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Heckel A1 - Susanne Preiss T1 - Mapping the Larval Midgut Lumen Proteome of Helicoverpa armigera, a Generalist Herbivorous Insect JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1629 EP - 1639 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7006208 ER - TY - JOUR A1 - Roxas BA A1 - Li Q T1 - Significance analysis of microarray for relative quantitation of LC/MS data in proteomics JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18402702&dopt=Abstract ER - TY - JOUR A1 - Melinda E. Sanders A1 - Eduardo C. Dias A1 - Baogang J. Xu A1 - James A. Mobley A1 - Dean Billheimer A1 - Heinrich Roder A1 - Julia Grigorieva A1 - Mitchell Dowsett A1 - Carlos L. Arteaga A1 - Richard M. Caprioli T1 - Differentiating Proteomic Biomarkers in Breast Cancer by Laser Capture Microdissection and MALDI MS JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1500 EP - 1507 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7008109 ER - TY - JOUR A1 - Alberto Paradela and Juan Pablo Albar T1 - Advances in the Analysis of Protein Phosphorylation JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1809 EP - 1818 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7006544 ER - TY - JOUR A1 - Mayr M A1 - Zampetaki A A1 - Sidibe A A1 - Mayr U A1 - Yin X A1 - De Souza AI A1 - Chung YL A1 - Madhu B A1 - Quax PH A1 - Hu Y A1 - Griffiths JR A1 - Xu Q T1 - Proteomic and Metabolomic Analysis of Smooth Muscle Cells Derived From the Arterial Media and Adventitial Progenitors of Apolipoprotein E-Deficient Mice JO - Circ Res Y1 - 2008/04/3 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18388323&dopt=Abstract ER - TY - JOUR A1 - Butt YK A1 - Lo SC T1 - Detecting nitrated proteins by proteomic technologies JO - Methods Enzymol Y1 - 2008 SP - 17 EP - 31 VL - 440 IS - UR - http://dx.doi.org/10.1016/S0076-6879(07)00802-6 ER - TY - JOUR A1 - Shabaz Mohammed A1 - Karsten Kraiczek A1 - Martijn W. H. Pinkse A1 - Simone Lemeer A1 - Joris J. Benschop A1 - Albert J. R. Heck T1 - Chip-Based Enrichment and NanoLC−MS/MS Analysis of Phosphopeptides from Whole Lysates JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1565 EP - 1571 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700635a ER - TY - JOUR A1 - Simon ES A1 - Young M A1 - Chan A A1 - Bao ZQ A1 - Andrews PC T1 - Improved enrichment strategies for phosphorylated peptides on titanium dioxide using methyl esterification and pH gradient elution JO - Anal Biochem Y1 - 2008/03/22 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18396144&dopt=Abstract ER - TY - JOUR A1 - Bertucci F A1 - Goncalves A T1 - Clinical proteomics and breast cancer: strategies for diagnostic and therapeutic biomarker discovery JO - Future Oncol Y1 - 2008 SP - 271 EP - 87 VL - 4 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18407739&dopt=Abstract ER - TY - JOUR A1 - Paolo Sonego A1 - Andras Kocsor A1 - Sandor Pongor T1 - ROC analysis: applications to the classification of biological sequences and 3D structures JO - Brief Bioinform Y1 - 2008 SP - 198 EP - 209; doi:10.1093/bib/bbm064 VL - 9 IS - 3 UR - http://bib.oxfordjournals.org/cgi/content/abstract/9/3/198?etoc ER - TY - JOUR A1 - Susan E. Abbatiello A1 - Yuan-Xiang Pan A1 - Mi Zhou A1 - Alan S. Wayne A1 - Timothy D. Veenstra A1 - Stephen P. Hunger A1 - Michael S. Kilberg A1 - John R. Eyler A1 - Nigel G.J. Richards A1 - Thomas P. Conrads T1 - Mass spectrometric quantification of asparagine synthetase in circulating leukemia cells from acute lymphoblastic leukemia patients JO - Journal of Proteomics Y1 - 2008 SP - 61 EP - 70 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RB6JNY-1/1/dfeb47bb5f9a4bf369488a590771b047 ER - TY - JOUR A1 - Xinning Jiang A1 - Guanghui Han A1 - Shun Feng A1 - Xiaogang Jiang A1 - Mingliang Ye A1 - Xuebiao Yao A1 - Hanfa Zou T1 - Automatic Validation of Phosphopeptide Identifications by the MS2/MS3 Target-Decoy Search Strategy JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1640 EP - 1649 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700675j ER - TY - JOUR A1 - Luo Q A1 - Gu Y A1 - Wu SL A1 - Rejtar T A1 - Karger BL T1 - Two-dimensional strong cation exchange/porous layer open tubular/mass spectrometry for ultratrace proteomic analysis using a 10 mum id poly(styrene- divinylbenzene) porous layer open tubular column with an on-line triphasic trapping column JO - Electrophoresis Y1 - 2008/03/26 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18383016&dopt=Abstract ER - TY - JOUR A1 - Krause F A1 - Seelert H T1 - Detection and analysis of protein-protein interactions of organellar and prokaryotic proteomes by blue native and colorless native gel electrophoresis JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/0471140864.ps1411s51 ER - TY - JOUR A1 - Alexandre Panchaud A1 - Michael Affolter A1 - Philippe Moreillon A1 - Martin Kussmann T1 - Experimental and computational approaches to quantitative proteomics: Status quo and outlook JO - Journal of Proteomics Y1 - 2008 SP - 19 EP - 33 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RDS49J-1/1/ebcc16b998dd7cc6631a658fe9668200 ER - TY - JOUR A1 - Maureen B. 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Cooke T1 - Precision enhancement of MALDI-TOF MS using high resolution peak detection and label-free alignment JO - PROTEOMICS Y1 - 2008 SP - 1530 EP - 1538 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200701146 ER - TY - JOUR A1 - Pesavento JJ A1 - Bullock CR A1 - Leduc RD A1 - Mizzen CA A1 - Kelleher NL T1 - Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry JO - J Biol Chem Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18381279&dopt=Abstract ER - TY - JOUR A1 - Rupper A A1 - Cardelli J T1 - Large-scale purification of latex bead phagosomes from mouse macrophage cell lines and subsequent preparation for high-throughput quantitative proteomics JO - Methods Mol Biol Y1 - 2008 SP - 339 EP - 51 VL - 445 IS - UR - http://dx.doi.org/10.1007/978-1-59745-157-4_22 ER - TY - JOUR A1 - Buhr N A1 - Carapito C A1 - Schaeffer C A1 - Kieffer E A1 - Van Dorsselaer A A1 - Viville S T1 - Nuclear proteome analysis of undifferentiated mouse embryonic stem and germ cells JO - Electrophoresis Y1 - 2008/04/30 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18449859&dopt=Abstract ER - TY - JOUR A1 - Buhimschi CS A1 - Rosenberg VA A1 - Dulay AT A1 - Thung S A1 - Sfakianaki AK A1 - Bahtiyar MO A1 - Buhimschi IA T1 - Multidimensional system biology: genetic markers and proteomic biomarkers of adverse pregnancy outcome in preterm birth JO - Am J Perinatol Y1 - 2008 SP - 175 EP - 87 VL - 25 IS - 3 UR - http://dx.doi.org/10.1055/s-2008-1061497 ER - TY - JOUR A1 - Jurkunas UV A1 - Rawe I A1 - Bitar MS A1 - Zhu C A1 - Harris DL A1 - Colby K A1 - Joyce NC T1 - Decreased Expression of Peroxiredoxins in Fuchs' Endothelial Dystrophy JO - Invest Ophthalmol Vis Sci Y1 - 2008/03/31 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378575&dopt=Abstract ER - TY - JOUR A1 - Hui L A1 - Diandong H A1 - Baoxia Z A1 - Da W A1 - Hong Y A1 - Xiaoyi W T1 - Serum Proteomic Profiling Associated with Immune System Impaired by Stress Using ProteinChip Technology JO - Neuroimmunomodulation Y1 - 2008 SP - 326 EP - 330 VL - 14 IS - 6 UR - http://dx.doi.org/10.1159/000126921 ER - TY - JOUR A1 - Cha S A1 - Zhang H A1 - Ilarslan HI A1 - Wurtele ES A1 - Brachova L A1 - Nikolau BJ A1 - Yeung ES T1 - DIRECT PROFILING AND IMAGING OF PLANT METABOLITES IN INTACT TISSUES BY USING COLLOIDAL GRAPHITE-ASSISTED LASER DESORPTION IONIZATION (GALDI) MASS SPECTROMETRY JO - Plant J Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18397372&dopt=Abstract ER - TY - JOUR A1 - Seyfried NT A1 - Xu P A1 - Duong DM A1 - Cheng D A1 - Hanfelt J A1 - Peng J T1 - Systematic Approach for Validating the Ubiquitinated Proteome JO - Anal Chem Y1 - 2008 Apr 24 SP - EP - VL - IS - UR - http://dx.doi.org/10.1021/ac702516a ER - TY - JOUR A1 - Wenqiang Tang A1 - Zhiping Deng A1 - Juan A. Oses-Prieto A1 - Nagi Suzuki A1 - Shengwei Zhu A1 - Xin Zhang A1 - Alma L. Burlingame A1 - Zhi-Yong Wang T1 - Proteomics Studies of Brassinosteroid Signal Transduction Using Prefractionation and Two-dimensional DIGE JO - Mol Cell Proteomics Y1 - 2008 SP - 728 EP - 738 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/728?etoc ER - TY - JOUR A1 - Lorenzen K A1 - Olia AS A1 - Uetrecht C A1 - Cingolani G A1 - Heck AJ T1 - Determination of Stoichiometry and Conformational Changes in the First Step of the P22 Tail Assembly JO - J Mol Biol Y1 - 2008/02/15 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18448123&dopt=Abstract ER - TY - JOUR A1 - Saw Yen Ow A1 - Tanai Cardona A1 - Arnaud Taton A1 - Ann Magnuson A1 - Peter Lindblad A1 - Karin Stensjö A1 - Phillip C. Wright T1 - Quantitative Shotgun Proteomics of Enriched Heterocysts from Nostoc sp. PCC 7120 Using 8-Plex Isobaric Peptide Tags JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1615 EP - 1628 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700604v ER - TY - JOUR A1 - Irene Messana A1 - Tiziana Cabras A1 - Elisabetta Pisano A1 - Maria Teresa Sanna A1 - Alessandra Olianas A1 - Barbara Manconi A1 - Mariagiuseppina Pellegrini A1 - Gaetano Paludetti A1 - Emanuele Scarano A1 - Antonella Fiorita A1 - Stefania Agostino A1 - Alessia M. Contucci A1 - Lea Calo A1 - Pasqualina M. T1 - Trafficking and Postsecretory Events Responsible for the Formation of Secreted Human Salivary Peptides: A Proteomics Approach JO - Mol Cell Proteomics Y1 - 2008 SP - 911 EP - 926 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/911?etoc ER - TY - JOUR A1 - Fulvio Magni A1 - Clizia Chinello A1 - Francesca Raimondo A1 - Paolo Mocarelli A1 - Marzia Galli Kienle A1 - Marina Pitto T1 - AQP1 expression analysis in human diseases: implications for proteomic characterization JO - Expert Review of Proteomics Y1 - 2008 SP - 29 EP - 44 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.29 ER - TY - JOUR A1 - Gorji Marzban A1 - Anita Herndl A1 - Fatemeh Maghuly A1 - Hermann Katinger A1 - Margit Laimer T1 - Mapping of fruit allergens by 2D electrophoresis and immunodetection JO - Expert Review of Proteomics Y1 - 2008 SP - 61 EP - 75 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.61 ER - TY - JOUR A1 - Ying Zhang A1 - Eden P. Go A1 - Heather Desaire T1 - Maximizing Coverage of Glycosylation Heterogeneity in MALDI-MS Analysis of Glycoproteins with Up to 27 Glycosylation Sites JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3144 EP - 3158 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac702081a ER - TY - JOUR A1 - Lin Y A1 - Zhou J A1 - Bi D A1 - Chen P A1 - Wang X A1 - Liang S T1 - Sodium-deoxycholate-assisted tryptic digestion and identification of proteolytically resistant proteins JO - Anal Biochem Y1 - 2008/03/14 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384734&dopt=Abstract ER - TY - JOUR A1 - Stroher E A1 - Dietz KJ A1 - Mittler R T1 - The dynamic thiol-disulphide redox proteome of the Arabidopsis thaliana chloroplast as revealed by differential electrophoretic mobility JO - Physiol Plant Y1 - 2008 Apr 19 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1399-3054.2008.01103.x ER - TY - JOUR A1 - Yanhong Wei A1 - Leo. L. Chan A1 - Dazhi Wang A1 - Hongxia Zhang A1 - Jianshe Wang A1 - Jiayin Dai T1 - Proteomic Analysis of Hepatic Protein Profiles in Rare Minnow (Gobiocypris rarus) Exposed to Perfluorooctanoic Acid JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1729 EP - 1739 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7008059 ER - TY - JOUR A1 - Kang Y A1 - Nagy JM A1 - Polak JM A1 - Mantalaris A T1 - Proteomic characterisation of the conditioned media produced by the visceral endoderm-like cell lines HepG2 and End2: Towards a defined medium for the osteogenic/chondrogenic differentiation of embryonic stem cells JO - Stem Cells Dev Y1 - 2008/03/31 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18393639&dopt=Abstract ER - TY - JOUR A1 - Hana Kovarova A1 - Suresh Jivan Gadher A1 - Alexander Archakov T1 - 1st Central and Eastern European Proteomic Conference and 3rd Czech Proteomic Conference JO - Expert Review of Proteomics Y1 - 2008 SP - 25 EP - 28 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.25 ER - TY - JOUR A1 - Schiffer E A1 - Mischak H A1 - Vanholder RC T1 - Exploring the uremic toxins using proteomic technologies JO - Contrib Nephrol Y1 - 2008 SP - 159 EP - 71 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401168&dopt=Abstract ER - TY - JOUR A1 - Ramström M A1 - Zuberovic A A1 - Grönwall C A1 - Hanrieder J A1 - Bergquist J A1 - Hober S T1 - Development of affinity columns for the removal of high-abundant proteins in cerebrospinal fluid JO - Biotechnol Appl Biochem Y1 - 2008/04/15 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18412541&dopt=Abstract ER - TY - JOUR A1 - Mehta A A1 - Magalhães BS A1 - Souza DS A1 - Vasconcelos EA A1 - Silva LP A1 - Grossi-de-Sa MF A1 - Franco OL A1 - da Costa PH A1 - Rocha TL T1 - Rooteomics: the challenge of discovering plant defense-related proteins in roots JO - Curr Protein Pept Sci Y1 - 2008 SP - 108 EP - 16 VL - 9 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18393883&dopt=Abstract ER - TY - JOUR A1 - Copeland RJ A1 - Bullen Jr JW A1 - Hart GW T1 - Crosstalk Between GlcNAcylation and Phosphorylation: Roles in Insulin Resistance and Glucose Toxicity JO - Am J Physiol Endocrinol Metab Y1 - 2008/04/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18445751&dopt=Abstract ER - TY - JOUR A1 - Jon Barbour A1 - Eva M. Neuhaus A1 - Heike Piechura A1 - Nadine Stoepel A1 - Anastasia Mashukova A1 - Daniela Brunert A1 - Barbara Sitek A1 - Kai Stühler A1 - Helmut E. Meyer A1 - Hanns Hatt A1 - Bettina Warscheid T1 - New Insight into Stimulus-Induced Plasticity of the Olfactory Epithelium in Mus musculus by Quantitative Proteomics JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1594 EP - 1605 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7005796 ER - TY - JOUR A1 - Ching-Seng Ang A1 - Paul D. Veith A1 - Stuart G. Dashper A1 - Eric C. Reynolds T1 - Application of 16O/18O reverse proteolytic labeling to determine the effect of biofilm culture on the cell envelope proteome of Porphyromonas gingivalis W50 JO - PROTEOMICS Y1 - 2008 SP - 1645 EP - 1660 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700557 ER - TY - JOUR A1 - Bigelow DJ A1 - Qian WJ T1 - Quantitative proteome mapping of nitrotyrosines JO - Methods Enzymol Y1 - 2008 SP - 191 EP - 205 VL - 440 IS - UR - http://dx.doi.org/10.1016/S0076-6879(07)00811-7 ER - TY - JOUR A1 - Giancarlo Liumbruno A1 - Gian Maria D'Amici A1 - Giuliano Grazzini A1 - Lello Zolla T1 - Transfusion medicine in the era of proteomics JO - Journal of Proteomics Y1 - 2008 SP - 34 EP - 45 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4S08K21-1/1/018ea9c47253d6d1ee34968731bc191f ER - TY - JOUR A1 - Poon HF A1 - Abdullah L A1 - Reed J A1 - Doore SM A1 - Laird C A1 - Mathura V A1 - Mullan M A1 - Crawford F T1 - Improving image analysis in 2DGE-based redox proteomics by labeling protein carbonyl with fluorescent hydroxylamine JO - Biol Proced Online Y1 - 2007 SP - 65 EP - 72 VL - 9 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18385803&dopt=Abstract ER - TY - JOUR A1 - de Seny D A1 - Fillet M A1 - Ribbens C A1 - Maree R A1 - Meuwis MA A1 - Lutteri L A1 - Chapelle JP A1 - Wehenkel L A1 - Louis E A1 - Merville MP A1 - Malaise M T1 - Monomeric Calgranulins Measured by SELDI-TOF Mass Spectrometry and Calprotectin Measured by ELISA as Biomarkers in Arthritis JO - Clin Chem Y1 - 2008 Apr 24 SP - EP - VL - IS - UR - http://dx.doi.org/10.1373/clinchem.2007.099549 ER - TY - JOUR A1 - Matthew P. Campbell A1 - Louise Royle A1 - Catherine M. Radcliffe A1 - Raymond A. Dwek A1 - Pauline M. Rudd T1 - GlycoBase and autoGU: tools for HPLC-based glycan analysis JO - Bioinformatics Y1 - 2008 SP - 1214 EP - 1216 VL - 24 IS - 9 UR - http://dx.doi.org/10.1093/bioinformatics/btn090 ER - TY - JOUR A1 - Ovidiu Marina A1 - Melinda A. Biernacki A1 - Vladimir Brusic A1 - Catherine J. Wu T1 - A Concentration-Dependent Analysis Method for High Density Protein Microarrays JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2059 EP - 2068 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700892h ER - TY - JOUR A1 - Elvira MI A1 - Galdeano MM A1 - Gilardi P A1 - García-Luque I A1 - Serra MT T1 - Proteomic analysis of pathogenesis-related proteins (PRs) induced by compatible and incompatible interactions of pepper mild mottle virus (PMMoV) in Capsicum chinense L3 plants JO - J Exp Bot Y1 - 2008/03/28 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18375936&dopt=Abstract ER - TY - JOUR A1 - Yue QX A1 - Xie FB A1 - Guan SH A1 - Ma C A1 - Yang M A1 - Jiang BH A1 - Liu X A1 - Guo DA T1 - Interaction of Ganoderma triterpenes with doxorubicin and proteomic characterization of the possible molecular targets of Ganoderma triterpenes JO - Cancer Sci Y1 - 2008 Apr 16 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1349-7006.2008.00824.x ER - TY - JOUR A1 - Kaushik DK A1 - Sehgal D T1 - Developing Antibacterial Vaccines in Genomics and Proteomics Era JO - Scand J Immunol Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18397199&dopt=Abstract ER - TY - JOUR A1 - Zhong H A1 - Yun D A1 - Zhang C A1 - Yang P A1 - Fan H A1 - He F T1 - Comprehensive proteome analysis of mouse liver by ampholyte-free liquid-phase isoelectric focusing JO - Electrophoresis Y1 - 2008/04/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18446803&dopt=Abstract ER - TY - JOUR A1 - Simone Lemeer A1 - Martijn W. H. Pinkse A1 - Shabaz Mohammed A1 - Bas van Breukelen A1 - Jeroen den Hertog A1 - Monique Slijper A1 - Albert J. R. 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Callesen A1 - Werner Vach A1 - Per E. Jørgensen A1 - Søren Cold A1 - Ole Mogensen A1 - Torben A. Kruse A1 - Ole N. Jensen A1 - Jonna S. Madsen T1 - Reproducibility of Mass Spectrometry Based Protein Profiles for Diagnosis of Breast Cancer across Clinical Studies: A Systematic Review JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1395 EP - 1402 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr800115f ER - TY - JOUR A1 - Dihazi H A1 - Koziolek MJ A1 - Söllner T A1 - Kahler E A1 - Klingel R A1 - Neuhoff R A1 - Strutz F A1 - Mueller GA T1 - Protein adsorption during LDL-apheresis: proteomic analysis JO - Nephrol Dial Transplant Y1 - 2008/04/8 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18398017&dopt=Abstract ER - TY - JOUR A1 - Louise Alldridge A1 - Gergana Metodieva A1 - Christina Greenwood A1 - Khalid Al-Janabi A1 - Laura Thwaites A1 - Paul Sauven A1 - Metodi Metodiev T1 - Proteome Profiling of Breast Tumors by Gel Electrophoresis and Nanoscale Electrospray Ionization Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1458 EP - 1469 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7007829 ER - TY - JOUR A1 - Whetton AD A1 - Williamson AJ A1 - Krijgsveld J A1 - Lee BH A1 - Lemischka I A1 - Oh S A1 - Pera M A1 - Mummery C A1 - Heck AJ T1 - The time is right: proteome biology of stem cells JO - Cell Stem Cell Y1 - 2008 SP - 215 EP - 7 VL - 2 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18383624&dopt=Abstract ER - TY - JOUR A1 - Qing Xia A1 - Feng Lu A1 - Hui-Ping Yan A1 - Hong-Xia Wang A1 - Xia Feng A1 - Yan Zhao A1 - Bing-Yv Liu A1 - Jie Wang A1 - Ping Li A1 - Yan Xue A1 - Mei-Ru Hu A1 - Lu Qian A1 - Ning Guo A1 - Song-Cheng Yang A1 - Ming-Yuan Li A1 - Yuan-Fang Ma A1 - Bo-An Li A1 - Xue-Min Zhang A1 - Bei-Fen Shen T1 - Autoantibody Profiling of Chinese Patients with Autoimmune Hepatitis Using Immunoproteomic Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1963 EP - 1970 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700861s ER - TY - JOUR A1 - Leticia M. 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Bisch T1 - Protein expression profile of Gluconacetobacter diazotrophicus PAL5, a sugarcane endophytic plant growth-promoting bacterium JO - PROTEOMICS Y1 - 2008 SP - 1631 EP - 1644 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700912 ER - TY - JOUR A1 - Jun Liu A1 - Zhen Hong A1 - Jianqing Ding A1 - Jianrong Liu A1 - Jing Zhang A1 - Shengdi Chen T1 - Predominant Release of Lysosomal Enzymes by Newborn Rat Microglia After LPS Treatment Revealed by Proteomic Studies JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2033 EP - 2049 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7007779 ER - TY - JOUR A1 - Pearson H T1 - Biologists initiate plan to map human proteome JO - Nature Y1 - 2008 SP - 920 EP - 1 VL - 452 IS - 7190 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18441544&dopt=Abstract ER - TY - JOUR A1 - Bénard L A1 - Litzler PY A1 - Cosette P A1 - Lemeland JF A1 - Jouenne T A1 - Junter GA T1 - Proteomic analysis of Staphylococcus aureus biofilms grown in vitro on mechanical heart valve leaflets JO - J Biomed Mater Res A Y1 - 2008/04/10 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18404712&dopt=Abstract ER - TY - JOUR A1 - Weber G A1 - Wildgruber R T1 - Free-flow electrophoresis system for proteomics applications JO - Methods Mol Biol Y1 - 2008 SP - 703 EP - 16 VL - 384 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18392590&dopt=Abstract ER - TY - JOUR A1 - Bräutigam A A1 - Shrestha RP A1 - Whitten D A1 - Wilkerson CG A1 - Carr KM A1 - Froehlich JE A1 - Weber AP T1 - Low-coverage massively parallel pyrosequencing of cDNAs enables proteomics in non-model species: Comparison of a species-specific database generated by pyrosequencing with databases from related species for proteome analysis of pea chloroplast envelopes JO - J Biotechnol Y1 - 2008/02/17 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18394738&dopt=Abstract ER - TY - JOUR A1 - Candela M A1 - Fiori J A1 - Dipalo S A1 - Naldi M A1 - Gotti R A1 - Brigidi P T1 - Rapid MALDI-TOF-MS analysis in the study of interaction between whole bacterial cells and human target molecules: Binding of Bifidobacterium to human plasminogen JO - J Microbiol Methods Y1 - 2008 Mar 6 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.mimet.2008.02.021 ER - TY - JOUR A1 - Peng J T1 - Evaluation of proteomic strategies for analyzing ubiquitinated proteins JO - BMB Rep Y1 - 2008 SP - 177 EP - 83 VL - 41 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18377720&dopt=Abstract ER - TY - JOUR A1 - Kamiie J T1 - Progress of Drug Transport Study Based on Absolute Quantitative Method for Membrane Transporter Proteins JO - Yakugaku Zasshi Y1 - 2008 SP - 507 EP - 512 VL - 128 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18379169&dopt=Abstract ER - TY - JOUR A1 - Johannes Graumann A1 - Nina C. 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Anagnostopoulos A1 - Aggeliki Kolialexi A1 - Konstantinos Vougas A1 - Nikos Papantoniou A1 - Aris Antsaklis A1 - Michael Fountoulakis A1 - George Th. Tsangaris T1 - Proteomic Analysis of Amniotic Fluid in Pregnancies with Turner Syndrome Fetuses JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1862 EP - 1866 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700588u ER - TY - JOUR A1 - Mara Colzani A1 - Frederic Schutz A1 - Alexandra Potts A1 - Patrice Waridel A1 - Manfredo Quadroni T1 - Relative Protein Quantification by Isobaric SILAC with Immonium Ion Splitting (ISIS) JO - Mol Cell Proteomics Y1 - 2008 SP - 927 EP - 937 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/927?etoc ER - TY - JOUR A1 - Yamazaki Y A1 - Okawa K A1 - Yano T A1 - Tsukita S A1 - Tsukita S T1 - Optimized Proteomic Analysis on Gels of Cell-Cell Adhering Junctional Membrane Proteins JO - Biochemistry Y1 - 2008/04/17 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18416558&dopt=Abstract ER - TY - JOUR A1 - Ming Dong A1 - Lee Lisheng Yang A1 - Katherine Williams A1 - Susan J. Fisher A1 - Steven C. Hall A1 - Mark D. Biggin A1 - Jian Jin A1 - H. Ewa Witkowska T1 - A “Tagless” Strategy for Identification of Stable Protein Complexes Genome-wide by Multidimensional Orthogonal Chromatographic Separation and iTRAQ Reagent Tracking JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1836 EP - 1849 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700624e ER - TY - JOUR A1 - Juan J. Calvete T1 - Journal of Proteomics -- An evolving star in the expanding proteomics galaxy JO - Journal of Proteomics Y1 - 2008 SP - 1 EP - 3 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4S62RW6-1/1/43cfcb103f0eb684ca0b0fa78db78ca5 ER - TY - JOUR T1 - Possible new biomarkers for COPD JO - Expert Review of Proteomics Y1 - 2008 SP - 13 EP - 16 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.13 ER - TY - JOUR A1 - Qing-Xi Yue A1 - Zhi-Wei Cao A1 - Shu-Hong Guan A1 - Xiao-Hui Liu A1 - Lin Tao A1 - Wan-Ying Wu A1 - Yi-Xue Li A1 - Peng-Yuan Yang A1 - Xuan Liu A1 - De-An Guo T1 - Proteomics Characterization of the Cytotoxicity Mechanism of Ganoderic Acid D and Computer-automated Estimation of the Possible Drug Target Network JO - Mol Cell Proteomics Y1 - 2008 SP - 949 EP - 961 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/949?etoc ER - TY - JOUR A1 - Firas H. Kobeissy A1 - Matthew W. Warren A1 - Andrew K. Ottens A1 - Shankar Sadasivan A1 - Zhiqun Zhang A1 - Mark S. Gold A1 - Kevin K. W. Wang T1 - Psychoproteomic Analysis of Rat Cortex Following Acute Methamphetamine Exposure JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1971 EP - 1983 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr800029h ER - TY - JOUR A1 - Corti V A1 - Sanchez-Ruiz Y A1 - Piccoli G A1 - Bergamaschi A A1 - Cannistraci CV A1 - Pattini L A1 - Cerutti S A1 - Bachi A A1 - Alessio M A1 - Malgaroli A T1 - Protein fingerprints of cultured CA3-CA1 hippocampal neurons: comparative analysis of the distribution of synaptosomal and cytosolic proteins JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18402664&dopt=Abstract ER - TY - JOUR A1 - Haizhen Zhang A1 - Xiaoting Tang A1 - Gerhard R. Munske A1 - Natalia Zakharova A1 - Li Yang A1 - Chunxiang Zheng A1 - Megan A. Wolff A1 - Nikola Tolic A1 - Gordon A. Anderson A1 - Liang Shi A1 - Matthew J. Marshall A1 - James K. Fredrickson A1 - James E. Bruce T1 - In Vivo Identification of the Outer Membrane Protein OmcA−MtrC Interaction Network in Shewanella oneidensis MR-1 Cells Using Novel Hydrophobic Chemical Cross-Linkers JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1712 EP - 1720 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7007658 ER - TY - JOUR A1 - Mariella Gruber-Olipitz A1 - Thomas Ströbel A1 - Wei-Qiang Chen A1 - Michael A. Grotzer A1 - Franz Quehenberger A1 - Irene Slavc A1 - Gert Lubec T1 - Synthesis, Chaperoning, and Metabolism of Proteins Are Regulated by NT-3/TrkC Signaling in the Medulloblastoma Cell Line DAOY JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1932 EP - 1944 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700724a ER - TY - JOUR A1 - Melanie K. Gulston A1 - Denis V. Rubtsov A1 - Helen J. Atherton A1 - Kieran Clarke A1 - Kay E. Davies A1 - Kathryn S. Lilley A1 - Julian L. Griffin T1 - A Combined Metabolomic and Proteomic Investigation of the Effects of a Failure to Express Dystrophin in the Mouse Heart JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2069 EP - 2077 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr800070p ER - TY - JOUR A1 - Sylvain Fauquenoy A1 - Willy Morelle A1 - Agnes Hovasse A1 - Audrey Bednarczyk A1 - Christian Slomianny A1 - Christine Schaeffer A1 - Alain Van Dorsselaer A1 - Stanislas Tomavo T1 - Proteomics and Glycomics Analyses of N-Glycosylated Structures Involved in Toxoplasma gondii-Host Cell Interactions JO - Mol Cell Proteomics Y1 - 2008 SP - 891 EP - 910 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/891?etoc ER - TY - JOUR A1 - Klein LL A1 - Jonscher KR A1 - Heerwagen MJ A1 - Gibbs RS A1 - McManaman JL T1 - Shotgun proteomic analysis of vaginal fluid from women in late pregnancy JO - Reprod Sci Y1 - 2008 SP - 263 EP - 73 VL - 15 IS - 3 UR - http://dx.doi.org/10.1177/1933719107311189 ER - TY - JOUR A1 - Keyvanshokooh S A1 - Kalbassi MR A1 - Hosseinkhani S A1 - Vaziri B T1 - Comparative proteomics analysis of male and female Persian sturgeon (Acipenser persicus) gonads JO - Anim Reprod Sci Y1 - 2008/03/20 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18440735&dopt=Abstract ER - TY - JOUR A1 - Traum AZ A1 - Schachter AD T1 - Urinary proteome profiling to search for biomarkers in steroid-resistant nephrotic syndrome JO - Contrib Nephrol Y1 - 2008 SP - 29 EP - 36 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401159&dopt=Abstract ER - TY - JOUR A1 - Simó C A1 - Bachi A A1 - Cattaneo A A1 - Guerrier L A1 - Fortis F A1 - Boschetti E A1 - Podtelejnikov A A1 - Righetti PG T1 - Performance of Combinatorial Peptide Libraries in Capturing the Low-Abundance Proteome of Red Blood Cells. 1. 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Petricoin III T1 - Multiplexed Cell Signaling Analysis of Human Breast Cancer Applications for Personalized Therapy JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1508 EP - 1517 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7008127 ER - TY - JOUR A1 - Klein J A1 - Leupold S A1 - Münch R A1 - Pommerenke C A1 - Johl T A1 - Kärst U A1 - Jänsch L A1 - Jahn D A1 - Retter I T1 - ProdoNet: identification and visualization of prokaryotic gene regulatory and metabolic networks JO - Nucleic Acids Res Y1 - 2008/04/25 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18440972&dopt=Abstract ER - TY - JOUR A1 - Dürrschmid K A1 - Reischer H A1 - Schmidt-Heck W A1 - Hrebicek T A1 - Guthke R A1 - Rizzi A A1 - Bayer K T1 - Monitoring of transcriptome and proteome profiles to investigate the cellular response of E. coli towards recombinant protein expression under defined chemostat conditions JO - J Biotechnol Y1 - 2008/03/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18405993&dopt=Abstract ER - TY - JOUR A1 - Hamid Mirzaei A1 - Joshua K. McBee A1 - Julian Watts A1 - Ruedi Aebersold T1 - Comparative Evaluation of Current Peptide Production Platforms Used in Absolute Quantification in Proteomics JO - Mol Cell Proteomics Y1 - 2008 SP - 813 EP - 823 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/813?etoc ER - TY - JOUR A1 - McDonagh B A1 - Sheehan D T1 - Effects of oxidative stress on protein thiols and disulphides in Mytilus edulis revealed by proteomics: Actin and protein disulphide isomerase are redox targets JO - Mar Environ Res Y1 - 2008/02/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18396326&dopt=Abstract ER - TY - JOUR A1 - Norman Pavelka A1 - Marjorie L. Fournier A1 - Selene K. Swanson A1 - Mattia Pelizzola A1 - Paola Ricciardi-Castagnoli A1 - Laurence Florens A1 - Michael P. Washburn T1 - Statistical Similarities between Transcriptomics and Quantitative Shotgun Proteomics Data JO - Mol Cell Proteomics Y1 - 2008 SP - 631 EP - 644 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/631?etoc ER - TY - JOUR A1 - Juan J. Calvete A1 - Gilberto B. Domont A1 - Gabriel Padrón T1 - Meeting report MPSA 2007 JO - Journal of Proteomics Y1 - 2008 SP - 4 EP - 10 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4S4JYYK-1/1/dfc71bd52f45b9d18b1604c3209cbcbd ER - TY - JOUR A1 - Jia Liu A1 - Zachary A. Hilton A1 - Steven M. Cramer T1 - Chemically Selective Displacers for High-Resolution Protein Separations in Ion-Exchange Systems: Effect of Displacer-Protein Interactions JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3357 EP - 3364 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac702565p ER - TY - JOUR A1 - Schreibelt G A1 - van Horssen J A1 - Haseloff RF A1 - Reijerkerk A A1 - van der Pol SM A1 - Nieuwenhuizen O A1 - Krause E A1 - Blasig IE A1 - Dijkstra CD A1 - Ronken E A1 - de Vries HE T1 - Protective effects of peroxiredoxin-1 at the injured blood-brain barrier JO - Free Radic Biol Med Y1 - 2008/04/16 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18452719&dopt=Abstract ER - TY - JOUR A1 - Charanjit Sandhu A1 - Johannes A. Hewel A1 - Gwenael Badis A1 - Shaheynoor Talukder A1 - Jian Liu A1 - Timothy R. Hughes A1 - Andrew Emili T1 - Evaluation of Data-Dependent versus Targeted Shotgun Proteomic Approaches for Monitoring Transcription Factor Expression in Breast Cancer JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1529 EP - 1541 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700836q ER - TY - JOUR A1 - Tonino Alonzi A1 - Carmine Mancone A1 - Laura Amicone A1 - Marco Tripodi T1 - Elucidation of lipoprotein particles structure by proteomic analysis JO - Expert Review of Proteomics Y1 - 2008 SP - 91 EP - 104 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.91 ER - TY - JOUR A1 - Hoorn EJ A1 - Pisitkun T A1 - Yu MJ A1 - Knepper MA T1 - Proteomic approaches for the study of cell signaling in the renal collecting duct JO - Contrib Nephrol Y1 - 2008 SP - 172 EP - 85 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401169&dopt=Abstract ER - TY - JOUR A1 - Sérgio Mota A1 - Marta Mendes A1 - Deborah Penque A1 - Ana V. Coelho A1 - Celso Cunha T1 - Changes in the proteome of Huh7 cells induced by transient expression of hepatitis D virus RNA and antigens JO - Journal of Proteomics Y1 - 2008 SP - 71 EP - 79 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RH382V-1/1/bc518ff97b9a5a37224ea33f26b0fe26 ER - TY - JOUR A1 - Kussmann M A1 - Rezzi S A1 - Daniel H T1 - Profiling techniques in nutrition and health research JO - Curr Opin Biotechnol Y1 - 2008/03/28 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378135&dopt=Abstract ER - TY - JOUR A1 - Vanessa Leah Mendoza and Richard W. Vachet T1 - Protein Surface Mapping Using Diethylpyrocarbonate with Mass Spectrometric Detection JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 2895 EP - 2904 VL - 80 IS - 8 UR - http://dx.doi.org/10.1021/ac701999b ER - TY - JOUR A1 - Hiroki Kuyama A1 - Keisuke Shima A1 - Kazuhiro Sonomura A1 - Minoru Yamaguchi A1 - Eiji Ando A1 - Osamu Nishimura A1 - Susumu Tsunasawa T1 - A simple and highly successful C-terminal sequence analysis of proteins by mass spectrometry JO - PROTEOMICS Y1 - 2008 SP - 1539 EP - 1550 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200701044 ER - TY - JOUR A1 - Rabbani N A1 - Thornalley PJ T1 - The dicarbonyl proteome: proteins susceptible to dicarbonyl glycation at functional sites in health, aging, and disease JO - Ann N Y Acad Sci Y1 - 2008 SP - 124 EP - 7 VL - 1126 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18448805&dopt=Abstract ER - TY - JOUR A1 - Beligni MV A1 - Mayfield SP T1 - Arabidopsis thaliana mutants reveal a role for CSP41a and CSP41b, two ribosome-associated endonucleases, in chloroplast ribosomal RNA metabolism JO - Plant Mol Biol Y1 - 2008/04/9 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18398686&dopt=Abstract ER - TY - JOUR A1 - Mark A. Baker A1 - Louise Hetherington A1 - Gabi M. Reeves A1 - R. John Aitken T1 - The mouse sperm proteome characterized via IPG strip prefractionation and LC-MS/MS identification JO - PROTEOMICS Y1 - 2008 SP - 1720 EP - 1730 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200701020 ER - TY - JOUR A1 - Steen JA A1 - Steen H A1 - Georgi A A1 - Parker K A1 - Springer M A1 - Kirchner M A1 - Hamprecht F A1 - Kirschner MW T1 - Different phosphorylation states of the anaphase promoting complex in response to antimitotic drugs: a quantitative proteomic analysis JO - Proc Natl Acad Sci U S A Y1 - 2008 SP - 6069 EP - 74 VL - 105 IS - 16 UR - http://dx.doi.org/10.1073/pnas.0709807104 ER - TY - JOUR A1 - Xianquan Zhan A1 - Yunpeng Du A1 - John S. Crabb A1 - Xiaorong Gu A1 - Timothy S. Kern A1 - andJohn W. Crabb T1 - Targets of Tyrosine Nitration in Diabetic Rat Retina JO - Mol Cell Proteomics Y1 - 2008 SP - 864 EP - 874 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/864?etoc ER - TY - JOUR A1 - Magi E A1 - Liscio C A1 - Pistarino E A1 - Santamaria B A1 - Di Carro M A1 - Tiso M A1 - Scaloni A A1 - Renzone G A1 - Cosulich ME T1 - Interdisciplinary study for the evaluation of biochemical alterations on mussel Mytilus galloprovincialis exposed to a tributyltin-polluted area JO - Anal Bioanal Chem Y1 - 2008/04/10 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401576&dopt=Abstract ER - TY - JOUR A1 - Webber MA A1 - Coldham NG A1 - Woodward MJ A1 - Piddock LJ T1 - Proteomic analysis of triclosan resistance in Salmonella enterica serovar Typhimurium JO - J Antimicrob Chemother Y1 - 2008/04/3 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18388111&dopt=Abstract ER - TY - JOUR A1 - Isabelle Jutras A1 - Mathieu Houde A1 - Nathan Currier A1 - Jonathan Boulais A1 - Sophie Duclos A1 - Sylvie LaBoissiere A1 - Eric Bonneil A1 - Paul Kearney A1 - Pierre Thibault A1 - Eustache Paramithiotis A1 - Patrice Hugo A1 - Michel Desjardins T1 - Modulation of the Phagosome Proteome by Interferon-{gamma} JO - Mol Cell Proteomics Y1 - 2008 SP - 697 EP - 715 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/697?etoc ER - TY - JOUR A1 - Lee DG A1 - Ahsan N A1 - Lee SH A1 - Lee JJ A1 - Bahk JD A1 - Kang KY A1 - Lee BH T1 - Chilling stress-induced proteomic changes in rice roots JO - J Plant Physiol Y1 - 2008 Apr 21 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jplph.2008.02.001 ER - TY - JOUR A1 - Guaragna A A1 - Amoresano A A1 - Pinto V A1 - Monti G A1 - Mastrobuoni G A1 - Marino G T1 - Synthesis and Proteomic Activity Evaluation of a new Isotope-Coded Affinity Tagging (ICAT) Reagent JO - Bioconjug Chem Y1 - 2008/04/12 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18407682&dopt=Abstract ER - TY - JOUR A1 - Kumar N A1 - Gammell P A1 - Meleady P A1 - Henry M A1 - Clynes M T1 - Differential Protein Expression Following Low Temperature Culture of Suspension CHO-K1 Cells JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1186/1472-6750-8-42 ER - TY - JOUR A1 - John C. 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Doucette T1 - Rapid and Effective Focusing in a Carrier Ampholyte Solution Isoelectric Focusing System: A Proteome Prefractionation Tool JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1761 EP - 1766 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700677u ER - TY - JOUR A1 - Sobol MA A1 - González-Camacho F A1 - Kordyum EL A1 - Medina FJ T1 - Changes in the two-dimensional proteome of the soluble fraction of nuclear proteins from Lepidium sativum root meristematic cells grown under clinorotation JO - J Gravit Physiol Y1 - 2007 SP - P109 EP - 10 VL - 14 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18372723&dopt=Abstract ER - TY - JOUR A1 - Buettner FF A1 - Bendallah IM A1 - Bosse JT A1 - Dreckmann K A1 - Nash JH A1 - Langford PR A1 - Gerlach GF T1 - Analysis of the Actinobacillus pleuropneumoniae ArcA regulon identifies fumarate reductase as a determinant of virulence JO - Infect Immun Y1 - 2008/03/31 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378638&dopt=Abstract ER - TY - JOUR A1 - Yoshida Y A1 - Miyamoto M A1 - Bo X A1 - Yaoita E A1 - Yamamoto T T1 - Overview of kidney and urine proteome databases JO - Contrib Nephrol Y1 - 2008 SP - 186 EP - 97 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401170&dopt=Abstract ER - TY - JOUR A1 - Butterfield DA A1 - Sultana R T1 - Identification of 3-nitrotyosine-modified brain proteins by redox proteomics JO - Methods Enzymol Y1 - 2008 SP - 295 EP - 308 VL - 440 IS - UR - http://dx.doi.org/10.1016/S0076-6879(07)00819-1 ER - TY - JOUR A1 - Hailing Lu A1 - Vivian Goodell A1 - Mary L. Disis T1 - Humoral Immunity Directed against Tumor-Associated Antigens As Potential Biomarkers for the Early Diagnosis of Cancer JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1388 EP - 1394 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700818f ER - TY - JOUR A1 - Dukes AA A1 - Van Laar VS A1 - Cascio M A1 - Hastings TG T1 - Changes in endoplasmic reticulum stress proteins and aldolase A in cells exposed to dopamine JO - J Neurochem Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384645&dopt=Abstract ER - TY - JOUR A1 - Yuqin Wang A1 - Sabina Muneton A1 - Jan Sjövall A1 - Jasmina N. Jovanovic A1 - William J. Griffiths T1 - The Effect of 24S-Hydroxycholesterol on Cholesterol Homeostasis in Neurons: Quantitative Changes to the Cortical Neuron Proteome JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1606 EP - 1614 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7006076 ER - TY - JOUR A1 - Wang Y A1 - Chen Y A1 - Zhang Y A1 - Wu S A1 - Ma S A1 - Hu S A1 - Zhang L A1 - Shao C A1 - Li M A1 - Gao Y T1 - Differential ConA-enriched urinary proteome in rat experimental glomerular diseases JO - Biochem Biophys Res Commun Y1 - 2008/04/24 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18440303&dopt=Abstract ER - TY - JOUR A1 - Issaq HJ A1 - Nativ O A1 - Waybright T A1 - Luke B A1 - Veenstra TD A1 - Issaq EJ A1 - Kravstov A A1 - Mullerad M T1 - Detection of Bladder Cancer in Human Urine by Metabolomic Profiling Using High Performance Liquid Chromatography/Mass Spectrometry JO - J Urol Y1 - 2008 SP - 2422 EP - 2426 VL - 179 IS - 6 UR - http://dx.doi.org/10.1016/j.juro.2008.01.084 ER - TY - JOUR A1 - Gabriel D. Mazzucchelli A1 - Nicolas A. Cellier A1 - Vakhtang Mshviladzade A1 - Riad Elias A1 - Yong-Ho Shim A1 - David Touboul A1 - Loïc Quinton A1 - Alain Brunelle A1 - Olivier Laprévote A1 - Edwin A. De Pauw A1 - Marie-Claire A. De Pauw-Gillet T1 - Pores Formation on Cell Membranes by Hederacolchiside A1 Leads to a Rapid Release of Proteins for Cytosolic Subproteome Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1683 EP - 1692 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7006973 ER - TY - JOUR A1 - Christian Löbke A1 - Mark Laible A1 - Claudia Rappl A1 - Markus Ruschhaupt A1 - Özgür Sahin A1 - Dorit Arlt A1 - Stefan Wiemann A1 - Annemarie Poustka A1 - Holger Sültmann A1 - Ulrike Korf T1 - Contact spotting of protein microarrays coupled with spike-in of normalizer protein permits time-resolved analysis of ERBB receptor signaling JO - PROTEOMICS Y1 - 2008 SP - 1586 EP - 1594 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700733 ER - TY - JOUR A1 - Posner M A1 - Hawke M A1 - Lacava C A1 - Prince CJ A1 - Bellanco NR A1 - Corbin RW T1 - A proteome map of the zebrafish (Danio rerio) lens reveals similarities between zebrafish and mammalian crystallin expression JO - Mol Vis Y1 - 2008 SP - 806 EP - 14 VL - 14 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18449354&dopt=Abstract ER - TY - JOUR A1 - Siqueira WL A1 - Salih E A1 - Wan DL A1 - Helmerhorst EJ A1 - Oppenheim FG T1 - Proteome of human minor salivary gland secretion JO - J Dent Res Y1 - 2008 SP - 445 EP - 50 VL - 87 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18434574&dopt=Abstract ER - TY - JOUR A1 - Christensen E A1 - Evans KR A1 - Menard C A1 - Pintilie M A1 - Bristow RG T1 - Practical approaches to proteomic biomarkers within prostate cancer radiotherapy trials JO - Cancer Metastasis Rev Y1 - 2008 Apr 22 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s10555-008-9139-6 ER - TY - JOUR A1 - Iveta Dobreva A1 - Andrew Fielding A1 - Leonard J. Foster A1 - Shoukat Dedhar T1 - Mapping the Integrin-Linked Kinase Interactome Using SILAC JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1740 EP - 1749 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700852r ER - TY - JOUR A1 - Laurence Rohmer A1 - Tina Guina A1 - Jinzhi Chen A1 - Byron Gallis A1 - Greg K. Taylor A1 - Scott A. Shaffer A1 - Samuel I. Miller A1 - Mitchell J. Brittnacher A1 - David R. Goodlett T1 - Determination and Comparison of the Francisella tularensis subsp.novicida U112 Proteome to Other Bacterial Proteomes JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2016 EP - 2024 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700760z ER - TY - JOUR A1 - Robert Sutak A1 - Xiangcong Xu A1 - Megan Whitnall A1 - Mohammed Abul Kashem A1 - Daniel Vyoral A1 - Des R. Richardson T1 - Proteomic analysis of hearts from frataxin knockout mice: Marked rearrangement of energy metabolism, a response to cellular stress and altered expression of proteins involved in cell structure, motility and metabolism JO - PROTEOMICS Y1 - 2008 SP - 1731 EP - 1741 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200701049 ER - TY - JOUR A1 - Dandass YS A1 - Burgess SC A1 - Lawrence M A1 - Bridges SM T1 - Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18412963&dopt=Abstract ER - TY - JOUR A1 - Bo Zhai A1 - Judit Villén A1 - Sean A. Beausoleil A1 - Julian Mintseris A1 - Steven P. Gygi T1 - Phosphoproteome Analysis of Drosophila melanogaster Embryos JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1675 EP - 1682 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700696a ER - TY - JOUR A1 - Trak-Smayra V A1 - Dargere D A1 - Noun R A1 - Albuquerque M A1 - Yaghi C A1 - Gannagé-Yared MH A1 - Bedossa P A1 - Paradis V T1 - Serum proteomic profiling of obese patients: correlation with pathology and evolution after bariatric surgery JO - Gut Y1 - 2008/04/10 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18403495&dopt=Abstract ER - TY - JOUR A1 - Annunziata CM A1 - Azad N A1 - Dhamoon AS A1 - Whiteley G A1 - Kohn EC T1 - Ovarian cancer in the proteomics era JO - Int J Gynecol Cancer Y1 - 2008 SP - 1 EP - 6 VL - 18 IS - Suppl 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18336391&dopt=Abstract ER - TY - JOUR A1 - Micallef J A1 - Gajadhar A A1 - Wiley J A1 - DeSouza LV A1 - Michael Siu KW A1 - Guha A T1 - Proteomics: present and future implications in neuro-oncology JO - Neurosurgery Y1 - 2008 SP - 539-55; discussion 539 EP - 55 VL - 62 IS - 3 UR - http://dx.doi.org/10.1227/01.neu.0000317302.85837.61 ER - TY - JOUR A1 - Karen S. Anderson A1 - Niroshan Ramachandran A1 - Jessica Wong A1 - Jacob V. Raphael A1 - Eugenie Hainsworth A1 - Gokhan Demirkan A1 - Daniel Cramer A1 - Dina Aronzon A1 - F. Stephen Hodi A1 - Lyndsay Harris A1 - Tanya Logvinenko A1 - Joshua LaBaer T1 - Application of Protein Microarrays for Multiplexed Detection of Antibodies to Tumor Antigens in Breast Cancer JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1490 EP - 1499 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700804c ER - TY - JOUR A1 - Florence Mousson A1 - Annemieke Kolkman A1 - W. W. M. Pim Pijnappel A1 - H. Th. Marc Timmers A1 - Albert J. R. Heck T1 - Quantitative Proteomics Reveals Regulation of Dynamic Components within TATA-binding Protein (TBP) Transcription Complexes JO - Mol Cell Proteomics Y1 - 2008 SP - 845 EP - 852 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/845?etoc ER - TY - JOUR A1 - Ummanni R A1 - Junker H A1 - Zimmermann U A1 - Venz S A1 - Teller S A1 - Giebel J A1 - Scharf C A1 - Woenckhaus C A1 - Dombrowski F A1 - Walther R T1 - Prohibitin identified by proteomic analysis of prostate biopsies distinguishes hyperplasia and cancer JO - Cancer Lett Y1 - 2008/03/31 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384941&dopt=Abstract ER - TY - JOUR A1 - Salzano AM A1 - D'Ambrosio C A1 - Scaloni A T1 - Mass spectrometric characterization of proteins modified by nitric oxide-derived species JO - Methods Enzymol Y1 - 2008 SP - 3 EP - 15 VL - 440 IS - UR - http://dx.doi.org/10.1016/S0076-6879(07)00801-4 ER - TY - JOUR A1 - Mazzucchelli GD A1 - Gabelica V A1 - Smargiasso N A1 - Fleron M A1 - Ashimwe W A1 - Rosu F A1 - De Pauw-Gillet MC A1 - Riou JF A1 - De Pauw E T1 - Proteome alteration induced by hTERT transfection of human fibroblast cells JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1186/1477-5956-6-12 ER - TY - JOUR A1 - Menegay M A1 - Lee D A1 - Tabbara KF A1 - Cafaro TA A1 - Urrets-Zavalia JA A1 - Serra HM A1 - Bhattacharya SK T1 - Proteomic Analysis of Climatic Keratopathy Droplets JO - Invest Ophthalmol Vis Sci Y1 - 2008/03/31 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378572&dopt=Abstract ER - TY - JOUR A1 - Ida Pucci-Minafra A1 - Patrizia Cancemi A1 - Nadia Ninfa Albanese A1 - Gianluca Di Cara A1 - Maria Rita Marabeti A1 - Antonio Marrazzo A1 - Salvatore Minafra T1 - New Protein Clustering of Breast Cancer Tissue Proteomics Using Actin Content as a Cellularity Indicator JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1412 EP - 1418 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700748m ER - TY - JOUR A1 - Keli Ou A1 - Kun Yu A1 - Djohan Kesuma A1 - Michelle Hooi A1 - Ning Huang A1 - Wei Chen A1 - Suet Ying Lee A1 - Xin Pei Goh A1 - Lay keng Tan A1 - Jia Liu A1 - Sou Yen Soon A1 - Suhaimi Bin Abdul Rashid A1 - Thomas C. Putti A1 - Hiroyuki Jikuya A1 - Tetsuo Ichikawa A1 - Osamu Nishimura A1 - Manuel Salto-Tellez A1 - Pa T1 - Novel Breast Cancer Biomarkers Identified by Integrative Proteomic and Gene Expression Mapping JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1518 EP - 1528 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700820g ER - TY - JOUR A1 - Patrícia Cuervo A1 - Elisa Cupolillo A1 - Constança Britto A1 - Luis Javier González A1 - Fernando Costa e Silva-Filho A1 - Letícia Coutinho Lopes A1 - Gilberto Barbosa Domont A1 - Jose Batista De Jesus T1 - Differential soluble protein expression between Trichomonas vaginalis isolates exhibiting low and high virulence phenotypes JO - Journal of Proteomics Y1 - 2008 SP - 109 EP - 122 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RR9015-1/1/c68107b6331c004e3531f58a0e116199 ER - TY - JOUR A1 - Carlee McClintock A1 - Vilmos Kertesz A1 - Robert L. Hettich T1 - Development of an Electrochemical Oxidation Method for Probing Higher Order Protein Structure with Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3304 EP - 3317 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac702493a ER - TY - JOUR A1 - Roman A. Zubarev A1 - Michael L. Nielsen A1 - Eva M. Fung A1 - Mikhail M. Savitski A1 - Olga Kel-Margoulis A1 - Edgar Wingender A1 - Alexander Kel T1 - Identification of dominant signaling pathways from proteomics expression data JO - Journal of Proteomics Y1 - 2008 SP - 89 EP - 96 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RM1M39-1/1/c9a2989a1c5f5763226190fffda49d1d ER - TY - JOUR A1 - Z Uuml Rbig P A1 - Mischak H T1 - Capillary electrophoresis coupled to mass spectrometry for biomarker discovery and diagnosis of kidney diseases JO - Contrib Nephrol Y1 - 2008 SP - 107 EP - 26 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401165&dopt=Abstract ER - TY - JOUR A1 - Han KQ A1 - Huang G A1 - Gao CF A1 - Wang XL A1 - Ma B A1 - Sun LQ A1 - Wei ZJ T1 - Identification of lung cancer patients by serum protein profiling using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry JO - Am J Clin Oncol Y1 - 2008 SP - 133 EP - 9 VL - 31 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18391596&dopt=Abstract ER - TY - JOUR A1 - Myers T A1 - Law W A1 - Eng JK A1 - McIntosh M T1 - Installation and use of the Computational Proteomics Analysis System (CPAS) JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/0471250953.bi1305s18 ER - TY - JOUR A1 - Yin P A1 - Wang YH A1 - Zhang SL A1 - Chu J A1 - Zhuang YP A1 - Wang ML A1 - Zhou J T1 - Isolation of soluble proteins from an industrial strain Streptomyces avermitilis in complex culture medium for two-dimensional gel electrophoresis JO - J Microbiol Methods Y1 - 2008/02/23 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378344&dopt=Abstract ER - TY - JOUR A1 - Kawanishi H A1 - Matsui Y A1 - Ito M A1 - Watanabe J A1 - Takahashi T A1 - Nishizawa K A1 - Nishiyama H A1 - Kamoto T A1 - Mikami Y A1 - Tanaka Y A1 - Jung G A1 - Akiyama H A1 - Nobumasa H A1 - Guilford P A1 - Reeve A A1 - Okuno Y A1 - Tsujimoto G A1 - Nakamura E A1 - Ogawa O T1 - Secreted CXCL1 Is a Potential Mediator and Marker of the Tumor Invasion of Bladder Cancer JO - Clin Cancer Res Y1 - 2008 SP - 2579 EP - 87 VL - 14 IS - 9 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18451219&dopt=Abstract ER - TY - JOUR A1 - Devarajan P T1 - Proteomics for the Investigation of Acute Kidney Injury JO - Contrib Nephrol Y1 - 2008 SP - 1 EP - 16 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401157&dopt=Abstract ER - TY - JOUR A1 - Karen L. Abbott A1 - Kazuhiro Aoki A1 - Jae-Min Lim A1 - Mindy Porterfield A1 - Rachelle Johnson A1 - Ruth M. O’Regan A1 - Lance Wells A1 - Michael Tiemeyer A1 - Michael Pierce T1 - Targeted Glycoproteomic Identification of Biomarkers for Human Breast Carcinoma JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1470 EP - 1480 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700792g ER - TY - JOUR A1 - Marcel P. Stoop A1 - Lennard J. Dekker A1 - Mark K. Titulaer A1 - Peter C. Burgers A1 - Peter A. E. Sillevis Smitt A1 - Theo M. Luider A1 - Rogier Q. Hintzen T1 - Multiple sclerosis-related proteins identified in cerebrospinal fluid by advanced mass spectrometry JO - PROTEOMICS Y1 - 2008 SP - 1576 EP - 1585 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700446 ER - TY - JOUR A1 - Nicola Marchetti A1 - Jacob N. Fairchild A1 - Georges Guiochon T1 - Comprehensive Off-Line, Two-Dimensional Liquid Chromatography. 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Rice A1 - Michael Permezel T1 - Proteomic Analysis of Human Cervico−Vaginal Fluid Displays Differential Protein Expression in Association with Labor Onset at Term JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1916 EP - 1921 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7006413 ER - TY - JOUR A1 - Martin SL A1 - Epperson LE A1 - Rose JC A1 - Kurtz CC A1 - Ane C A1 - Carey HV T1 - Proteomic analysis of the winter-protected phenotype of hibernating ground squirrel intestine JO - Am J Physiol Regul Integr Comp Physiol Y1 - 2008 Apr 23 SP - EP - VL - IS - UR - http://dx.doi.org/10.1152/ajpregu.00418.2007 ER - TY - JOUR A1 - Dihua Shangguan A1 - Zehui Cao A1 - Ling Meng A1 - Prabodhika Mallikaratchy A1 - Kwame Sefah A1 - Hui Wang A1 - Ying Li A1 - Weihong Tan T1 - Cell-Specific Aptamer Probes for Membrane Protein Elucidation in Cancer Cells JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2133 EP - 2139 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700894d ER - TY - JOUR A1 - Pelegrini PB A1 - Murad AM A1 - Silva LP A1 - Dos Santos RC A1 - Costa FT A1 - Tagliari PD A1 - Bloch Jr C A1 - Noronha EF A1 - Miller RN A1 - Franco OL T1 - Identification of a novel storage glycine-rich peptide from guava (Psidium guajava) seeds with activity against Gram-negative bacteria JO - Peptides Y1 - 2008/03/22 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18448201&dopt=Abstract ER - TY - JOUR A1 - Jung SM A1 - Lee K A1 - Lee JW A1 - Namkoong H A1 - Kim HK A1 - Kim S A1 - Na HR A1 - Ha SA A1 - Kim JR A1 - Ko J A1 - Kim JW T1 - Both plasma retinol-binding protein and haptoglobin precursor allele 1 in CSF: Candidate biomarkers for the progression of normal to mild cognitive impairment to Alzheimer's disease JO - Neurosci Lett Y1 - 2008/03/18 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378077&dopt=Abstract ER - TY - JOUR A1 - Thongboonkerd V T1 - Proteomics and Kidney Stone Disease JO - Contrib Nephrol Y1 - 2008 SP - 142 EP - 158 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401167&dopt=Abstract ER - TY - JOUR A1 - Perumal Vivekanandan and Om V Singh T1 - High-dimensional biology to comprehend hepatocellular carcinoma JO - Expert Review of Proteomics Y1 - 2008 SP - 45 EP - 60 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.45 ER - TY - JOUR A1 - Myriam Ferro A1 - Marianne Tardif A1 - Erwan Reguer A1 - Romain Cahuzac A1 - Christophe Bruley A1 - Thierry Vermat A1 - Estelle Nugues A1 - Marielle Vigouroux A1 - Yves Vandenbrouck A1 - Jérôme Garin A1 - Alain Viari T1 - PepLine: A Software Pipeline for High-Throughput Direct Mapping of Tandem Mass Spectrometry Data on Genomic Sequences JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1873 EP - 1883 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr070415k ER - TY - JOUR A1 - Napolitano F A1 - D'Angelo F A1 - Bimonte M A1 - Perrina V A1 - D'Ambrosio C A1 - Scaloni A A1 - Russo T A1 - Zambrano N T1 - A Differential Proteomic Approach Reveals an Evolutionary Conserved Regulation of Nme Proteins by Fe65 in C. elegans and Mouse JO - Neurochem Res Y1 - 2008/04/10 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401706&dopt=Abstract ER - TY - JOUR A1 - Peter A. DiMaggio A1 - Jr. A1 - Christodoulos A. Floudas A1 - Bingwen Lu A1 - John R. Yates A1 - III T1 - A Hybrid Method for Peptide Identification Using Integer Linear Optimization, Local Database Search, and Quadrupole Time-of-Flight or OrbiTrap Tandem Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1584 EP - 1593 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700577z ER - TY - JOUR A1 - Arthur JM A1 - Janech MG A1 - Varghese SA A1 - Almeida JS A1 - Powell TB T1 - Diagnostic and prognostic biomarkers in acute renal failure JO - Contrib Nephrol Y1 - 2008 SP - 53 EP - 64 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401161&dopt=Abstract ER - TY - JOUR A1 - Hotte NS A1 - Deyholos MK T1 - A flax fibre proteome: identification of proteins enriched in bast fibres JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18447950&dopt=Abstract ER - TY - JOUR A1 - Candiano G A1 - Musante L A1 - Petretto A A1 - Bruschi M A1 - Santucci L A1 - Urbani A A1 - Scolari F A1 - Gusmano R A1 - Carraro M A1 - Zennaro C A1 - Vincenti F A1 - Ghiggeri GM T1 - Proteomics of Plasma and Urine in Primary Nephrotic Syndrome in Children JO - Contrib Nephrol Y1 - 2008 SP - 17 EP - 28 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401158&dopt=Abstract ER - TY - JOUR A1 - Pierce A A1 - Carney L A1 - Hamza HG A1 - Griffiths JR A1 - Zhang L A1 - Whetton BA A1 - Gonzalez Sanchez MB A1 - Tamura T A1 - Sternberg D A1 - Whetton AD T1 - THOC5 spliceosome protein: a target for leukaemogenic tyrosine kinases that affects inositol lipid turnover JO - Br J Haematol Y1 - 2008/03/27 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18373705&dopt=Abstract ER - TY - JOUR A1 - Ilka Wittig A1 - Jean Velours A1 - Rosemary Stuart A1 - Hermann Schagger T1 - Characterization of Domain Interfaces in Monomeric and Dimeric ATP Synthase JO - Mol Cell Proteomics Y1 - 2008 SP - 995 EP - 1004 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/995?etoc ER - TY - JOUR A1 - Huang Q A1 - Huang Q A1 - Chen W A1 - Wang L A1 - Lin W A1 - Lin J A1 - Lin X T1 - Identification of transgelin as a potential novel biomarker for gastric adenocarcinoma based on proteomics technology JO - J Cancer Res Clin Oncol Y1 - 2008/04/30 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18446369&dopt=Abstract ER - TY - JOUR A1 - Novikova SI A1 - He F A1 - Bai J A1 - Cutrufello NJ A1 - Lidow MS A1 - Undieh AS T1 - Maternal cocaine administration in mice alters DNA methylation and gene expression in hippocampal neurons of neonatal and prepubertal offspring JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18382688&dopt=Abstract ER - TY - JOUR A1 - Trachtenberg S A1 - Dorward LM A1 - Speransky VV A1 - Jaffe H A1 - Andrews SB A1 - Leapman RD T1 - Structure of the Cytoskeleton of Spiroplasma melliferum BC3 and Its Interactions with the Cell Membrane JO - J Mol Biol Y1 - 2008/02/20 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18400234&dopt=Abstract ER - TY - JOUR A1 - Jacob AM A1 - Turck CW T1 - Detection of Post-translational Modifications by Fluorescent Staining of Two-Dimensional Gels JO - Methods Mol Biol Y1 - 2008 SP - 21 EP - 32 VL - 446 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18373247&dopt=Abstract ER - TY - JOUR A1 - Lello Zolla A1 - Sara Rinalducci A1 - Paolo Antonioli A1 - Pier Giorgio Righetti T1 - Proteomics as a Complementary Tool for Identifying Unintended Side Effects Occurring in Transgenic Maize Seeds As a Result of Genetic Modifications JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1850 EP - 1861 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr0705082 ER - TY - JOUR A1 - David M. 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Barr T1 - Ultra Performance Liquid Chromatography Isotope Dilution Tandem Mass Spectrometry for the Absolute Quantification of Proteins and Peptides JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 2688 EP - 2693 VL - 80 IS - 8 UR - http://dx.doi.org/10.1021/ac701945h ER - TY - JOUR A1 - Dean RA A1 - Smith D A1 - Overall CM T1 - Proteomic identification of cellular protease substrates using isobaric tags for relative and absolute quantification (iTRAQ) JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/0471140864.ps2118s49 ER - TY - JOUR A1 - Haike Antelmann A1 - Michael Hecker A1 - Peter Zuber T1 - Proteomic signatures uncover thiol-specific electrophile resistance mechanisms in Bacillus subtilis JO - Expert Review of Proteomics Y1 - 2008 SP - 77 EP - 90 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.77 ER - TY - JOUR A1 - Sun Tae Kim A1 - Sang Gon Kim A1 - Young Hyun Kang A1 - Yiming Wang A1 - Jae-Yean Kim A1 - Nari Yi A1 - Ju-Kon Kim A1 - Randeep Rakwal A1 - Hee-Jong Koh A1 - Kyu Young Kang T1 - Proteomics Analysis of Rice Lesion Mimic Mutant (spl1) Reveals Tightly Localized Probenazole-Induced Protein (PBZ1) in Cells Undergoing Programmed Cell Death JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1750 EP - 1760 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700878t ER - TY - JOUR A1 - Andrew Pierce A1 - Richard D. Unwin A1 - Caroline A. Evans A1 - Stephen Griffiths A1 - Louise Carney A1 - Liqun Zhang A1 - Ewa Jaworska A1 - Chia-Fang Lee A1 - David Blinco A1 - Michal J. Okoniewski A1 - Crispin J. Miller A1 - Danny A. Bitton A1 - Elaine Spooncer A1 - Anthony D. Whetton T1 - Eight-channel iTRAQ Enables Comparison of the Activity of Six Leukemogenic Tyrosine Kinases JO - Mol Cell Proteomics Y1 - 2008 SP - 853 EP - 863 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/853?etoc ER - TY - JOUR A1 - Ananthi S A1 - Chitra T A1 - Bini R A1 - Prajna NV A1 - Lalitha P A1 - Dharmalingam K T1 - Comparative analysis of the tear protein profile in mycotic keratitis patients JO - Mol Vis Y1 - 2008 SP - 500 EP - 7 VL - 14 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18385783&dopt=Abstract ER - TY - JOUR A1 - Libia Sanz A1 - José Escolano A1 - Massimo Ferretti A1 - Mirtha J. Biscoglio A1 - Elena Rivera A1 - Ernesto J. 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Lopes A1 - Laure F. Marvin-Guy A1 - Andreas Fuerholz A1 - Michael Affolter A1 - Ziad Ramadan A1 - Martin Kussmann A1 - Laurent B. Fay A1 - Gabriela E. Bergonzelli T1 - Maternal deprivation affects the neuromuscular protein profile of the rat colon in response to an acute stressor later in life JO - Journal of Proteomics Y1 - 2008 SP - 80 EP - 88 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RM7N6D-1/1/a9b7bf304a5f55ec26c9d6b368c37961 ER - TY - JOUR A1 - Feng Tao T1 - 1st NCI Annual Meeting on Clinical Proteomic Technologies for Cancer JO - Expert Review of Proteomics Y1 - 2008 SP - 17 EP - 20 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.17 ER - TY - JOUR A1 - Jianhua Zhang A1 - Jianjun Sui A1 - Chi Bun Ching A1 - Wei Ning Chen T1 - Protein profile in neuroblastoma cells incubated with S- and R-enantiomers of ibuprofen by iTRAQ-coupled 2-D LC-MS/MS analysis: Possible action of induced proteins on Alzheimer's disease JO - PROTEOMICS Y1 - 2008 SP - 1595 EP - 1607 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700556 ER - TY - JOUR A1 - Owen W. Nadeau A1 - Gerald J. Wyckoff A1 - Justin E. 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Hildebrand T1 - Identification of Breast Cancer Peptide Epitopes Presented by HLA-A*0201 JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1445 EP - 1457 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700761w ER - TY - JOUR A1 - Smith JC A1 - Figeys D T1 - Recent developments in mass spectrometry-based quantitative phosphoproteomics JO - Biochem Cell Biol Y1 - 2008 SP - 137 EP - 48 VL - 86 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18443627&dopt=Abstract ER - TY - JOUR A1 - Sergio L. S. Freire A1 - Hao Yang A1 - Aaron R. Wheeler T1 - A practical interface for microfluidics and nanoelectrospray mass spectrometry JO - ELECTROPHORESIS Y1 - 2008 SP - 1836 EP - 1843 VL - 29 IS - 9 UR - http://dx.doi.org/10.1002/elps.200700661 ER - TY - JOUR A1 - Tedesco S A1 - Doyle H A1 - Redmond G A1 - Sheehan D T1 - Gold nanoparticles and oxidative stress in Mytilus edulis JO - Mar Environ Res Y1 - 2008/02/26 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18378295&dopt=Abstract ER - TY - JOUR A1 - Xu X A1 - Wang X A1 - Liu Y A1 - Liu B A1 - Wu H A1 - Yang P T1 - Trypsin entrapped in poly(diallyldimethylammonium chloride) silica sol-gel microreactor coupled to matrix-assisted laser desorption/ionization time-of-flight mass spectrometry JO - Rapid Commun Mass Spectrom Y1 - 2008 SP - 1257 EP - 64 VL - 22 IS - 8 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18383213&dopt=Abstract ER - TY - JOUR A1 - Eden P. Go A1 - Janet Irungu A1 - Ying Zhang A1 - Dilusha S. Dalpathado A1 - Hua-Xin Liao A1 - Laura L. Sutherland A1 - S. Munir Alam A1 - Barton F. Haynes A1 - Heather Desaire T1 - Glycosylation Site-Specific Analysis of HIV Envelope Proteins (JR-FL and CON-S) Reveals Major Differences in Glycosylation Site Occupancy, Glycoform Profiles, and Antigenic Epitopesʼ Accessibility JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1660 EP - 1674 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7006957 ER - TY - JOUR A1 - Nikolai Zvonok A1 - John Williams A1 - Meghan Johnston A1 - Lakshmipathi Pandarinathan A1 - David R. Janero A1 - Jing Li A1 - Srinivasan C. Krishnan A1 - Alexandros Makriyannis T1 - Full Mass Spectrometric Characterization of Human Monoacylglycerol Lipase Generated by Large-Scale Expression and Single-Step Purification JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2158 EP - 2164 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700839z ER - TY - JOUR A1 - Kevin S. Shores A1 - D. 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Knapp T1 - Use of Peptide Analogue Diversity Library Beads for Increased Depth of Proteomic Analysis: Application to Cerebrospinal Fluid JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1922 EP - 1931 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7006889 ER - TY - JOUR A1 - Lee EY A1 - Choi DS A1 - Kim KP A1 - Gho YS T1 - Proteomics in gram-negative bacterial outer membrane vesicles JO - Mass Spectrom Rev Y1 - 2008 Apr 17 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/mas.20175 ER - TY - JOUR A1 - Yan Li A1 - Dawei Qi A1 - Chunhui Deng A1 - Pengyuan Yang A1 - Xiangmin Zhang T1 - Cerium Ion-Chelated Magnetic Silica Microspheres for Enrichment and Direct Determination of Phosphopeptides by Matrix-Assisted Laser Desorption Ionization Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1767 EP - 1777 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr070385l ER - TY - JOUR A1 - Lopez-Sanchez LM A1 - Corrales FJ A1 - De La Mata M A1 - Muntane J A1 - Rodriguez-Ariza A T1 - Detection and proteomic identification of s-nitrosated proteins in human hepatocytes JO - Methods Enzymol Y1 - 2008 SP - 273 EP - 81 VL - 440 IS - UR - http://dx.doi.org/10.1016/S0076-6879(07)00817-8 ER - TY - JOUR A1 - Cheung KJ A1 - Tilleman K A1 - Deforce D A1 - Colle I A1 - Van Vlierberghe H T1 - Proteomics in liver fibrosis is more than meets the eye JO - Eur J Gastroenterol Hepatol Y1 - 2008 SP - 450 EP - 64 VL - 20 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18403948&dopt=Abstract ER - TY - JOUR A1 - Dani D A1 - Dencher NA T1 - Native-DIGE: A new look at the mitochondrial membrane proteome JO - Biotechnol J Y1 - 2008/04/30 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18446869&dopt=Abstract ER - TY - JOUR A1 - Dupont FM T1 - Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1186/1471-2229-8-39 ER - TY - JOUR A1 - Ekegren T A1 - Hanrieder J A1 - Bergquist J T1 - Clinical perspectives of high-resolution mass spectrometry-based proteomics in neuroscience-Exemplified in amyotrophic lateral sclerosis biomarker discovery research JO - J Mass Spectrom Y1 - 2008/04/17 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18416436&dopt=Abstract ER - TY - JOUR A1 - Parikh AA A1 - Johnson JC A1 - Merchant NB T1 - Genomics and proteomics in predicting cancer outcomes JO - Surg Oncol Clin N Am Y1 - 2008 SP - 257 EP - 77 VL - 17 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18375352&dopt=Abstract ER - TY - JOUR A1 - Anne K. Callesen A1 - Werner Vach A1 - Per E. Jørgensen A1 - Søren Cold A1 - Qihua Tan A1 - René dePont Christensen A1 - Ole Mogensen A1 - Torben A. Kruse A1 - Ole N. Jensen A1 - Jonna S. Madsen T1 - Combined Experimental and Statistical Strategy for Mass Spectrometry Based Serum Protein Profiling for Diagnosis of Breast Cancer: A Case-Control Study JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1419 EP - 1426 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7007576 ER - TY - JOUR A1 - KiBeom Lee A1 - Hong-Gu Lee A1 - KyungBae Pi A1 - Yun-Jaie Choi T1 - The effect of low pH on protein expression by the probiotic bacterium Lactobacillus reuteri JO - PROTEOMICS Y1 - 2008 SP - 1624 EP - 1630 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700663 ER - TY - JOUR A1 - Valkenborg D A1 - Van Sanden S A1 - Lin D A1 - Kasim A A1 - Zhu Q A1 - Haldermans P A1 - Jansen I A1 - Shkedy Z A1 - Burzykowski T T1 - A cross-validation study to select a classification procedure for clinical diagnosis based on proteomic mass spectrometry JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384267&dopt=Abstract ER - TY - JOUR A1 - Jean Breton A1 - Matthew C. Gage A1 - Alastair W. Hay A1 - Jeffrey N. Keen A1 - Christopher P. Wild A1 - Clare Donnellan A1 - John B. C. Findlay A1 - Laura J. Hardie T1 - Proteomic Screening of a Cell Line Model of Esophageal Carcinogenesis Identifies Cathepsin D and Aldo-Keto Reductase 1C2 and 1B10 Dysregulation in Barrett’s Esophagus and Esophageal Adenocarcinoma JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1953 EP - 1962 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7007835 ER - TY - JOUR A1 - Shui-Tein Chen A1 - Tai-Long Pan A1 - Hsueh-Fen Juan A1 - Tai-Yuan Chen A1 - Yih-Shyan Lin A1 - Chun-Ming Huang T1 - Breast Tumor Microenvironment: Proteomics Highlights the Treatments Targeting Secretome JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1379 EP - 1387 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700745n ER - TY - JOUR A1 - Dhimankrishna Ghosh A1 - Ron C. Beavis A1 - John A. Wilkins T1 - The Identification and Characterization of Membranome Components JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1572 EP - 1583 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr070509u ER - TY - JOUR A1 - Kangueane P A1 - Sakharkar MK T1 - HLA-peptide binding prediction using structural and modeling principles JO - Methods Mol Biol Y1 - 2007 SP - 293 EP - 9 VL - 409 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18450009&dopt=Abstract ER - TY - JOUR A1 - Ishino Y A1 - Taniguchi H T1 - An a posteriori calibration method for improving protein identification accuracy in proteomics using electrospray ionization time-of-flight tandem mass spectrometry JO - Rapid Commun Mass Spectrom Y1 - 2008 SP - 1335 EP - 8 VL - 22 IS - 8 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18383205&dopt=Abstract ER - TY - JOUR A1 - Maria Marcantonio A1 - Matthias Trost A1 - Mathieu Courcelles A1 - Michel Desjardins A1 - Pierre Thibault T1 - Combined Enzymatic and Data Mining Approaches for Comprehensive Phosphoproteome Analyses: Application to Cell Signaling Events of Interferon-{gamma}-Stimulated Macrophages JO - Mol Cell Proteomics Y1 - 2008 SP - 645 EP - 660 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/645?etoc ER - TY - JOUR A1 - Casati P A1 - Campi M A1 - Chu F A1 - Suzuki N A1 - Maltby D A1 - Guan S A1 - Burlingame AL A1 - Walbot V T1 - Histone Acetylation and Chromatin Remodeling Are Required for UV-B-Dependent Transcriptional Activation of Regulated Genes in Maize JO - Plant Cell Y1 - 2008/04/8 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18398050&dopt=Abstract ER - TY - JOUR A1 - Perera CN A1 - Spalding HS A1 - Mohammed SI A1 - Camarillo IG T1 - Identification of Proteins Secreted from Leptin Stimulated MCF-7 Breast Cancer Cells: A Dual proteomic Approach JO - Exp Biol Med (Maywood) Y1 - 2008/04/11 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18408141&dopt=Abstract ER - TY - JOUR A1 - Xiao X. Han A1 - Hui Y. Jia A1 - Yan F. Wang A1 - Zhi C. Lu A1 - Chun X. Wang A1 - Wei Q. Xu A1 - Bing Zhao A1 - Yukihiro Ozaki T1 - Analytical Technique for Label-Free Multi-Protein Detection Based on Western Blot and Surface-Enhanced Raman Scattering JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 2799 EP - 2804 VL - 80 IS - 8 UR - http://dx.doi.org/10.1021/ac702390u ER - TY - JOUR A1 - Quanzhou Luo A1 - Ye Gu A1 - Shiaw-Lin Wu A1 - Tomas Rejtar A1 - Barry L. Karger T1 - Two-dimensional strong cation exchange/porous layer open tubular/mass spectrometry for ultratrace proteomic analysis using a 10 ?m id poly(styrene- divinylbenzene) porous layer open tubular column with an on-line triphasic trapping column JO - ELECTROPHORESIS Y1 - 2008 SP - 1604 EP - 1611 VL - 29 IS - 8 UR - http://dx.doi.org/10.1002/elps.200700741 ER - TY - JOUR A1 - Buhimschi IA A1 - Zhao G A1 - Rosenberg VA A1 - Abdel-Razeq S A1 - Thung S A1 - Buhimschi CS T1 - Multidimensional proteomics analysis of amniotic fluid to provide insight into the mechanisms of idiopathic preterm birth JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1371/journal.pone.0002049 ER - TY - JOUR A1 - Wilson R A1 - Belluoccio D A1 - Bateman JF T1 - Proteomic analysis of cartilage proteins JO - Methods Y1 - 2008 SP - 22 EP - 31 VL - 45 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18442702&dopt=Abstract ER - TY - JOUR A1 - Hamrita B A1 - Chahed K A1 - Kabbage M A1 - Guillier CL A1 - Trimeche M A1 - Chaieb A A1 - Chouchane L T1 - Identification of tumor antigens that elicit a humoral immune response in breast cancer patients' sera by serological proteome analysis (SERPA) JO - Clin Chim Acta Y1 - 2008 Mar 27 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.cca.2008.03.017 ER - TY - JOUR A1 - Sharmini Alagaratnam A1 - Bart J. A. Mertens A1 - Johannes C. Dalebout A1 - André M. Deelder A1 - Gert-Jan B. van Ommen A1 - Johan T. den Dunnen A1 - Peter A. C. 't Hoen T1 - Serum protein profiling in mice: Identification of Factor XIIIa as a potential biomarker for muscular dystrophy JO - PROTEOMICS Y1 - 2008 SP - 1552 EP - 1563 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700857 ER - TY - JOUR A1 - Hubert Hondermarck A1 - Christophe Tastet A1 - Ikram El Yazidi-Belkoura A1 - Robert-Alain Toillon A1 - Xuefen Le Bourhis T1 - Proteomics of Breast Cancer: The Quest for Markers and Therapeutic Targets JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1403 EP - 1411 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700870c ER - TY - JOUR A1 - Jia Liu A1 - Xia Liu A1 - Willy R. G. Baeyens A1 - Joris R. Delanghe A1 - Jin Ouyang T1 - A Novel Probe Au(III) for Chemiluminescent Image Detection of Protein Blots on Nitrocellulose Membranes JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1884 EP - 1890 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700616u ER - TY - JOUR A1 - Liao WL A1 - Turko IV T1 - Strategy combining separation of isotope-labeled unfolded proteins and matrix-assisted laser desorption/ionization mass spectrometry analysis enables quantification of a wide range of serum proteins JO - Anal Biochem Y1 - 2008/03/15 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384735&dopt=Abstract ER - TY - JOUR A1 - Chora S A1 - McDonagh B A1 - Sheehan D A1 - Starita-Geribaldi M A1 - Roméo M A1 - Bebianno MJ T1 - Ubiquitination and carbonylation as markers of oxidative-stress in Ruditapes decussatus JO - Mar Environ Res Y1 - 2008/02/26 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18403005&dopt=Abstract ER - TY - JOUR A1 - Carpentier SC A1 - Panis B A1 - Vertommen A A1 - Swennen R A1 - Sergeant K A1 - Renaut J A1 - Laukens K A1 - Witters E A1 - Samyn B A1 - Devreese B T1 - Proteome analysis of non-model plants: A challenging but powerful approach JO - Mass Spectrom Rev Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18381744&dopt=Abstract ER - TY - JOUR A1 - Lu Tie A1 - Jian-Zhao Zhang A1 - Yan-Hua Lin A1 - Tian-Hao Su A1 - Yu-Hua Li A1 - Hong-Li Wu A1 - You-Yi Zhang A1 - He-Ming Yu A1 - Xue-Jun Li T1 - Epinephrine Increases Phosphorylation of MAP-2c in Rat Pheochromocytoma Cells (PC12 Cells) via a Protein Kinase C- and Mitogen Activated Protein Kinase-Dependent Mechanism JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1704 EP - 1711 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700711s ER - TY - JOUR A1 - Sharon J. 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Hanash T1 - Plasma Proteome Profiling of a Mouse Model of Breast Cancer Identifies a Set of Up-Regulated Proteins in Common with Human Breast Cancer Cells JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1481 EP - 1489 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7007994 ER - TY - JOUR A1 - Decanini A A1 - Karunadharma PR A1 - Nordgaard CL A1 - Feng X A1 - Olsen TW A1 - Ferrington DA T1 - Human retinal pigment epithelium proteome changes in early diabetes JO - Diabetologia Y1 - 2008/04/15 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18414830&dopt=Abstract ER - TY - JOUR A1 - Petr ?otkovský A1 - Martin Hubálek A1 - Lenka Hernychová A1 - Petr Novák A1 - Marie Havranová A1 - Iva ?etinová A1 - Andrea Kitanovi?ová A1 - Martin Fuchs A1 - Ji?í Stulík A1 - Ludmila Tu?ková T1 - Proteomic analysis of wheat proteins recognized by IgE antibodies of allergic patients JO - PROTEOMICS Y1 - 2008 SP - 1677 EP - 1691 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700347 ER - TY - JOUR A1 - Erik Bjorling A1 - Cecilia Lindskog A1 - Per Oksvold A1 - Jerker Linne A1 - Caroline Kampf,Sophia Hober A1 - Mathias Uhlen A1 - Fredrik Ponten T1 - A Web-based Tool for in Silico Biomarker Discovery Based on Tissue-specific Protein Profiles in Normal and Cancer Tissues JO - Mol Cell Proteomics Y1 - 2008 SP - 825 EP - 844 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/825?etoc ER - TY - JOUR A1 - Gao M A1 - Zhang X T1 - Multi-dimensional capillary electrophoresis and chromatography for proteomic analysis JO - Methods Mol Biol Y1 - 2008 SP - 783 EP - 801 VL - 384 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18392595&dopt=Abstract ER - TY - JOUR A1 - Jun Zhang A1 - Xiaohai Li A1 - Michael Mueller A1 - Yueju Wang A1 - Chenggong Zong A1 - Ning Deng A1 - Thomas M. Vondriska A1 - David A. Liem A1 - Jeong-In Yang A1 - Paavo Korge A1 - Henry Honda A1 - James N. Weiss A1 - Rolf Apweiler A1 - Peipei Ping T1 - Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria JO - PROTEOMICS Y1 - 2008 SP - 1564 EP - 1575 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700851 ER - TY - JOUR A1 - Kong FM A1 - Ao X A1 - Wang L A1 - Lawrence TS T1 - The use of blood biomarkers to predict radiation lung toxicity: a potential strategy to individualize thoracic radiation therapy JO - Cancer Control Y1 - 2008 SP - 140 EP - 50 VL - 15 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18376381&dopt=Abstract ER - TY - JOUR A1 - Leduc RD A1 - Kelleher NL T1 - Using ProSight PTM and related tools for targeted protein identification and characterization with high mass accuracy tandem MS data JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/0471250953.bi1306s19 ER - TY - JOUR A1 - Gupta N A1 - Benhamida J A1 - Bhargava V A1 - Goodman D A1 - Kain E A1 - Kerman I A1 - Nguyen N A1 - Ollikainen N A1 - Rodriguez J A1 - Wang J A1 - Lipton MS A1 - Romine M A1 - Bafna V A1 - Smith RD A1 - Pevzner PA T1 - Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes JO - Genome Res Y1 - 2008 Apr 21 SP - EP - VL - IS - UR - http://dx.doi.org/10.1101/gr.074344.107 ER - TY - JOUR A1 - Lacerda CM A1 - Xin L A1 - Rogers I A1 - Reardon KF T1 - Analysis of iTRAQ data using Mascot and Peaks quantification algorithms JO - Brief Funct Genomic Proteomic Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18390580&dopt=Abstract ER - TY - JOUR A1 - Gramolini A A1 - Peterman S A1 - Kislinger T T1 - Mass Spectrometry-based Proteomics: A Useful Tool for Biomarker Discovery? 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FitzGerald A1 - Tilo Grosser T1 - Analysis of the Zebrafish Proteome during Embryonic Development JO - Mol Cell Proteomics Y1 - 2008 SP - 981 EP - 994 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/981?etoc ER - TY - JOUR A1 - Palkar PS A1 - Kakhniashvili DG A1 - Goodman SR A1 - Mehendale HM T1 - The rat red blood cell proteome is altered by priming with 2-butoxyethanol JO - Toxicol Appl Pharmacol Y1 - 2008 Mar 15 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.taap.2008.03.005 ER - TY - JOUR A1 - Wei J A1 - Xu G A1 - Wu M A1 - Zhang Y A1 - Li Q A1 - Liu P A1 - Zhu T A1 - Song A A1 - Zhao L A1 - Han Z A1 - Chen G A1 - Wang S A1 - Meng L A1 - Zhou J A1 - Lu Y A1 - Wang S A1 - Ma D T1 - Overexpression of vimentin contributes to prostate cancer invasion and metastasis via src regulation JO - Anticancer Res Y1 - 2008 SP - 327 EP - 34 VL - 28 IS - 1A UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18383865&dopt=Abstract ER - TY - JOUR A1 - Pandhal J A1 - Wright PC A1 - Biggs CA T1 - Proteomics with a pinch of salt: a cyanobacterial perspective JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18412952&dopt=Abstract ER - TY - JOUR A1 - Kiyotaka Horie A1 - Randeep Rakwal A1 - Misato Hirano A1 - Junko Shibato A1 - Hyung Wook Nam A1 - Yu Sam Kim A1 - Yoshiaki Kouzuma A1 - Ganesh Kumar Agrawal A1 - Yoshinori Masuo A1 - Masami Yonekura T1 - Proteomics of Two Cultivated Mushrooms Sparassis crispa and Hericium erinaceum Provides Insight into their Numerous Functional Protein Components and Diversity JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1819 EP - 1835 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr070369o ER - TY - JOUR A1 - Rossing K A1 - Mischak H A1 - Dakna M A1 - Zürbig P A1 - Novak J A1 - Julian BA A1 - Good DM A1 - Coon JJ A1 - Tarnow L A1 - Rossing P T1 - Urinary Proteomics in Diabetes and CKD JO - J Am Soc Nephrol Y1 - 2008/04/30 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18448586&dopt=Abstract ER - TY - JOUR A1 - Jacob A. Galan A1 - Minjie Guo A1 - Elda E. Sanchez A1 - Esteban Cantu A1 - Alexis Rodriguez-Acosta A1 - John C. Perez A1 - W. Andy Tao T1 - Quantitative Analysis of Snake Venoms Using Soluble Polymer-based Isotope Labeling JO - Mol Cell Proteomics Y1 - 2008 SP - 785 EP - 799 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/785?etoc ER - TY - JOUR A1 - Grantzdorffer I A1 - Carl-McGrath S A1 - Ebert MP A1 - Rocken C T1 - Proteomics of pancreatic cancer JO - Pancreas Y1 - 2008 SP - 329 EP - 36 VL - 36 IS - 4 UR - http://dx.doi.org/10.1097/MPA.0b013e31815cc452 ER - TY - JOUR A1 - Mark J. Raftery T1 - Enrichment by Organomercurial Agarose and Identification of Cys-Containing Peptides from Yeast Cell Lysates JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3334 EP - 3341 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac702539q ER - TY - JOUR A1 - Sanz-Medel A T1 - Heteroatom(isotope)-tagged proteomics via ICP-MS: screening and quantification of proteins and their post-translational modifications JO - Anal Bioanal Chem Y1 - 2008 Apr 22 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s00216-008-2083-z ER - TY - JOUR A1 - Ramos Y A1 - García Y A1 - Llopiz A A1 - Castellanos-Serra L T1 - Selectivity of bacterial proteome fractionation based on differential solubility: A mass spectrometry evaluation JO - Anal Biochem Y1 - 2008/03/22 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384741&dopt=Abstract ER - TY - JOUR A1 - Christina I. Orazine A1 - Marina Hincapie A1 - William S. Hancock A1 - Maureen Hattersley A1 - Jeff H. Hanke T1 - A Proteomic Analysis of the Plasma Glycoproteins of a MCF-7 Mouse Xenograft: A Model System for the Detection of Tumor Markers JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1542 EP - 1554 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7008516 ER - TY - JOUR A1 - Ozlem Onder A1 - Serdar Turkarslan A1 - David Sun A1 - Fevzi Daldal T1 - Overproduction or Absence of the Periplasmic Protease DegP Severely Compromises Bacterial Growth in the Absence of the Dithiol: Disulfide Oxidoreductase DsbA JO - Mol Cell Proteomics Y1 - 2008 SP - 875 EP - 890 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/875?etoc ER - TY - JOUR A1 - Verano-Braga T A1 - Rocha-Resende C A1 - Silva DM A1 - Ianzer D A1 - Martin-Eauclaire MF A1 - Bougis PE A1 - de Lima ME A1 - Santos RA A1 - Pimenta AM T1 - Tityus serrulatus Hypotensins: A new family of peptides from scorpion venom JO - Biochem Biophys Res Commun Y1 - 2008/04/26 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18445483&dopt=Abstract ER - TY - JOUR A1 - Medzihradszky KF T1 - Characterization of Site-specific N-Glycosylation JO - Methods Mol Biol Y1 - 2008 SP - 293 EP - 316 VL - 446 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18373266&dopt=Abstract ER - TY - JOUR A1 - Josic D A1 - Clifton JG A1 - Kovac S A1 - Hixson DC T1 - Membrane proteins as diagnostic biomarkers and targets for new therapies JO - Curr Opin Mol Ther Y1 - 2008 SP - 116 EP - 23 VL - 10 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18386223&dopt=Abstract ER - TY - JOUR A1 - Gilany K A1 - Van Elzen R A1 - Mous K A1 - Coen E A1 - Van Dongen W A1 - Van Damme S A1 - Gevaert K A1 - Timmerman E A1 - Vandekerckhove J A1 - Dewilde S A1 - Van Ostade X A1 - Moens L T1 - The proteome of the human neuroblastoma cell line SH-SY5Y: An enlarged proteome JO - Biochim Biophys Acta Y1 - 2008/03/19 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18402783&dopt=Abstract ER - TY - JOUR A1 - Deutsch EW A1 - Lam H A1 - Aebersold R T1 - PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows JO - EMBO Rep Y1 - 2008 SP - 429 EP - 34 VL - 9 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18451766&dopt=Abstract ER - TY - JOUR A1 - Dean E. McNulty and Roland S. Annan T1 - Hydrophilic Interaction Chromatography Reduces the Complexity of the Phosphoproteome and Improves Global Phosphopeptide Isolation and Detection JO - Mol Cell Proteomics Y1 - 2008 SP - 971 EP - 980 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/971?etoc ER - TY - JOUR A1 - Baerenfaller K A1 - Grossmann J A1 - Grobei MA A1 - Hull R A1 - Hirsch-Hoffmann M A1 - Yalovsky S A1 - Zimmermann P A1 - Grossniklaus U A1 - Gruissem W A1 - Baginsky S T1 - Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics JO - Science Y1 - 2008 Apr 24 SP - EP - VL - IS - UR - http://dx.doi.org/10.1126/science.1157956 ER - TY - JOUR A1 - Morten B. Trelle and Ole N. Jensen T1 - Utility of Immonium Ions for Assignment of -N-Acetyllysine-Containing Peptides by Tandem Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3422 EP - 3430 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac800005n ER - TY - JOUR A1 - Yang Y A1 - Liu S A1 - Qin Z A1 - Cui Y A1 - Qin Y A1 - Bai S T1 - Alteration of cystatin C levels in cerebrospinal fluid of patients with Guillain-Barré Syndrome by a proteomical approach JO - Mol Biol Rep Y1 - 2008/03/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18373213&dopt=Abstract ER - TY - JOUR A1 - Li X A1 - Tang S A1 - Huang H A1 - Yang L A1 - Liu J A1 - Zhuang Z T1 - Induction of a cell-survival adaptive response in MRC-5 cells by hydroquinone JO - Mutat Res Y1 - 2008/03/10 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18387334&dopt=Abstract ER - TY - JOUR A1 - Ajay Matta A1 - Leroi V. DeSouza A1 - Nootan Kumar Shukla A1 - Siddhartha D. Gupta A1 - Ranju Ralhan A1 - K. W. Michael Siu T1 - Prognostic Significance of Head-and-Neck Cancer Biomarkers Previously Discovered and Identified Using iTRAQ-Labeling and Multidimensional Liquid Chromatography−Tandem Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2078 EP - 2087 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr7007797 ER - TY - JOUR A1 - Kochanek PM A1 - Berger RP A1 - Bayr H A1 - Wagner AK A1 - Jenkins LW A1 - Clark RS T1 - Biomarkers of primary and evolving damage in traumatic and ischemic brain injury: diagnosis, prognosis, probing mechanisms, and therapeutic decision making JO - Curr Opin Crit Care Y1 - 2008 SP - 135 EP - 141 VL - 14 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18388674&dopt=Abstract ER - TY - JOUR A1 - Jonathan C. Trinidad A1 - Agnes Thalhammer A1 - Christian G. Specht A1 - Aenoch J.Lynn A1 - Peter R. Baker A1 - Ralf Schoepfer A1 - Alma L. Burlingame T1 - Quantitative Analysis of Synaptic Phosphorylation and Protein Expression JO - Mol Cell Proteomics Y1 - 2008 SP - 684 EP - 696 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/684?etoc ER - TY - JOUR A1 - Ki Hun Kim A1 - Dukjin Kang A1 - Hyun Min Koo A1 - Myeong Hee Moon T1 - Molecular mass sorting of proteome using hollow fiber flow field-flow fractionation for proteomics JO - Journal of Proteomics Y1 - 2008 SP - 123 EP - 131 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RTM37J-1/1/a21a2d67b1c63af5fceaafd0f35d69aa ER - TY - JOUR A1 - Lefranc MP T1 - IMGT, the international ImMunoGeneTics information system for Immunoinformatics. 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Foster T1 - Identification of cognate host targets and specific ubiquitylation sites on the Salmonella SPI-1 effector SopB/SigD JO - Journal of Proteomics Y1 - 2008 SP - 97 EP - 108 VL - 71 IS - 1 UR - http://www.sciencedirect.com/science/article/B8JDC-4RS43TH-1/1/4e31b44b1f0ee9d5473a95e5dda4ee78 ER - TY - JOUR A1 - Grimsrud PA A1 - Xie H A1 - Griffin TJ A1 - Bernlohr DA T1 - Oxidative stress and covalent modification of protein with bioactive aldehydes JO - J Biol Chem Y1 - 2008/04/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18445586&dopt=Abstract ER - TY - JOUR A1 - Tsui-Chin Huang A1 - Hsin-Yi Chang A1 - Chun-Hua Hsu A1 - Wen-Hung Kuo A1 - King-Jen Chang A1 - Hsueh-Fen Juan T1 - Targeting Therapy for Breast Carcinoma by ATP Synthase Inhibitor Aurovertin B JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1433 EP - 1444 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700742h ER - TY - JOUR A1 - Anisa Elhamili A1 - Magnus Wetterhall A1 - Björn Arvidsson A1 - Roberto Sebastiano A1 - Pier Giorgio Righetti A1 - Jonas Bergquist T1 - Rapid capillary electrophoresis time-of-flight mass spectrometry separations of peptides and proteins using a monoquaternarized piperazine compound (M7C4I) for capillary coatings JO - ELECTROPHORESIS Y1 - 2008 SP - 1619 EP - 1625 VL - 29 IS - 8 UR - http://dx.doi.org/10.1002/elps.200700737 ER - TY - JOUR A1 - Uriarte SM A1 - Powell DW A1 - Luerman GC A1 - Merchant ML A1 - Cummins TD A1 - Jog NR A1 - Ward RA A1 - McLeish KR T1 - Comparison of proteins expressed on secretory vesicle membranes and plasma membranes of human neutrophils JO - J Immunol Y1 - 2008 SP - 5575 EP - 81 VL - 180 IS - 8 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18390742&dopt=Abstract ER - TY - JOUR A1 - Thongboonkerd V T1 - Searching for Novel Biomarkers and NewTherapeutic Targets of Diabetic Nephropathy Using Proteomics Approaches JO - Contrib Nephrol Y1 - 2008 SP - 37 EP - 52 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401160&dopt=Abstract ER - TY - JOUR A1 - Hirabayashi J T1 - Concept, strategy and realization of lectin-based glycan profiling JO - J Biochem Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18390573&dopt=Abstract ER - TY - JOUR A1 - Tine E. Thingholm A1 - Ole N. Jensen A1 - Phillip J. Robinson A1 - Martin R. Larsen T1 - SIMAC (Sequential Elution from IMAC), a Phosphoproteomics Strategy for the Rapid Separation of Monophosphorylated from Multiply Phosphorylated Peptides JO - Mol Cell Proteomics Y1 - 2008 SP - 661 EP - 671 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/661?etoc ER - TY - JOUR A1 - Yang M A1 - Lee HS A1 - Pyo MY T1 - Proteomic biomarkers for prenatal bisphenol A: Exposure in mouse immune organs JO - Environ Mol Mutagen Y1 - 2008/04/16 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18418863&dopt=Abstract ER - TY - JOUR A1 - Liu C A1 - Chen Y A1 - Yu X A1 - Jin C A1 - Xu J A1 - Long J A1 - Ni Q A1 - Fu D A1 - Jin H A1 - Bai C T1 - Proteomic analysis of differential proteins in pancreatic carcinomas: effects of MBD1 knock-down by stable RNA interference JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18445260&dopt=Abstract ER - TY - JOUR A1 - Paul Denny A1 - Fred K. Hagen A1 - Markus Hardt A1 - Lujian Liao A1 - Weihong Yan A1 - Martha Arellanno A1 - Sara Bassilian A1 - Gurrinder S. Bedi A1 - Pinmannee Boontheung A1 - Daniel Cociorva A1 - Claire M. Delahunty A1 - Trish Denny A1 - Jason Dunsmore A1 - Kym F. Faull A1 - Joyce Gilligan A1 - Mireya Gonzalez- T1 - The Proteomes of Human Parotid and Submandibular/Sublingual Gland Salivas Collected as the Ductal Secretions JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1994 EP - 2006 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700764j ER - TY - JOUR A1 - Qibin Zhang A1 - Ning Tang A1 - Athena A. Schepmoes A1 - Lawrence S. Phillips A1 - Richard D. Smith A1 - Thomas O. Metz T1 - Proteomic Profiling of Nonenzymatically Glycated Proteins in Human Plasma and Erythrocyte Membranes JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2025 EP - 2032 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700763r ER - TY - JOUR A1 - Matthew L Cowan and Jaime Vera T1 - Proteomics: Advances in Biomarker Discovery JO - Expert Review of Proteomics Y1 - 2008 SP - 21 EP - 23 VL - 5 IS - 1 UR - http://dx.doi.org/10.1586/14789450.5.1.21 ER - TY - JOUR A1 - Cristian I. Ruse A1 - Daniel B. McClatchy A1 - Bingwen Lu A1 - Daniel Cociorva A1 - Akira Motoyama A1 - Sung Kyu Park A1 - John R. Yates III T1 - Motif-Specific Sampling of Phosphoproteomes JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2140 EP - 2150 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr800147u ER - TY - JOUR A1 - Guo Y A1 - Yu L A1 - Wen Z A1 - Li M T1 - Using support vector machine combined with auto covariance to predict protein-protein interactions from protein sequences JO - Nucleic Acids Res Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18390576&dopt=Abstract ER - TY - JOUR A1 - Becker M A1 - Nothwang HG A1 - Friauf E T1 - Different protein profiles in inferior colliculus and cerebellum: A comparative proteomic study JO - Neuroscience Y1 - 2008/02/20 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18400408&dopt=Abstract ER - TY - JOUR A1 - Gamblin DP A1 - van Kasteren SI A1 - Chalker JM A1 - Davis BG T1 - Chemical approaches to mapping the function of post-translational modifications JO - FEBS J Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384382&dopt=Abstract ER - TY - JOUR A1 - Evi Croes A1 - Kurt Gebruers A1 - Johan Robben A1 - Jean-Paul Noben A1 - Bart Samyn A1 - Griet Debyser A1 - Jozef Van Beeumen A1 - Jan A. Delcour A1 - Christophe M. Courtin T1 - Variability of polymorphic families of three types of xylanase inhibitors in the wheat grain proteome JO - PROTEOMICS Y1 - 2008 SP - 1692 EP - 1705 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200700813 ER - TY - JOUR A1 - Craven RA A1 - Banks RE T1 - Understanding and managing renal cell carcinoma: can proteomic studies contribute to clinical practice? JO - Contrib Nephrol Y1 - 2008 SP - 88 EP - 106 VL - 160 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18401164&dopt=Abstract ER - TY - JOUR A1 - Lifeng Peng A1 - Pisana Rawson A1 - Danyl McLauchlan A1 - Klaus Lehnert A1 - Russell Snell A1 - T. William Jordan T1 - Proteomic Analysis of Microsomes from Lactating Bovine Mammary Gland JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1427 EP - 1432 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700819b ER - TY - JOUR A1 - Chan CM A1 - Wong SC A1 - Lam MY A1 - Hui EP A1 - Chan JK A1 - Lo ES A1 - Cheuk W A1 - Wong MC A1 - Tsao SW A1 - Chan AT T1 - Proteomic Comparison of Nasopharyngeal Cancer Cell Lines C666-1 and NP69 Identifies Down-Regulation of Annexin II and beta(2)-Tubulin for Nasopharyngeal Carcinoma JO - Arch Pathol Lab Med Y1 - 2008 SP - 675 EP - 83 VL - 132 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18384219&dopt=Abstract ER - TY - JOUR A1 - Lustgarten JL A1 - Kimmel C A1 - Ryberg H A1 - Hogan W T1 - EPO-KB: A searchable knowledge base of biomarker to protein links JO - Bioinformatics Y1 - 2008/04/9 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18400772&dopt=Abstract ER - TY - JOUR A1 - Chi Chun Wong A1 - Ying Wang A1 - Ka-Wing Cheng A1 - Jen-Fu Chiu A1 - Qing-Yu He A1 - Feng Chen T1 - Comparative Proteomic Analysis of Indioside D-Triggered Cell Death in HeLa Cells JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2050 EP - 2058 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr800019k ER - TY - JOUR A1 - Hanash SM A1 - Pitteri SJ A1 - Faca VM T1 - Mining the plasma proteome for cancer biomarkers JO - Nature Y1 - 2008 SP - 571 EP - 9 VL - 452 IS - 7187 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18385731&dopt=Abstract ER - TY - JOUR A1 - Motani K A1 - Tabata K A1 - Kimura Y A1 - Okano S A1 - Shibata Y A1 - Abiko Y A1 - Nagai H A1 - Akihisa T A1 - Suzuki T T1 - Proteomic Analysis of Apoptosis Induced by Xanthoangelol, a Major Constituent of Angelica keiskei, in Neuroblastoma JO - Biol Pharm Bull Y1 - 2008 SP - 618 EP - 26 VL - 31 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18379052&dopt=Abstract ER - TY - JOUR A1 - van Kampen JJ A1 - Burgers PC A1 - de Groot R A1 - Osterhaus AD A1 - Reedijk ML A1 - Verschuren EJ A1 - Gruters RA A1 - Luider TM T1 - Quantitative Analysis of HIV-1 Protease Inhibitors in Cell Lysates Using MALDI-FTICR Mass Spectrometry JO - Anal Chem Y1 - 2008/04/8 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18393531&dopt=Abstract ER - TY - JOUR A1 - Hongling Han A1 - Yu Xia A1 - Min Yang A1 - Scott A. McLuckey T1 - Rapidly Alternating Transmission Mode Electron-Transfer Dissociation and Collisional Activation for the Characterization of Polypeptide Ions JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3492 EP - 3497 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac7022734 ER - TY - JOUR A1 - Yinghua Qiu A1 - Tasneem H. Patwa A1 - Li Xu A1 - Kerby Shedden A1 - David E. Misek A1 - Missy Tuck A1 - Gracie Jin A1 - Mack T. Ruffin A1 - Danielle K. Turgeon A1 - Sapna Synal A1 - Robert Bresalier A1 - Norman Marcon A1 - Dean E. Brenner A1 - David M. Lubman T1 - Plasma Glycoprotein Profiling for Colorectal Cancer Biomarker Identification by Lectin Glycoarray and Lectin Blot JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1693 EP - 1703 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr700706s ER - TY - JOUR A1 - Alessio Ceroni A1 - Kai Maass A1 - Hildegard Geyer A1 - Rudolf Geyer A1 - Anne Dell A1 - Stuart M. Haslam T1 - GlycoWorkbench: A Tool for the Computer-Assisted Annotation of Mass Spectra of Glycans JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1650 EP - 1659 VL - 7 IS - 04 UR - http://dx.doi.org/10.1021/pr7008252 ER - TY - JOUR A1 - Chongle Pan A1 - Yasuhiro Oda A1 - Patricia K. Lankford A1 - Bing Zhang A1 - Nagiza F. Samatova A1 - Dale A. Pelletier A1 - Caroline S. Harwood A1 - Robert L. Hettich T1 - Characterization of Anaerobic Catabolism of p-Coumarate in Rhodopseudomonas palustris by Integrating Transcriptomics and Quantitative Proteomics JO - Mol Cell Proteomics Y1 - 2008 SP - 938 EP - 948 VL - 7 IS - 5 UR - http://www.mcponline.org/cgi/content/abstract/7/5/938?etoc ER - TY - JOUR A1 - Michael J. Roth A1 - Bryan A. Parks A1 - Jonathan T. Ferguson A1 - Michael T. Boyne II A1 - Neil L. Kelleher T1 - "Proteotyping": Population Proteomics of Human Leukocytes Using Top Down Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 2857 EP - 2866 VL - 80 IS - 8 UR - http://dx.doi.org/10.1021/ac800141g ER - TY - JOUR A1 - Bidle KA A1 - Kirkland PA A1 - Nannen JL A1 - Maupin-Furlow JA T1 - Proteomic analysis of Haloferax volcanii reveals salinity-mediated regulation of the stress response protein PspA JO - Microbiology Y1 - 2008 SP - 1436 EP - 43 VL - 154 IS - Pt 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18451052&dopt=Abstract ER - TY - JOUR A1 - Nicolas J. Hauser A1 - Hongling Han A1 - Scott A. McLuckey A1 - Franco Basile T1 - Electron Transfer Dissociation of Peptides Generated by Microwave D-Cleavage Digestion of Proteins JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 1867 EP - 1872 VL - 7 IS - 05 UR - http://dx.doi.org/10.1021/pr700671z ER - TY - JOUR A1 - Elena V. Romanova A1 - Stanislav S. Rubakhin A1 - Jonathan V. Sweedler T1 - One-Step Sampling, Extraction, and Storage Protocol for Peptidomics Using Dihydroxybenzoic Acid JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3379 EP - 3386 VL - 80 IS - 9 UR - http://dx.doi.org/10.1021/ac7026047 ER - TY - JOUR A1 - Reddy CS A1 - Holzgreve W A1 - Hahn S T1 - Detection of New Screening Markers for Fetal Aneuploidies in Maternal Plasma: A Proteomic Approach JO - Methods Mol Biol Y1 - 2008 SP - 311 EP - 326 VL - 444 IS - UR - http://dx.doi.org/10.1007/978-1-59745-066-9_25 ER - TY - JOUR A1 - Basak SC A1 - Gute BD T1 - Mathematical biodescriptors of proteomics maps: Background and applications JO - Curr Opin Drug Discov Devel Y1 - 2008 SP - 320 EP - 6 VL - 11 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18428085&dopt=Abstract ER - TY - JOUR A1 - Michael A. Ewing A1 - Jane Wang A1 - Sarah A. Sheeley A1 - Jonathan V. Sweedler T1 - Detecting D-Amino Acid-Containing Neuropeptides Using Selective Enzymatic Digestion JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 2874 EP - 2880 VL - 80 IS - 8 UR - http://dx.doi.org/10.1021/ac7025173 ER - TY - JOUR A1 - Anastasia K. Yocum A1 - Theresa E. Gratsch A1 - Nancy Leff A1 - John R. Strahler A1 - Christie L. Hunter A1 - Angela K. Walker A1 - George Michailidis A1 - Gilbert S. Omenn A1 - K. Sue O'Shea A1 - Philip C. Andrews T1 - Coupled Global and Targeted Proteomics of Human Embryonic Stem Cells during Induced Differentiation JO - Mol Cell Proteomics Y1 - 2008 SP - 750 EP - 767 VL - 7 IS - 4 UR - http://www.mcponline.org/cgi/content/abstract/7/4/750?etoc ER - TY - JOUR A1 - Cao Xuan Hieu A1 - Birgit Voigt A1 - Dirk Albrecht A1 - Dörte Becher A1 - Thierry Lombardot A1 - Frank Oliver Glöckner A1 - Rudolf Amann A1 - Michael Hecker A1 - Thomas Schweder T1 - Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T JO - PROTEOMICS Y1 - 2008 SP - 1608 EP - 1623 VL - 8 IS - 8 UR - http://dx.doi.org/10.1002/pmic.200701017 ER -