS - 02 UR - http://dx.doi.org/10.1021/pr070434u ER - TY - JOUR A1 - Michael Berna A1 - Lee Ott A1 - Steve Engle A1 - David Watson A1 - Philip Solter A1 - Bradley Ackermann T1 - Quantification of NTproBNP in Rat Serum Using Immunoprecipitation and LC/MS/MS: a Biomarker of Drug-Induced Cardiac Hypertrophy JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 561 EP - 566 VL - 80 IS - 3 UR - http://dx.doi.org/10.1021/ac702311m ER - TY - JOUR A1 - Daniel Stalder A1 - André Haeberli A1 - Manfred Heller T1 - Evaluation of reproducibility of protein identification results after multidimensional human serum protein separation JO - PROTEOMICS Y1 - 2008 SP - 414 EP - 424 VL - 8 IS - 3 UR - http://dx.doi.org/10.1002/pmic.200700527 ER - TY - JOUR A1 - Seungjin Na A1 - Eunok Paek A1 - Cheolju Lee T1 - CIFTER: Automated Charge-State Determination for Peptide Tandem Mass Spectra JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 1520 EP - 1528 VL - 80 IS - 5 UR - http://dx.doi.org/10.1021/ac702038q ER - TY - JOUR A1 - Smith JR A1 - Matus I A1 - Greene AS T1 - A comparison of 2-D chromatography separations using UV and( 18)O quantification of proteins in similar proteomes JO - J Sep Sci Y1 - 2008 SP - 314 EP - 20 VL - 31 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18246581&dopt=Abstract ER - TY - JOUR A1 - Xin Guo A1 - Pradipta Bandyopadhyay A1 - Birgit Schilling A1 - Malin M. Young A1 - Naoaki Fujii A1 - Tiba Aynechi A1 - R. Kiplin Guy A1 - Irwin D. Kuntz A1 - Bradford W. Gibson T1 - Partial Acetylation of Lysine Residues Improves Intraprotein Cross-Linking JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 951 EP - 960 VL - 80 IS - 4 UR - http://dx.doi.org/10.1021/ac701636w ER - TY - JOUR A1 - Righetti A1 - Pier G.; Boschetti A1 - Egisto; Monsarrat A1 - Bernard T1 - The Invisible Proteome: How to Capture the Low-Abundance Proteins Via Combinatorial Ligand Libraries JO - Current Proteomics Y1 - 2007 SP - 198 EP - 208 VL - 4 IS - 4 UR - http://www.ingentaconnect.com/content/ben/cp/2007/00000004/00000004/art00002 ER -