%A Golubnitschaja
%A Olga
%T Clinical Proteomics in Application to Predictive Diagnostics and Personalized Treatment of Diabetic Patients
%0 Journal Article
%D 2008
%J Current Proteomics
%P 35-44
%V 5
%N 1
%U http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00004 

%A Yassel Ramos
%A Elain Gutierrez
%A Yoan Machado
%A Aniel Sánchez
%A Lila Castellanos-Serra
%A Luis J. González
%A Jorge Fernández-de-Cossio
%A Yasset Pérez-Riverol
%A Lázaro Betancourt
%A Jeovanis Gil
%A Gabriel Padrón
%A Vladimir 
%T Proteomics Based on Peptide Fractionation by SDS-Free PAGE
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2427-2434
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700840y

%A Ryberg H
%A Bowser R
%T Protein biomarkers for amyotrophic lateral sclerosis
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 249-62
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.249

%A Mezhoud K
%A Bauchet AL
%A Château-Joubert S
%A Praseuth D
%A Marie A
%A François JC
%A Fontaine JJ
%A Jaeg JP
%A Cravedi JP
%A Puiseux-Dao S
%A Edery M
%T Proteomic and phosphoproteomic analysis of cellular responses in medaka fish (Oryzias latipes) following oral gavage with microcystin-LR
%0 Journal Article
%D 2008
%J Toxicon
%P -
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%N 
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%8 Mar 25, 2008

%A Hattori S
%A Iida N
%A Kosako H
%T Identification of protein kinase substrates by proteomic approaches
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 497-505
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.497

%A Fumiko Matsuzaki
%A Motoyuki Shimizu
%A Hiroyuki Wariishi
%T Proteomic and Metabolomic Analyses of the White-Rot Fungus Phanerochaete chrysosporium Exposed to Exogenous Benzoic Acid
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2342-2350
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700617s

%A Svante Resjö
%A Karin Berger
%A Malin Fex
%A Ola Hansson
%T Proteomic studies in animal models of diabetes
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 654-669
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780030

%A Toews J
%A Rogalski JC
%A Clark TJ
%A Kast J
%T Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions
%0 Journal Article
%D 2008
%J Anal Chim Acta
%P 168-83
%V 618
%N 2
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18513538&dopt=Abstract

%A Chun-Nam Lok
%A Chi-Ming Ho
%A Rong Chen
%A Paul Kwong-Hang Tam
%A Jen-Fu Chiu
%A Chi-Ming Che
%T Proteomic Identification of the Cus System as a Major Determinant of Constitutive Escherichia coli Silver Resistance of Chromosomal Origin
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2351-2356
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700646b

%A Vouyovitch CM
%A Vidal L
%A Borges S
%A Raccurt M
%A Arnould C
%A Chiesa J
%A Lobie PE
%A Lachuer J
%A Mertani HC
%T Proteomic analysis of autocrine/paracrine effects of human growth hormone in human mammary carcinoma cells
%0 Journal Article
%D 2008
%J Adv Exp Med Biol
%P 493-500
%V 617
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%A Weerapana E
%A Simon GM
%A Cravatt BF
%T Disparate proteome reactivity profiles of carbon electrophiles
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%D 
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%A Scott B. Ficarro
%A Jignesh R. Parikh
%A Nathaniel C. Blank
%A Jarrod A. Marto
%T Niobium(V) Oxide (Nb2O5): Application to Phosphoproteomics
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4606-4613
%V 80
%N 12
%U http://dx.doi.org/10.1021/ac800564h

%A Kobeissy FH
%A Sadasivan S
%A Liu J
%A Gold MS
%A Wang KK
%T Psychiatric research: psychoproteomics, degradomics and systems biology
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 293-314
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.293

%A Tribl F
%A Meyer HE
%A Marcus K
%T Analysis of organelles within the nervous system: impact on brain and organelle functions
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 333-51
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.333

%A Seo GM
%A Jung KH
%A Kim SJ
%A Kim JC
%A Yoon JW
%A Oh KK
%A Lee JH
%A Chai YG
%T Bacillus anthracis Spores Influence ATP Synthase Activity in Murine Macrophages
%0 Journal Article
%D 2008
%J J Microbiol Biotechnol
%P 778-83
%V 18
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%A Michelet L
%A Zaffagnini M
%A Vanacker H
%A Le Maréchal P
%A Marchand C
%A Schroda M
%A Lemaire SD
%A Decottignies P
%T In vivo targets of S-thiolation in Chlamydomonas reinhardtii
%0 Journal Article
%D 2008
%J J Biol Chem
%P -
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%8 Jun 5, 2008

%A Van Elzen R
%A Moens L
%A Dewilde S
%T Expression profiling of the cerebral ischemic and hypoxic response
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 263-82
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.263

%A Frank Gillardon
%A Matthias Mack
%A Wolfgang Rist
%A Cathrin Schnack
%A Martin Lenter
%A Tobias Hildebrandt
%A Bastian Hengerer
%T MicroRNA and proteome expression profiling in early-symptomatic ?-synuclein(A30P)-transgenic mice
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 697-705
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780025

%A Razumienko E
%A Ornatsky O
%A Kinach R
%A Milyavsky M
%A Lechman E
%A Baranov V
%A Winnik MA
%A Tanner SD
%T Element-tagged immunoassay with ICP-MS detection: Evaluation and comparison to conventional immunoassays
%0 Journal Article
%D 2008
%J J Immunol Methods
%P 56-63
%V 336
%N 1
%U http://dx.doi.org/10.1016/j.jim.2008.03.011

%A Martinez-Pinna R
%A Martin-Ventura JL
%A Mas S
%A Blanco-Colio LM
%A Tuñon J
%A Egido J
%T Proteomics in atherosclerosis
%0 Journal Article
%D 2008
%J Curr Atheroscler Rep
%P 209-15
%V 10
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18489848&dopt=Abstract

%A Sun Q
%A Miao M
%A Jia X
%A Guo W
%A Wang L
%A Yao Z
%A Liu C
%A Jiao B
%T Subproteomic analysis of the mitochondrial proteins in rats 24 h after partial hepatectomy
%0 Journal Article
%D 2008
%J J Cell Biochem
%P -
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%8 Jun 3, 2008

%A Melanie Y. White
%A Alistair V. G. Edwards
%A Stuart J. Cordwell
%A Jennifer E. Van Eyk
%T Mitochondria: A mirror into cellular dysfunction in heart disease
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 845-861
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780135

%A Zhou M
%A Veenstra T
%T Mass spectrometry: m/z 1983-2008
%0 Journal Article
%D 2008
%J Biotechniques
%P 667-8, 670
%V 44
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474043&dopt=Abstract

%A Ruth C. Lovering
%A Emily Dimmer
%A Varsha K. Khodiyar
%A Daniel G. Barrell
%A Peter Scambler
%A Mike Hubank
%A Rolf Apweiler
%A Philippa J. Talmud
%T Cardiovascular GO Annotation Initiative Year 1 Report: Why Cardiovascular GO?
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 1950-1953
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200800078

%A Hegedus CM
%A Skibola CF
%A Warner M
%A Skibola DR
%A Alexander D
%A Lim S
%A Dangleben N
%A Zhang L
%A Clark M
%A Pfeiffer RM
%A Steinmaus C
%A Smith AH
%A Smith MT
%A Moore LE
%T Decreased Urinary Beta Defensin-1 Expression as a Biomarker of Response to Arsenic
%0 Journal Article
%D 2008
%J Toxicol Sci
%P -
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%8 May 28, 2008

%A Ozgun Babur
%A Recep Colak
%A Emek Demir
%A Ugur Dogrusoz
%T PATIKAmad: Putting microarray data into pathway context
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2196-2198
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200700769

%A Silvestri
%A Elena; Lombardi
%A Assunta; Lange
%A Pieter d.; Lanni
%A Antonia; Goglia
%A Fernando; Moreno
%A Maria
%T Metabolic Action of Thyroid Hormones: Insights from Functional and Proteomic Studies
%0 Journal Article
%D 2008
%J Current Proteomics
%P 45-61
%V 5
%N 1
%U http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00005 

%A Lee
%A Kyoungrim; Lee
%A Joo-Woon
%T Computational Approaches to Protein-Protein Docking
%0 Journal Article
%D 2008
%J Current Proteomics
%P 10-19
%V 5
%N 1
%U http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00002 

%A Olivier Heudi
%A Samuel Barteau
%A Dieter Zimmer
%A Joerg Schmidt
%A Kurt Bill
%A Natalie Lehmann
%A Christian Bauer
%A Olivier Kretz
%T Towards Absolute Quantification of Therapeutic Monoclonal Antibody in Serum by LC−MS/MS Using Isotope-Labeled Antibody Standard and Protein Cleavage Isotope Dilution Mass Spectrometry
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4200-4207
%V 80
%N 11
%U http://dx.doi.org/10.1021/ac800205s

%A Sneekes EJ
%A Damen M
%A Swart R
%A Heck AJ
%T Isoform separation of a multi-acetylated protein using capillary polystyrene-divinylbenzene monolithic columns
%0 Journal Article
%D 
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%A Jennifer Sutton
%A Tori Richmond
%A Xu Shi
%A Michael Athanas
%A Celeste Ptak
%A Robert Gerszten
%A Leo Bonilla
%T Performance characteristics of an FT MS-based workflow for label-free differential MS analysis of human plasma: standards, reproducibility, targeted feature investigation, and application to a model of controlled myocardial infarction
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 862-881
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780057

%A Chandler JM
%A Treece ER
%A Trenary HR
%A Brenneman JL
%A Flickner TJ
%A Frommelt JL
%A Oo ZM
%A Patterson MM
%A Rundle WT
%A Valle OV
%A Kim TD
%A Walker GR
%A Cooper CR Jr
%T Protein profiling of the dimorphic, pathogenic fungus, Penicillium marneffei
%0 Journal Article
%D 
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%A Sergeant N
%A Bretteville A
%A Hamdane M
%A Caillet-Boudin ML
%A Grognet P
%A Bombois S
%A Blum D
%A Delacourte A
%A Pasquier F
%A Vanmechelen E
%A Schraen-Maschke S
%A Buee L
%T Biochemistry of Tau in Alzheimer's disease and related neurological disorders
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 207-24
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.207

%A Wu DL
%A Zhang WH
%A Wang WJ
%A Jing SB
%A Xu YM
%T Proteomic Evaluation of Urine from Renal Cell Carcinoma Using SELDI-TOF-MS and Tree Analysis Pattern
%0 Journal Article
%D 2008
%J Technol Cancer Res Treat
%P 155-60
%V 7
%N 3
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473487&dopt=Abstract

%A John W. Holland
%A Hilton C. Deeth
%A Paul F. Alewood
%T Analysis of disulphide linkages in bovine ?-casein oligomers using two-dimensional electrophoresis
%0 Journal Article
%D 2008
%J ELECTROPHORESIS
%P 2402-2410
%V 29
%N 11
%U http://dx.doi.org/10.1002/elps.200700840

%A Andrés JA
%A Maroja LS
%A Harrison RG
%T Searching for candidate speciation genes using a proteomic approach: seminal proteins in field crickets
%0 Journal Article
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%A Prins A
%A van Heerden PD
%A Olmos E
%A Kunert KJ
%A Foyer CH
%T Cysteine proteinases regulate chloroplast protein content and composition in tobacco leaves: a model for dynamic interactions with ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) vesicular bodies
%0 Journal Article
%D 2008
%J J Exp Bot
%P 1935-50
%V 59
%N 7
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18503045&dopt=Abstract

%A Shenouda SK
%A Lord KC
%A McIlwain E
%A Lucchesi PA
%A Varner KJ
%T Ecstasy produces left ventricular dysfunction and oxidative stress in rats
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%A List EO
%A Berryman DE
%A Bower B
%A Sackmann-Sala L
%A Gosney E
%A Ding J
%A Okada S
%A Kopchick JJ
%T The Use of Proteomics to Study Infectious Diseases
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%D 2008
%J Infect Disord Drug Targets
%P 31-45
%V 8
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473905&dopt=Abstract

%A Tannu NS
%A Howell LL
%A Hemby SE
%T Integrative proteomic analysis of the nucleus accumbens in rhesus monkeys following cocaine self-administration
%0 Journal Article
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%J Mol Psychiatry
%P -
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%8 May 27, 2008

%A Esmé Waanders
%A Anke L. L. Lameris
%A Huub J. M. Op den Camp
%A Wendy Pluk
%A Jolein Gloerich
%A Simon P. Strijk
%A Joost P. H. Drenth
%T Hepatocystin Is Not Secreted in Cyst Fluid of Hepatocystin Mutant Polycystic Liver Patients
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2490-2495
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr8000282

%A Sonia Molina
%A Dorothée Missé
%A Stéphane Roche
%A Stéphanie Badiou
%A Jean-Paul Cristol
%A Claude Bonfils
%A Jean-François Dierick
%A Francisco Veas
%A Thierry Levayer
%A Dominique Bonnefont-Rousselot
%A Patrick Maurel
%A Joliette Coste
%A Chantal Fournier-Wirth
%T Identification of apolipoprotein C-III as a potential plasmatic biomarker associated with the resolution of hepatitis C virus infection
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 751-761
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200800020

%A Kashem MA
%A Harper C
%A Matsumoto I
%T Differential protein expression in the corpus callosum (genu) of human alcoholics
%0 Journal Article
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%J Neurochem Int
%P -
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%8 Apr 20, 2008

%A McHugh L
%A Arthur JW
%T Computational methods for protein identification from mass spectrometry data
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%A Liu Z
%A Yang X
%A Fu Y
%A Zhang Y
%A Yan J
%A Song T
%A Rocheford T
%A Li J
%T Proteomic analysis of early germs with high-oil and normal inbred lines in maize
%0 Journal Article
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%J Mol Biol Rep
%P -
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%U http://dx.doi.org/10.1007/s11033-008-9250-3
%8 Jun 4, 2008

%A Nan Wang and Liang Li
%T Exploring the Precursor Ion Exclusion Feature of Liquid Chromatography−Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry for Improving Protein Identification in Shotgun Proteome Analysis
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4696-4710
%V 80
%N 12
%U http://dx.doi.org/10.1021/ac800260w

%A Laura Buggiotti
%A Craig R. Primmer
%A Petri Kouvonen
%A Stanislav Bure?
%A Garry L. Corthals
%A Erica H. Leder
%T Identification of differentially expressed proteins in Ficedula flycatchers
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2150-2153
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200701006

%A Makoto Watanabe
%A Ichiro Takemasa
%A Naomasa Kawaguchi
%A Masakazu Miyake
%A Noriko Nishimura
%A Toshiya Matsubara
%A Ei-ichi Matsuo
%A Mitsugu Sekimoto
%A Katsuya Nagai
%A Nariaki Matsuura
%A Morito Monden
%A Osamu Nishimura
%T An application of the 2-nitrobenzenesulfenyl method to proteomic profiling of human colorectal carcinoma: A novel approach for biomarker discovery
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 925-935
%V 2
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%U http://dx.doi.org/10.1002/prca.200780111

%A Obermeier B
%A Mentele R
%A Malotka J
%A Kellermann J
%A Kümpfel T
%A Wekerle H
%A Lottspeich F
%A Hohlfeld R
%A Dornmair K
%T Matching of oligoclonal immunoglobulin transcriptomes and proteomes of cerebrospinal fluid in multiple sclerosis
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%A Ristorcelli E
%A Beraud E
%A Verrando P
%A Villard C
%A Lafitte D
%A Sbarra V
%A Lombardo D
%A Verine A
%T Human tumor nanoparticles induce apoptosis of pancreatic cancer cells
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%J FASEB J
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%8 May 29, 2008

%A Li KW
%A Smit AB
%T Subcellular proteomics in neuroscience
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%J Front Biosci
%P 4416-25
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%A Umar A
%A Jaremko M
%A Burgers PC
%A Luider TM
%A Foekens JA
%A Pasa-Tolic L
%T High-throughput proteomics of breast carcinoma cells: a focus on FTICR-MS
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 445-55
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.445

%A Mojtahedi Z
%A Clos J
%A Kamali-Sarvestani E
%T Leishmania major: Identification of developmentally regulated proteins in procyclic and metacyclic promastigotes
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%A Bibl M
%A Wiltfang J
%T Diagnostic and prognostic needs in neurodegenerative disorders: focus on proteomics
%0 Journal Article
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%J Expert Rev Proteomics
%P 153-6
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%U http://dx.doi.org/10.1586/14789450.5.2.153

%A Liu Y
%A Kim I
%A Zhao H
%T Protein interaction predictions from diverse sources
%0 Journal Article
%D 2008
%J Drug Discov Today
%P 409-16
%V 13
%N 9-10
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18468558&dopt=Abstract

%A Visser NF
%A Heck AJ
%T Surface plasmon resonance mass spectrometry in proteomics
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 425-33
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.425

%A Li X
%A Zhang Y
%A Hu Y
%A Chang M
%A Liu T
%A Wang D
%A Zhang Y
%A Zhang L
%A Hu L
%T Chaperone proteins identified from synthetic proteasome inhibitor-induced inclusions in PC12 cells by proteomic analysis
%0 Journal Article
%D 2008
%J Acta Biochim Biophys Sin (Shanghai)
%P 406-18
%V 40
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18465026&dopt=Abstract

%A Rukhsana Sultana
%A D. Allan Butterfield
%T Redox proteomics studies of in vivo amyloid beta-peptide animal models of Alzheimer's disease: Insight into the role of oxidative stress
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 685-696
%V 2
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%U http://dx.doi.org/10.1002/prca.200780024

%A Bryan M. Ham
%A Feng Yang
%A Hemalatha Jayachandran
%A Navdeep Jaitly
%A Matthew E. Monroe
%A Marina A. Gritsenko
%A Eric A. Livesay
%A Rui Zhao
%A Samuel O. Purvine
%A Daniel Orton
%A Joshua N. Adkins
%A David G. Camp II
%A Sandra Rossie
%A Richard D. Smith
%T The Influence of Sample Preparation and Replicate Analyses on HeLa Cell Phosphoproteome Coverage
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%A Yan Li
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%A Dawei Qi
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%T Novel Fe3O4@TiO2 Core−Shell Microspheres for Selective Enrichment of Phosphopeptides in Phosphoproteome Analysis
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%U http://dx.doi.org/10.1021/pr700582z

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%T Proteomic investigation of taxol and taxotere resistance and invasiveness in a squamous lung carcinoma cell line
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%A Pabst MJ
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%T Proteome of monocyte priming by lipopolysaccharide, including changes in interleukin 1 beta and leukocyte elastase inhibitor
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%T Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research
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%A Brettschneider J
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%T Proteome Analysis of Cerebrospinal Fluid in Amyotrophic Lateral Sclerosis (ALS)
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%T Plastoglobule proteome
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%A Yamanaka H
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%T High-accuracy Prediction of Carcinogenicity by Global Quantitative Analysis of Post-translational Modifications in a 28-Day In Vivo Rat Study
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%A Alos E
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%T An evaluation of the basis and consequences of a stay-green mutation in the navel negra (nan) citrus mutant using transcriptomic and proteomic profiling and metabolite analysis
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%A Tune Wulff
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%A Peter Roepstorff
%A Flemming Jessen
%T Comparison of two anoxia models in rainbow trout cells by a 2-DE and MS/MS-based proteome approach
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%A Karl-Friedrich Becker
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%A Ingrid Becker
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%T Guided protein extraction from formalin-fixed tissues for quantitative multiplex analysis avoids detrimental effects of histological stains
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%P 737-743
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%U http://dx.doi.org/10.1002/prca.200780106

%A Rebecca L. Charles
%A Philip Eaton
%T Redox signalling in cardiovascular disease
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%A Zhang S
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%T Proteomic alteration in lung tissue of rats exposed to cigarette smoke
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%A Huang H
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%T Proteomic Analysis of and Immune Responses to Ehrlichia chaffeensis Lipoproteins
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%A Miroslav Fojta
%A Sabina Billová
%A Luděk Havran
%A Hana Pivoňková
%A Hana Černocká
%A Petra Horáková
%A Emil Paleček
%T Osmium Tetroxide, 2,2′-Bipyridine: Electroactive Marker for Probing Accessibility of Tryptophan Residues in Proteins
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%A Xiang-min Lin
%A Hui Li
%A Chao Wang
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%T Proteomic Analysis of Nalidixic Acid Resistance in Escherichia coli: Identification and Functional Characterization of OM Proteins
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%A Sang Woo Kim
%A Hye Jin Hwang
%A Yu Mi Baek
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%A Hee Sun Hwang
%A Jong Won Yun
%T Proteomic and transcriptomic analysis for streptozotocin-induced diabetic rat pancreas in response to fungal polysaccharide treatments
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%A Kim DK
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%T Label-free optical detection of aptamer-protein interactions using gold-capped oxide nanostructures
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%A Taufika Islam Williams
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%T Studying O-Linked Protein Glycosylations in Human Plasma
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%U http://dx.doi.org/10.1021/pr800066e

%A Butterfield DA
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%T Redox proteomics: understanding oxidative stress in the progression of age-related neurodegenerative disorders
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%A Giovanni Ciriello and Concettina Guerra
%T A review on models and algorithms for motif discovery in protein-protein interaction networks
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%A Rebecca D. Taylor
%A Audrey Saparno
%A Barbara Blackwell
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%A Steve Gleddie
%A Nicholas A. Tinker
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%T Proteomic analyses of Fusarium graminearum grown under mycotoxin-inducing conditions
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%A Sara P. Gaucher
%A Alyssa M. Redding
%A Aindrila Mukhopadhyay
%A Jay D. Keasling
%A Anup K. Singh
%T Post-Translational Modifications of Desulfovibrio vulgaris Hildenborough Sulfate Reduction Pathway Proteins
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%A Pechanova O
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%T Global and comparative protein profiles of the pronotum of the southern pine beetle, Dendroctonus frontalis
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%A Joram J. Buza and Shane C. Burgess
%T Different Signaling Pathways Expressed by Chicken Naïve CD4+ T Cells, CD4+ Lymphocytes Activated with Staphylococcal Enterotoxin B, and Those Malignantly Transformed by Marek’s Disease Virus
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%U http://dx.doi.org/10.1021/pr700844z

%A Hendrik Neubert
%A Timothy P. Bonnert
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%T Label-Free Detection of Differential Protein Expression by LC/MALDI Mass Spectrometry
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%A Tasneem H. Patwa
%A Yanfei Wang
%A Diane M. Simeone
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%T Enhanced Detection of Autoantibodies on Protein Microarrays Using a Modified Protein Digestion Technique
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%A Mark A. Baker
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%A Jörg Müller
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%T The rat sperm proteome characterized via IPG strip prefractionation and LC-MS/MS identification
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%A Dziadziuszko R
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%T Advances in genomic and proteomic studies of non-small-cell lung cancer: clinical and translational research perspective
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%A Choi YE
%A Shim WB
%T Identification of Genes Associated with Fumonisin Biosynthesis in Fusarium verticillioides via Proteomics and Quantitative Real-Time PCR
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%A Lv S
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%T Senescence marker protein 30 in acute liver failure: validation of a mass spectrometry proteomics assay
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%A He H
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%T Proteomic analysis of phosphoproteins regulated by abscisic acid in rice leaves
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%J Biochem Biophys Res Commun
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%A Paoletti AC
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%T Quantitation in proteomic experiments utilizing mass spectrometry
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%A Cathrin Schnack
%A Bastian Hengerer
%A Frank Gillardon
%T Identification of novel substrates for Cdk5 and new targets for Cdk5 inhibitors using high-density protein microarrays
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200701063

%A Shiota M
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%A Hikita Y
%A Nakao T
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%T Pharmacogenomics of cardiovascular pharmacology: molecular network analysis in pleiotropic effects of statin - an experimental elucidation of the pharmacologic action from protein-protein interaction analysis
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%A Bernstein HG
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%A Schmitt A
%A van der Schors R
%A Smit AB
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%T A comparison of the synaptic proteome in human chronic schizophrenia and rat ketamine psychosis suggest that prohibitin is involved in the synaptic pathology of schizophrenia
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%8 May 27, 2008

%A Yang S
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%T Comparative proteomic analysis of brains of naturally aging mice
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%A Chi-An Hsu
%A Wei-Ru Lin
%A Jung-Chen Li
%A Yi-Lung Liu
%A Yen-Tzu Tseng
%A Chun-Mien Chang
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%A Chiou-Ying Yang
%T Immunoproteomic identification of the hypothetical protein NMB1468 as a novel lipoprotein ubiquitous in Neisseria meningitidis with vaccine potential
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%U http://dx.doi.org/10.1002/pmic.200700574

%A Graham M. West
%A Liangjie Tang
%A Michael C. Fitzgerald
%T Thermodynamic Analysis of Protein Stability and Ligand Binding Using a Chemical Modification- and Mass Spectrometry-Based Strategy
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%A Walker JW
%T Protein scaffolds, lipid domains and substrate recognition in protein kinase C function: implications for rational drug design
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%A Xiuxia Du
%A Feng Yang
%A Nathan P. Manes
%A David L. Stenoien
%A Matthew E. Monroe
%A Joshua N. Adkins
%A David J. States
%A Samuel O. Purvine
%A David G. Camp
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%T Linear Discriminant Analysis-Based Estimation of the False Discovery Rate for Phosphopeptide Identifications
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%J JOURNAL OF PROTEOME RESEARCH
%P 2195-2203
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%U http://dx.doi.org/10.1021/pr070510t

%A Calvo
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%T Mass Spectrometry for Studying the Interaction between Small Molecules and Proteins
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%A Meuwis MA
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%T Proteomics for prediction and characterization of response to infliximab in Crohn's disease: A pilot study
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%A Cobb SR
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%T Proteomics in the study of hippocampal plasticity
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%U http://dx.doi.org/10.1586/14789450.5.3.393

%A Srivastava S
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%A Manel N
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%T Lentiviral Vpx accessory factor targets VprBP/DCAF1 substrate adaptor for cullin 4 E3 ubiquitin ligase to enable macrophage infection
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%A Chia-Kai Chang
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%A Huan-Cheng Chang
%T Selective Extraction and Enrichment of Multiphosphorylated Peptides Using Polyarginine-Coated Diamond Nanoparticles
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%A Andrea Biondani
%A Franco Turrini
%A Franco Carta
%A Alessandro Matté
%A Alida Filippini
%A Angela Siciliano
%A Yves Beuzard
%A Lucia De Franceschi
%T Heat-shock protein-27, -70 and peroxiredoxin-II show molecular chaperone function in sickle red cells: Evidence from transgenic sickle cell mouse model
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%J PROTEOMICS - CLINICAL APPLICATIONS
%P 706-719
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%U http://dx.doi.org/10.1002/prca.200780058

%A Desire TK
%A Victor M
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%T Probing mechanisms of axonopathy. Part I: Protein targets of 1,2-diacetylbenzene, the neurotoxic metabolite of aromatic solvent 1,2-diethylbenzene
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%8 May 22, 2008

%A Samuel Patient
%A Daniela Wieser
%A Michael Kleen
%A Ernst Kretschmann
%A Maria Jesus Martin
%A Rolf Apweiler
%T UniProtJAPI: a remote API for accessing UniProt data
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%J Bioinformatics
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%A Sun W
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%T A comparative study on proteomics between LNCap and DU145 cells by quantitative detection and SELDI analysis
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%A Tadashi Yamamoto
%A Robyn G. Langham
%A Pierre Ronco
%A Mark A. Knepper
%A Visith Thongboonkerd
%T Towards Standard Protocols and Guidelines for Urine Proteomics: A Report on the Human Kidney and Urine Proteome Project (HKUPP) Symposium and Workshop 6 October 2007, Seoul, Korea and 1 November 2007, San Francisco, CA, USA
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%A Hélida M. Andrade
%A Silvane M. F. Murta
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%T Proteomic Analysis of Trypanosoma cruzi Resistance to Benznidazole
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%U http://dx.doi.org/10.1021/pr700659m

%A Streit F
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%T Acid adaptation of Lactobacillus delbrueckii subsp. bulgaricus induces physiological responses at membrane and cytosolic levels that improves cryotolerance
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%A Jie Li
%A Xu-Dong Wu
%A Shan-Ting Hao
%A Xiu-Jie Wang
%A Hong-Qing Ling
%T Proteomic response to iron deficiency in tomato root
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%U http://dx.doi.org/10.1002/pmic.200700942

%A Tabatabai LB
%T Identification of Pasteurella multocida CHAPS-soluble outer membrane proteins
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%T Rapid preparation of nuclei-depleted detergent-resistant membrane fractions suitable for proteomics analysis
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%T Proteomic analysis of MCF-7 cells treated with benzo[a]pyrene, dibenzo[a,l]pyrene, coal tar extract, and diesel exhaust extract
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%T Systems biology approaches for the study of multiple sclerosis
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%A Ahmed FE
%T Mining the oncoproteome and studying molecular interactions for biomarker development by 2DE, ChIP and SPR technologies
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%A Clermont F
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%T HDGF is dephosphorylated during the early steps of endothelial cell apoptosis in a caspase-dependent way
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%A Singh G
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%T Proteomic analysis of miltefosine-resistant Leishmania reveals the possible involvement of eukaryotic initiation factor 4A (eIF4A)
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%J Int J Antimicrob Agents
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%N 6
%U http://dx.doi.org/10.1016/j.ijantimicag.2008.01.032

%A Zhang Y
%A Wang YH
%A Zhang XH
%A Ge HY
%A Arendt-Nielsen L
%A Shao JM
%A Yue SW
%T Proteomic analysis of differential proteins related to the neuropathic pain and neuroprotection in the dorsal root ganglion following its chronic compression in rats
%0 Journal Article
%D 
%J 
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%A Rustichelli C
%A Visioli G
%A Kostecka D
%A Vurro E
%A Sanità di Toppi L
%A Marmiroli N
%T Proteomic analysis in the lichen Physcia adscendens exposed to cadmium stress
%0 Journal Article
%D 2008
%J Environ Pollut
%P -
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%8 May 29, 2008

%A Zabel C
%A Andreew A
%A Mao L
%A Hartl D
%T Protein expression overlap: more important than which proteins change in expression?
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 187-205
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.187

%A Brunetti S
%A Lodi E
%A Mori E
%A Stella M
%T PARPST: a PARallel algorithm to find peptide sequence tags
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%A Ben-Bo Gao
%A Xiaohong Chen
%A Nigel Timothy
%A Lloyd Paul Aiello
%A Edward P. Feener
%T Characterization of the Vitreous Proteome in Diabetes without Diabetic Retinopathy and Diabetes with Proliferative Diabetic Retinopathy
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2516-2525
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr800112g

%A Boschetti E
%A Giorgio Righetti P
%T Hexapeptide combinatorial ligand libraries: the march for the detection of the low-abundance proteome continues
%0 Journal Article
%D 2008
%J Biotechniques
%P 663-5
%V 44
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474042&dopt=Abstract

%A Salvadó Z
%A Chiva R
%A Rodríguez-Vargas S
%A Rández-Gil F
%A Mas A
%A Guillamón JM
%T Proteomic evolution of a wine yeast during the first hours of fermentation
%0 Journal Article
%D 2008
%J FEMS Yeast Res
%P -
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%N 
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%8 May 22, 2008

%A Hess S
%A Chen X
%T Applications of proteomics to the study of adipose tissue
%0 Journal Article
%D 2008
%J Methods Mol Biol
%P 131-40
%V 456
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%A Jean-Daniel Tissot
%A Niels Lion
%T Clinical Proteomics: From Diagnosis to Therapy. By J. E. Van Eyk and M. J. Dunn (Eds.)
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%A Xun M
%A Zhao SH
%A Cao CX
%A Song J
%A Shao MM
%A Chu YL
%T Proteomic analysis of HuH-7 cells harboring in vitro-transcribed full-length hepatitis C virus 1b RNA
%0 Journal Article
%D 2008
%J Acta Pharmacol Sin
%P 720-7
%V 29
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18501119&dopt=Abstract

%A Shaw ML
%A Stone KL
%A Colangelo CM
%A Gulcicek EE
%A Palese P
%T Cellular proteins in influenza virus particles
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%A Seo HS
%A Hirano M
%A Shibato J
%A Rakwal R
%A Hwang IK
%A Masuo Y
%T Effects of Coffee Bean Aroma on the Rat Brain Stressed by Sleep Deprivation: A Selected Transcript- and 2D Gel-Based Proteome Analysis
%0 Journal Article
%D 2008
%J J Agric Food Chem
%P -
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%N 
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%8 Jun 3, 2008

%A Misato Hirano
%A Randeep Rakwal
%A Junko Shibato
%A Hirofumi Sawa
%A Kazuo Nagashima
%A Yoko Ogawa
%A Yasukazu Yoshida
%A Hitoshi Iwahashi
%A Etsuo Niki
%A Yoshinori Masuo
%T Proteomics- and Transcriptomics-Based Screening of Differentially Expressed Proteins and Genes in Brain of Wig Rat: A Model for Attention Deficit Hyperactivity Disorder (ADHD) Research
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2471-2489
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr800025t

%A Shaohui Sui
%A Jinglan Wang
%A Bing Yang
%A Lina Song
%A Jiyang Zhang
%A Ming Chen
%A Jinfeng Liu
%A Zhuang Lu
%A Yun Cai
%A Shuo Chen
%A Wei Bi
%A Yunping Zhu
%A Fuchu He
%A Xiaohong Qian
%T Phosphoproteome analysis of the human Chang liver cells using SCX and a complementary mass spectrometric strategy
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2024-2034
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200700896

%A Shannon L. Seurynck-Servoss
%A Cheryl L. Baird
%A Keith D. Miller
%A Noah B. Pefaur
%A Rachel M. Gonzalez
%A David O. Apiyo
%A Heather E. Engelmann
%A Sudhir Srivastava
%A Jacob Kagan
%A Karin D. Rodland
%A Richard C. Zangar
%T Immobilization strategies for single-chain antibody microarrays
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2199-2210
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200701036

%A Hsu KL
%A Gildersleeve JC
%A Mahal LK
%T A simple strategy for the creation of a recombinant lectin microarray
%0 Journal Article
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%J Mol Biosyst
%P 654-62. Epub 2008 Apr 14
%V 4
%N 6
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18493664&dopt=Abstract

%A Fasano M
%A Lopiano L
%T Alpha-synuclein and Parkinson's disease: a proteomic view
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 239-48
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.239

%A Choi MR
%A Najafi F
%A Safa AR
%A Drexler HC
%T Analysis of changes in the proteome of HL-60 promyeloid leukemia cells induced by the proteasome inhibitor PSI
%0 Journal Article
%D 2008
%J Biochem Pharmacol
%P 2276-88
%V 75
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%U http://dx.doi.org/10.1016/j.bcp.2008.03.017

%A Canales BK
%A Anderson L
%A Higgins L
%A Slaton J
%A Roberts KP
%A Liu N
%A Monga M
%T Second Prize: Comprehensive Proteomic Analysis of Human Calcium Oxalate Monohydrate Kidney Stone Matrix
%0 Journal Article
%D 
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%A Yuan Zhou
%A Inderjeet Bhatia
%A Zhen Cai
%A Qing-Yu He
%A Pik-To Cheung
%A Jen-Fu Chiu
%T Proteomic Analysis of Neonatal Mouse Brain: Evidence for Hypoxia- and Ischemia-Induced Dephosphorylation of Collapsin Response Mediator Proteins
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2507-2515
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr800108k

%A Pienaar IS
%A Daniels WM
%A Götz J
%T Neuroproteomics as a promising tool in Parkinson's disease research
%0 Journal Article
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%J J Neural Transm
%P -
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%N 
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%8 Jun 4, 2008

%A Chen G
%A Pramanik BN
%T LC-MS for protein characterization: current capabilities and future trends
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 435-44
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.435

%A Hongying Du
%A Xiaoyun Zhang
%A Jie Wang
%A Xiaojun Yao
%A Zhide Hu
%T Novel approaches to predict the retention of histidine-containing peptides in immobilized metal-affinity chromatography
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2185-2195
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200700788

%A Manuel Mayr
%A Jennifer E. Van Eyk
%T Cardiovascular Proteomics
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 785-786
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200890020

%A Sadiq ST
%A Agranoff D
%T Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling
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%A Sidhu VK
%A Vorhoelter FJ
%A Niehaus K
%A Watt SA
%T Analysis of outer membrane vesicle associated proteins isolated from the plant pathogenic bacterium Xanthomonas campestris pv. campestris
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%A Giordano Pula
%A Sue Perera
%A Marianna Prokopi
%A Anissa Sidibe
%A Chantal M. Boulanger
%A Manuel Mayr
%T Proteomic analysis of secretory proteins and vesicles in vascular research
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 882-891
%V 2
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%U http://dx.doi.org/10.1002/prca.200800040

%A Korolainen MA
%A Corthals GL
%A Kouvonen P
%A Kurkinen KM
%A Nyman TA
%T 3rd Annual FinnProt Meeting: from cells to systems
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 389-91
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.389

%A Van Duyne R
%A Kehn-Hall K
%A Klase Z
%A Easley R
%A Heydarian M
%A Saifuddin M
%A Wu W
%A Kashanchi F
%T Retroviral proteomics and interactomes: intricate balances of cell survival and viral replication
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 507-28
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.507

%A Tanner M. Schaub
%A Christopher L. Hendrickson
%A Stevan Horning
%A John P. Quinn
%A Michael W. Senko
%A Alan G. Marshall
%T High-Performance Mass Spectrometry: Fourier Transform Ion Cyclotron Resonance at 14.5 Tesla
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 3985-3990
%V 80
%N 11
%U http://dx.doi.org/10.1021/ac800386h

%A Clokie MR
%A Thalassinos K
%A Boulanger P
%A Slade SE
%A Stoilova-McPhie S
%A Cane M
%A Scrivens JH
%A Mann NH
%T A proteomic approach to the identification of the major virion structural proteins of the marine cyanomyovirus S-PM2
%0 Journal Article
%D 2008
%J Microbiology
%P 1775-82
%V 154
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18524932&dopt=Abstract

%A Rezaul K
%A Wilson LL
%A Han DK
%T Direct tissue proteomics in human diseases: potential applications to melanoma research
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 405-12
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.405

%A Sowell SM
%A Norbeck AD
%A Lipton MS
%A Nicora CD
%A Callister SJ
%A Smith RD
%A Barofsky DF
%A Giovannoni SJ
%T Proteomic Analysis of Stationary Phase in the Marine Bacterium Candidatus Pelagibacter ubique
%0 Journal Article
%D 2008
%J Appl Environ Microbiol
%P -
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%8 May 9, 2008

%A Schubert W
%A Bode M
%A Hillert R
%A Krusche A
%A Friedenberger M
%T Toponomics and neurotoponomics: a new way to medical systems biology
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 361-9
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%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.361

%A Jayapal KP
%A Philp RJ
%A Kok YJ
%A Yap MG
%A Sherman DH
%A Griffin TJ
%A Hu WS
%T Uncovering genes with divergent mRNA-protein dynamics in Streptomyces coelicolor
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%A Demou ZN
%T Time-lapse analysis and microdissection of living 3D melanoma cell cultures for genomics and proteomics
%0 Journal Article
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%J Biotechnol Bioeng
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%8 Mar 19, 2008

%A Bantscheff M
%A Hopf C
%A Kruse U
%A Drewes G
%T Proteomics-based strategies in kinase drug discovery
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%A Jones TH
%A Johns MW
%A Gill CO
%T Changes in the proteome of Escherichia coli during growth at 15 degrees C after incubation at 2, 6 or 8 degrees C for 4 days
%0 Journal Article
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%J Int J Food Microbiol
%P 299-302
%V 124
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%U http://dx.doi.org/10.1016/j.ijfoodmicro.2008.03.016

%A Ferino G
%A González-Díaz H
%A Delogu G
%A Podda G
%A Uriarte E
%T Using spectral moments of spiral networks based on PSA/mass spectra outcomes to derive quantitative proteome-disease relationships (QPDRs) and predicting prostate cancer
%0 Journal Article
%D 2008
%J Biochem Biophys Res Commun
%P 320-5
%V 372
%N 2
%U http://dx.doi.org/10.1016/j.bbrc.2008.05.071

%A Ratushny V
%A Golemis E
%T Resolving the network of cell signaling pathways using the evolving yeast two-hybrid system
%0 Journal Article
%D 2008
%J Biotechniques
%P 655-62
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474041&dopt=Abstract

%A Hamacher M
%A Stephan C
%A Eisenacher M
%A Hardt T
%A Marcus K
%A Meyer HE
%T Maintaining standardization: an update of the HUPO Brain Proteome Project
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 165-73
%V 5
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%U http://dx.doi.org/10.1586/14789450.5.2.165

%A Estelle Rousselet
%A Alain Martelli
%A Mireille Chevallet
%A Hélène Diemer
%A Alain Van Dorsselaer
%A Thierry Rabilloud
%A Jean-Marc Moulis
%T Zinc adaptation and resistance to cadmium toxicity in mammalian cells: Molecular insight by proteomic analysis
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2244-2255
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200701067

%A Issaq H
%A Veenstra T
%T Two-dimensional polyacrylamide gel electrophoresis (2D-PAGE): advances and perspectives
%0 Journal Article
%D 2008
%J Biotechniques
%P 697-8, 700
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474047&dopt=Abstract

%A Dekker C
%A Stirling PC
%A McCormack EA
%A Filmore H
%A Paul A
%A Brost RL
%A Costanzo M
%A Boone C
%A Leroux MR
%A Willison KR
%T The interaction network of the chaperonin CCT
%0 Journal Article
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%J EMBO J
%P -
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%U http://dx.doi.org/10.1038/emboj.2008.108
%8 May 29, 2008

%A Angela Bachi
%A Carolina Simó
%A Umberto Restuccia
%A Luc Guerrier
%A Frederic Fortis
%A Egisto Boschetti
%A Marco Masseroli
%A Pier Giorgio Righetti
%T Performance of Combinatorial Peptide Libraries in Capturing the Low-Abundance Proteome of Red Blood Cells. 2. Behavior of Resins Containing Individual Amino Acids
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 3557-3565
%V 80
%N 10
%U http://dx.doi.org/10.1021/ac8001353

%A Baukje de Roos
%A Susan J. Duthie
%A Abigael C. J. Polley
%A Francis Mulholland
%A Freek G. Bouwman
%A Carolin Heim
%A Garry J. Rucklidge
%A Ian T. Johnson
%A Edwin C. Mariman
%A Hannelore Daniel
%A Ruan M. Elliott
%T Proteomic Methodological Recommendations for Studies Involving Human Plasma, Platelets, and Peripheral Blood Mononuclear Cells
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2280-2290
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700714x

%A Rachel M. Gonzalez
%A Shannon L. Seurynck-Servoss
%A Sheila A. Crowley
%A Marty Brown
%A Gilbert S. Omenn
%A Daniel F. Hayes
%A Richard C. Zangar
%T Development and Validation of Sandwich ELISA Microarrays with Minimal Assay Interference
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2406-2414
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700822t

%A Yu CL
%A Yan SP
%A Wang CC
%A Hu HT
%A Sun WN
%A Yan CQ
%A Chen JP
%A Yang L
%T Pathogenesis-related proteins in somatic hybrid rice induced by bacterial blight
%0 Journal Article
%D 2008
%J Phytochemistry
%P -
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%8 Jun 3, 2008

%A Alexei L. Krasnoselsky
%A Vitor M. Faca
%A Sharon J. Pitteri
%A Qing Zhang
%A Samir M. Hanash
%T Isoform Analysis of LC−MS/MS Data from Multidimensional Fractionation of the Serum Proteome
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2546-2552
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr7007219

%A Pflieger D
%A Rossier J
%T Organelle proteomics. Preface
%0 Journal Article
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%J Methods Mol Biol
%P v-viii
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%A Zhao Y
%A Denner L
%A Haidacher SJ
%A Lejeune WS
%A Tilton RG
%T Comprehensive analysis of the mouse renal cortex using two-dimensional HPLC - tandem mass spectrometry
%0 Journal Article
%D 
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%A Rebekah L. Gundry
%A Kenneth R. Boheler
%A Jennifer E. Van Eyk
%A Bernd Wollscheid
%T A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 892-903
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780122

%A Taipa MA
%T Immunoassays: biological tools for high throughput screening and characterisation of combinatorial libraries
%0 Journal Article
%D 2008
%J Comb Chem High Throughput Screen
%P 325-35
%V 11
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473742&dopt=Abstract

%A Rahul Singh
%T A review of algorithmic techniques for disulfide-bond determination
%0 Journal Article
%D 2008
%J Brief Funct Genomic Proteomic
%P 157-172; doi:10.1093/bfgp/eln008
%V 7
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%U http://bfgp.oxfordjournals.org/cgi/content/abstract/7/2/157?etoc

%A Sergio de la Fuente van Bentem
%A Dorothea Anrather
%A Ilse Dohnal
%A Elisabeth Roitinger
%A Edina Csaszar
%A Jos Joore
%A Joshua Buijnink
%A Alessandro Carreri
%A Celine Forzani
%A Zdravko J. Lorkovic
%A Andrea Barta
%A David Lecourieux
%A Andreas Verhounig
%A Claudia Jonak
%A 
%T Site-Specific Phosphorylation Profiling of Arabidopsis Proteins by Mass Spectrometry and Peptide Chip Analysis
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2458-2470
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr8000173

%A Sarkar P
%A Sarkar S
%A Ramesh V
%A Kim H
%A Barnes S
%A Kulkarni A
%A Hall JC
%A Wilson BL
%A Thomas RL
%A Pellis NR
%A Ramesh GT
%T Proteomic Analysis of Mouse Hypothalamus under Simulated Microgravity
%0 Journal Article
%D 2008
%J Neurochem Res
%P -
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%N 
%U http://dx.doi.org/10.1007/s11064-008-9738-1
%8 May 13, 2008

%A Li KW
%A Jimenez CR
%T Synapse proteomics: current status and quantitative applications
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 353-60
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.353

%A Yurist-Doutsch S
%A Chaban B
%A VanDyke DJ
%A Jarrell KF
%A Eichler J
%T Sweet to the extreme: protein glycosylation in Archaea
%0 Journal Article
%D 2008
%J Mol Microbiol
%P 1079-84
%V 68
%N 5
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18476920&dopt=Abstract

%A Buhimschi CS
%A Abdel-Razeq S
%A Cackovic M
%A Pettker CM
%A Dulay AT
%A Bahtiyar MO
%A Zambrano E
%A Martin R
%A Norwitz ER
%A Bhandari V
%A Buhimschi IA
%T Fetal Heart Rate Monitoring Patterns in Women with Amniotic Fluid Proteomic Profiles Indicative of Inflammation
%0 Journal Article
%D 2008
%J Am J Perinatol
%P -
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%N 
%U http://dx.doi.org/10.1055/s-2008-1078761
%8 May 29, 2008

%A Suter B
%A Kittanakom S
%A Stagljar I
%T Interactive proteomics: what lies ahead?
%0 Journal Article
%D 2008
%J Biotechniques
%P 681-91
%V 44
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474045&dopt=Abstract

%A Canter MP
%A Graham CA
%A Heit MH
%A Blackwell LS
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%A Klein JB
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%T Proteomic techniques identify urine proteins that differentiate patients with interstitial cystitis from asymptomatic control subjects
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%A Solomon KR
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%T Proteomics 2008, a day of information and inspiration at Children's Hospital Boston
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%A Cunzhong Yuan
%A Liyan Jiao
%A Leilei Yang
%A Wantao Ying
%A Zhishang Hu
%A Jinfeng Liu
%A Fang Cui
%A Lei Li
%A Linyi Qian
%A Yan Teng
%A Haiying Hang
%A Xiaohong Qian
%A Xiao Yang
%T The up-regulation of 14-3-3 proteins in Smad4 deficient epidermis and hair follicles at catagen
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%U http://dx.doi.org/10.1002/pmic.200700760

%A Beveridge JD
%A Mitchell GB
%A Brewer D
%A Clark ME
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%T Altered protein expression in neutrophils of calves treated with dexamethasone
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%A Axel Gödecke
%A Jürgen Schrader
%A Michael Reinartz
%T Nitric oxide-mediated protein modification in cardiovascular physiology and pathology
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%U http://dx.doi.org/10.1002/prca.200780079

%A Li K
%A Xu C
%A Li Z
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%A Zhang J
%T Comparative proteome analyses of phosphorus responses in maize (Zea mays L.) roots of wild-type and low-P tolerant mutant reveal root characteristics associated with P-efficiency
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%A Maimaitiyiming M
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%T Biochemical characterization of membrane-associated septin from rat brain
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%8 May 3, 2008

%A Allen E. Haddrell
%A Stephen van Eeden
%A George R. Agnes
%T MALDI-MS Monitoring of Differential Biomolecule Secretion from Human Lung Cells in Vitro Following Incubation with <150 Particles
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%U http://dx.doi.org/10.1021/pr700602q

%A Fournier I
%A Wisztorski M
%A Salzet M
%T Tissue imaging using MALDI-MS: a new frontier of histopathology proteomics
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%U http://dx.doi.org/10.1586/14789450.5.3.413

%A Roland A. Pache
%A Patrick Aloy
%T Incorporating high-throughput proteomics experiments into structural biology pipelines: Identification of the low-hanging fruits
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%U http://dx.doi.org/10.1002/pmic.200700966

%A Nicolas Bousette
%A Anthony O. Gramolini
%A Thomas Kislinger
%T Proteomics-based investigations of animal models of disease
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%U http://dx.doi.org/10.1002/prca.200780043

%A Jung J
%A Ahn YJ
%A Kang LW
%T A Novel Approach to Investigating Protein/Protein Interactions and Their Functions by TAP-tagged Yeast Strains and its Application to Examine Yeast Transcription Machinery
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%A Tissot JD
%A Lion N
%T Clinical proteomics: From diagnosis to therapy. By J. E. Van Eyk and M. J. Dunn (Eds.)
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%A Cesareni G
%T Domains mediate protein-protein interactions and nucleate protein assemblies
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%A Raberg M
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%T Ralstonia eutropha H16 changes flagellation according to nutrient supply and state of poly(3-hydroxybutyrate) accumulation
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%A Wu K
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%A Ju X
%A Popov VM
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%A Lisanti MP
%A Casola A
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%T Dachshund inhibits oncogene-induced breast cancer cellular migration and invasion through suppression of interleukin-8
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%A Seeley EH
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%A Mi D
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%T Enhancement of Protein Sensitivity for MALDI Imaging Mass Spectrometry After Chemical Treatment of Tissue Sections
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%A Qiang Zhao
%A Xing-Fang Li
%A X. Chris Le
%T Aptamer-Modified Monolithic Capillary Chromatography for Protein Separation and Detection
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%A Manzano C
%A Abraham Z
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%A Del Pozo JC
%T Identification of ubiquitinated proteins in Arabidopsis
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%A John Mark Reddish
%A Normand St-Pierre
%A Andy Nichols
%A Kari Green-Church
%A Macdonald Wick
%T Proteomic analysis of proteins associated with body mass and length in yellow perch, Perca flavescens
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200700533

%A Sergej Skvortsov
%A Bettina Sarg
%A Herbert Lindner
%A Peter Lukas
%A Wolfgang Hilbe
%A Heinz Zwierzina
%A Ira Skvortsova
%T Cetuximab inhibits thymidylate synthase in colorectal cells expressing epidermal growth factor receptor
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%J PROTEOMICS - CLINICAL APPLICATIONS
%P 908-914
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%U http://dx.doi.org/10.1002/prca.200780034

%A Goodison S
%A Urquidi V
%T Breast tumor metastasis: analysis via proteomic profiling
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%U http://dx.doi.org/10.1586/14789450.5.3.457

%A Khoudoli GA
%A Gillespie PJ
%A Stewart G
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%A Swedlow JR
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%T Temporal Profiling of the Chromatin Proteome Reveals System-wide Responses to Replication Inhibition
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%A Sugiyama N
%A Nakagami H
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%A Daudi A
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%A Ishihama Y
%T Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis
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%A Nossov V
%A Amneus M
%A Su F
%A Lang J
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%A Reddy ST
%A Farias-Eisner R
%T The early detection of ovarian cancer: from traditional methods to proteomics. Can we really do better than serum CA-125?
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%A Uhlén M
%T Affinity as a tool in life science
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%A Bobby F. Assiddiq
%A Ambrosius P. L. Snijders
%A Poh Kuan Chong
%A Phillip C. Wright
%A Mark. J. Dickman
%T Identification and Characterization of Sulfolobus solfataricus P2 Proteome Using Multidimensional Liquid Phase Protein Separations
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%P 2253-2261
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%U http://dx.doi.org/10.1021/pr7006472

%A Fernanda Zanolli Freitas
%A Alex Chapeaurouge
%A Jonas Perales
%A Maria Célia Bertolini
%T A systematic approach to identify STRE-binding proteins of the gsn glycogen synthase gene promoter in Neurospora crassa
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200700921

%A Mathy G
%A Sluse FE
%T Mitochondrial comparative proteomics: Strengths and pitfalls
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%8 May 3, 2008

%A Xiao-Xia Xia
%A Mee-Jung Han
%A Sang Yup Lee
%A Jong-Shin Yoo
%T Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200700826

%A Sanchez B
%A Ruiz L
%A Reyes-Gavilan CG
%A Margolles A
%T Proteomics of stress response in Bifidobacterium
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%A Brozkova K
%A Budinska E
%A Bouchal P
%A Hernychova L
%A Knoflickova D
%A Valik D
%A Vyzula R
%A Vojtesek B
%A Nenutil R
%T SELDI-TOF proteomic profiling of breast carcinomas identifies clinicopathologically relevant groups of patients similar to previously defined clusters from cDNA expression
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%A Nguyen MT
%A Dent CL
%A Ross GF
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%A Mitsnefes MM
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%T Urinary aprotinin as a predictor of acute kidney injury after cardiac surgery in children receiving aprotinin therapy
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%A Efstathia Kitsou
%A Sheng Pan
%A JianPeng Zhang
%A Min Shi
%A Aram Zabeti
%A Dennis W. Dickson
%A Roger Albin
%A Marla Gearing
%A Daniel T. Kashima
%A Yan Wang
%A Richard P. Beyer
%A Yong Zhou
%A Catherine Pan
%A W. Michael Caudle
%A Jing Zhang
%T Identification of proteins in human substantia nigra
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%U http://dx.doi.org/10.1002/prca.200800028

%A Anpan Han
%A Marc Creus
%A Gregor Schürmann
%A Vincent Linder
%A Thomas R. Ward
%A Nico F. de Rooij
%A Urs Staufer
%T Label-Free Detection of Single Protein Molecules and Protein−Protein Interactions Using Synthetic Nanopores
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%J ANALYTICAL CHEMISTRY
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%U http://dx.doi.org/10.1021/ac7025207

%A Milli A
%A Cecconi D
%A Campostrini N
%A Timperio AM
%A Zolla L
%A Righetti SC
%A Zunino F
%A Perego P
%A Benedetti V
%A Gatti L
%A Odreman F
%A Vindigni A
%A Righetti PG
%T A proteomic approach for evaluating the cell response to a novel histone deacetylase inhibitor in colon cancer cells
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%A Messana I
%A Inzitari R
%A Fanali C
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%T Facts and artifacts in proteomics of body fluids. What proteomics of saliva is telling us?
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%A Reinhardt TA
%A Lippolis JD
%T Developmental changes in the milk fat globule membrane proteome during the transition from colostrum to milk
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%J J Dairy Sci
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%A Veenstra TD
%A Marcus K
%T Multidimensional advancement of neuroproteomics
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%J Expert Rev Proteomics
%P 149-51
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%U http://dx.doi.org/10.1586/14789450.5.2.149

%A Jikun Liu
%A Shuang Yang
%A Cheng S. Lee
%A Don L. DeVoe
%T Polyacrylamide gel plugs enabling 2-D microfluidic protein separations via isoelectric focusing and multiplexed sodium dodecyl sulfate gel electrophoresis
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%J ELECTROPHORESIS
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%U http://dx.doi.org/10.1002/elps.200700608

%A Pan J
%A Chen HQ
%A Sun YH
%A Zhang JH
%A Luo XY
%T Comparative Proteomic Analysis of Non-small-cell Lung Cancer and Normal Controls Using Serum Label-Free Quantitative Shotgun Technology
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%J Lung
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%A Zheying Zhu
%A Alan R. Boobis
%A Robert J. Edwards
%T Identification of estrogen-responsive proteins in MCF-7 human breast cancer cells using label-free quantitative proteomics
%0 Journal Article
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200700901

%A Johan Ingvarsson
%A Christer Wingren
%A Anders Carlsson
%A Peter Ellmark
%A Britta Wahren
%A Gunnel Engström
%A Ulrika Harmenberg
%A Morten Krogh
%A Carsten Peterson
%A Carl A. K. Borrebaeck
%T Detection of pancreatic cancer using antibody microarray-based serum protein profiling
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200701167

%A Sandoval WN
%A Pham V
%A Ingle ES
%A Liu PS
%A Lill JR
%T Applications of microwave-assisted proteomics in biotechnology
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%A Skalnikova H
%A Vodicka P
%A Gadher SJ
%A Kovarova H
%T Proteomics of neural stem cells
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%J Expert Rev Proteomics
%P 175-86
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%U http://dx.doi.org/10.1586/14789450.5.2.175

%A Fox JW
%A Serrano SM
%T Insights into and speculations about snake venom metalloproteinase (SVMP) synthesis, folding and disulfide bond formation and their contribution to venom complexity
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%U http://dx.doi.org/10.1111/j.1742-4658.2008.06466.x

%A Janosch Hennig
%A Klaus D. M. Hennig
%A Maria Sunnerhagen
%T MTMDAT: Automated analysis and visualization of mass spectrometry data for tertiary and quaternary structure probing of proteins
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%J Bioinformatics
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%A Klawitter J
%A Rivard CJ
%A Brown LM
%A Capasso JM
%A Almeida NE
%A Maunsbach AB
%A Pihakaski-Maunsbach K
%A Berl T
%A Leibfritz D
%A Christians U
%A Chan L
%T A Metabonomic and Proteomic Analysis of Changes in IMCD3 Cells Chronically Adapted to Hypertonicity
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%J Nephron Physiol
%P p1-p10
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%A Crossett B
%A Edwards AV
%A White MY
%A Cordwell SJ
%T Statistical analysis of image data provided by two-dimensional gel electrophoresis for discovery proteomics
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%J Methods Mol Med
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%A Takatoshi Nakagawa
%A Eiji Miyoshi
%A Takayuki Yakushijin
%A Naoki Hiramatsu
%A Takumi Igura
%A Norio Hayashi
%A Naoyuki Taniguchi
%A Akihiro Kondo
%T Glycomic Analysis of Alpha-Fetoprotein L3 in Hepatoma Cell Lines and Hepatocellular Carcinoma Patients
%0 Journal Article
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%J JOURNAL OF PROTEOME RESEARCH
%P 2222-2233
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%U http://dx.doi.org/10.1021/pr700841q

%A Picciani R
%A Junk AK
%A Bhattacharya SK
%T Technical Brief: a novel strategy for enrichment of trabecular meshwork protease proteome
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%A Araujo RP
%A Petricoin EF
%A Liotta LA
%T Critical dependence of blood-borne biomarker concentrations on the half-lives of their carrier proteins
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%A Guo D
%A Tan W
%A Wang F
%A Lv Z
%A Hu J
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%A Chen Q
%A Gu X
%A Wan B
%A Zhang Z
%T Proteomic analysis of human articular cartilage: Identification of differentially expressed proteins in knee osteoarthritis
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%J Joint Bone Spine
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%8 May 10, 2008

%A Zhang Y
%A Wu JF
%A Zeyer J
%A Meng B
%A Liu L
%A Jiang CY
%A Liu SQ
%A Liu SJ
%T Proteomic and molecular investigation on the physiological adaptation of Comamonas sp. strain CNB-1 growing on 4-chloronitrobenzene
%0 Journal Article
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%J Biodegradation
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%8 May 29, 2008

%A Isserlin R
%A Emili A
%T Interpretation of large-scale quantitative shotgun proteomic profiles for biomarker discovery
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%J Curr Opin Mol Ther
%P 231-42
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%A Mezhoud K
%A Praseuth D
%A Francois JC
%A Bernard C
%A Edery M
%T Global quantitative analysis of protein phosphorylation status in fish exposed to microcystin
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%J Adv Exp Med Biol
%P 419-26
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%A Bruno Lomonte
%A José Escolano
%A Julián Fernández
%A Libia Sanz
%A Yamileth Angulo
%A José María Gutiérrez
%A Juan J. Calvete
%T Snake Venomics and Antivenomics of the Arboreal Neotropical Pitvipers Bothriechis lateralis and Bothriechis schlegelii
%0 Journal Article
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%J JOURNAL OF PROTEOME RESEARCH
%P 2445-2457
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%U http://dx.doi.org/10.1021/pr8000139

%A Daniele Vergara
%A Fernanda Chiriacò
%A Raffaele Acierno
%A Michele Maffia
%T Proteomic map of peripheral blood mononuclear cells
%0 Journal Article
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%J PROTEOMICS
%P 2045-2051
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%U http://dx.doi.org/10.1002/pmic.200700726

%A Gerszten RE
%A Accurso FJ
%A Bernard GR
%A Caprioli RM
%A Klee EW
%A Klee GG
%A Kullo IJ
%A Laguna TA
%A Roth FP
%A Sabatine M
%A Srinivas P
%A Wang TJ
%A Ware LB
%T Challenges in Translating Plasma Proteomics from Bench to Bedside: Update from the NHLBI Clinical Proteomics Programs
%0 Journal Article
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%J Am J Physiol Lung Cell Mol Physiol
%P -
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%8 May 2, 2008

%A Garfin DE
%T 24th Annual Meeting of the American Electrophoresis Society
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%J Expert Rev Proteomics
%P 385-7
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%U http://dx.doi.org/10.1586/14789450.5.3.385

%A Mohit Raja Jain
%A Wei-wen Ge
%A Stella Elkabes
%A Hong Li
%T Amyotrophic lateral sclerosis: Protein chaperone dysfunction revealed by proteomic studies of animal models
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 670-684
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780023

%A Wei Gu
%A Li-Xia Zou
%A Peng-Fei Shan
%A Yi-Ding Chen
%T Analysis of urinary proteomic patterns for diabetic nephropathy by ProteinChip
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 744-750
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780083

%A Pang CN
%A Wilkins MR
%T Online resources for the molecular contextualization of disease
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%D 2008
%J Methods Mol Med
%P 287-308
%V 141
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%A Portelius E
%A Zetterberg H
%A Gobom J
%A Andreasson U
%A Blennow K
%T Targeted proteomics in Alzheimer's disease: focus on amyloid-beta
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%D 2008
%J Expert Rev Proteomics
%P 225-37
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.225

%A Brick K
%A Pizzi E
%T A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
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%A Sedgwick H
%A Caron F
%A Monaghan PB
%A Kolch W
%A Cooper JM
%T Lab-on-a-chip technologies for proteomic analysis from isolated cells
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%8 Jun 5, 2008

%A Mu J
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%T Proteomic analysis of a rat model of depression
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%D 2008
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%P 315-20
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.315

%A Feng J
%A Lawson MA
%A Melamed P
%T A Proteomic Comparison of Immature and Mature Gonadotrophs in Mice Reveals Novel Differentially Expressed Nuclear Proteins That Regulate Gonadotropin Gene Transcription and RNA Splicing
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%J Biol Reprod
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%8 May 14, 2008

%A Galetskiy D
%A Susnea I
%A Reiser V
%A Adamska I
%A Przybylski M
%T Structure and Dynamics of Photosystem II Light-Harvesting Complex Revealed by High-Resolution FTICR Mass Spectrometric Proteome Analysis
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%8 Apr 4, 2008

%A Xia Q
%A Liao L
%A Cheng D
%A Duong DM
%A Gearing M
%A Lah JJ
%A Levey AI
%A Peng J
%T Proteomic identification of novel proteins associated with Lewy bodies
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%J Front Biosci
%P 3850-6
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%A Claus Zabel
%A Joachim Klose
%T Animal models in human disease
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%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 635-637
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200890015

%A Núria Jorba
%A Silvia Juarez
%A Eva Torreira
%A Pablo Gastaminza
%A Noelia Zamarreño
%A Juan Pablo Albar
%A Juan Ortín
%T Analysis of the interaction of influenza virus polymerase complex with human cell factors
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%D 2008
%J PROTEOMICS
%P 2077-2088
%V 8
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%U http://dx.doi.org/10.1002/pmic.200700508

%A Yin W
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%A Peerschke EI
%T Development of proteomic signatures of platelet activation using surface-enhanced laser desorption/ionization technology in a clinical setting
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%A Kovac S
%A Yang X
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%A Josic D
%T Proteomics as a tool for optimization of human plasma protein separation
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%A Shuang Lin
%A Guoping Yao
%A Dawei Qi
%A Yan Li
%A Chunhui Deng
%A Pengyuan Yang
%A Xiangmin Zhang
%T Fast and Efficient Proteolysis by Microwave-Assisted Protein Digestion Using Trypsin-Immobilized Magnetic Silica Microspheres
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 3655-3665
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%U http://dx.doi.org/10.1021/ac800023r

%A Stephan Kirsch
%A Mostafa Zarei
%A Mario Cindrić
%A Johannes Müthing
%A Laura Bindila
%A Jasna Peter-Katalinić
%T On-Line Nano-HPLC/ESI QTOF MS and Tandem MS for Separation, Detection, and Structural Elucidation of Human Erythrocytes Neutral Glycosphingolipid Mixture
%0 Journal Article
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%J ANALYTICAL CHEMISTRY
%P 4711-4722
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%U http://dx.doi.org/10.1021/ac702175f

%A Meinnel T
%A Giglione C
%T Protein lipidation meets proteomics
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%J Front Biosci
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%A Tsujita T
%A Kang D
%A Moon MH
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%T Large-scale identification by shotgun proteomics of proteins expressed in porcine liver and salivary gland
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%A Roberto Marangoni
%A Riccardo Chiarini
%A Giorgio Iannone
%A Massimiliano Salerno
%T DigesTip: A new device for a rapid and efficient in-solution protein digestion
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%J PROTEOMICS
%P 2165-2167
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%U http://dx.doi.org/10.1002/pmic.200700873

%A Jenny Forshed
%A Maria Pernemalm
%A Chuen Seng Tan
%A Marita Lindberg
%A Lena Kanter
%A Yudi Pawitan
%A Rolf Lewensohn
%A Leif Stenke
%A Janne Lehtiö
%T Proteomic Data Analysis Workflow for Discovery of Candidate Biomarker Peaks Predictive of Clinical Outcome for Patients with Acute Myeloid Leukemia
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2332-2341
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr070482e

%A Ishtiaq Ahmad
%A Wajahat M. Qazi
%A Ahmed Khurshid
%A Munir Ahmad
%A Daniel C. Hoessli
%A Iffat Khawaja
%A M. Iqbal Choudhary
%A Abdul R. Shakoori
%A Nasir-ud-Din
%T MAPRes: Mining association patterns among preferred amino acid residues in the vicinity of amino acids targeted for post-translational modifications
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 1954-1958
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%U http://dx.doi.org/10.1002/pmic.200700657

%A Hirsch J
%A Niemann CU
%A Hansen KC
%A Choi S
%A Su X
%A Frank JA
%A Fang X
%A Hirose R
%A Theodore P
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%A Burlingame AL
%A Matthay MA
%T Alterations in the proteome of pulmonary alveolar type II cells in the rat after hepatic ischemia-reperfusion
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%A Lundegaard C
%A Lamberth K
%A Harndahl M
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%A Lund O
%A Nielsen M
%T NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11
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%8 May 7, 2008

%A Poirrier JE
%A Guillonneau F
%A Renaut J
%A Sergeant K
%A Luxen A
%A Maquet P
%A Leprince P
%T Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation
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%A Solstad T
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%A Garberg H
%A Fladmark KE
%T Identification of a novel phosphorylation site of acyl-CoA binding protein (ACBP) in nodularin-induced apoptotic hepatocytes
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%U http://dx.doi.org/10.1016/j.yexcr.2008.03.014

%A Ai-Lan Cheng
%A Wei-Guo Huang
%A Zhu-Chu Chen
%A Peng-Fei Zhang
%A Mao-Yu Li
%A Feng Li
%A Jian-Ling Li
%A Cui Li
%A Hong Yi
%A Fang Peng
%A Chao-Jun Duan
%A Zhi-Qiang Xiao
%T Identificating Cathepsin D as a Biomarker for Differentiation and Prognosis of Nasopharyngeal Carcinoma by Laser Capture Microdissection and Proteomic Analysis
%0 Journal Article
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%J JOURNAL OF PROTEOME RESEARCH
%P 2415-2426
%V 7
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%U http://dx.doi.org/10.1021/pr7008548

%A Shao-Hsuan Kao
%A Hin-Kwan Wong
%A Chia-Ying Chiang
%A Han-Min Chen
%T Evaluating the compatibility of three colorimetric protein assays for two-dimensional electrophoresis experiments
%0 Journal Article
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%J PROTEOMICS
%P 2178-2184
%V 8
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%U http://dx.doi.org/10.1002/pmic.200700600

%A Bindu Nanduri
%A Pratik Shah
%A Mahalingam Ramkumar
%A Edward B. Allen
%A Edwin Swiatlo
%A Shane C. Burgess
%A Mark L. Lawrence
%T Quantitative analysis of Streptococcus pneumoniae TIGR4 response to in vitro iron restriction by 2-D LC ESI MS/MS
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%J PROTEOMICS
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%U http://dx.doi.org/10.1002/pmic.200701048

%A Hu J
%A Yan C
%T A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes
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%8 Apr 1, 2008

%A Hyoung-Joo Lee
%A Min-Seok Kwon
%A Eun-Young Lee
%A Sang Yun Cho
%A Young-Ki Paik
%T Establishment of a PF2D-MS/MS platform for rapid profiling and semiquantitative analysis of membrane protein biomarkers
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%J PROTEOMICS
%P 2168-2177
%V 8
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%U http://dx.doi.org/10.1002/pmic.200701022

%A Chen S
%A Chinnaswamy A
%A Biswas SK
%A Goryachev AB
%A Yap CK
%A Lam KY
%A Tay CP
%A Low HS
%A Pokhilko A
%A Da-Jun T
%A Mishra SK
%T Cell interaction knowledgebase: an online database for innate immune cells, cytokines and chemokines
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%P 569-74
%V 7
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%A Spurrier B
%A Honkanen P
%A Holway A
%A Kumamoto K
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%A Takenoshita S
%A Wakabayashi G
%A Austin J
%A Nishizuka S
%T Protein and lysate array technologies in cancer research
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%U http://dx.doi.org/10.1016/j.biotechadv.2008.04.002

%A [No authors listed]
%T Next issue: Mitochondria and ageing
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%A Nanduri B
%A Lawrence ML
%A Peddinti DS
%A Burgess SC
%T Effects of Subminimum Inhibitory Concentrations of Antibiotics on the Pasteurella multocida Proteome: A Systems Approach
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%A Bovenschen N
%A de Koning PJ
%A Quadir R
%A Broekhuizen R
%A Damen JM
%A Froelich CJ
%A Slijper M
%A Kummer JA
%T NK Cell Protease Granzyme M Targets {alpha}-Tubulin and Disorganizes the Microtubule Network
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%A Judith Y. M. N. Engwegen
%A Marieke Alberts
%A Jaco C. Knol
%A Connie R. Jimenez
%A Annekatrien C. T. M. Depla
%A Henriëtte Tuynman
%A Henk A. van Heukelem
%A Pleun Snel
%A Marianne E. Smits
%A Annemieke Cats
%A Jan H. M. Schellens
%A Jos H. Beijnen
%T Influence of variations in sample handling on SELDI-TOF MS serum protein profiles for colorectal cancer
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%J PROTEOMICS - CLINICAL APPLICATIONS
%P 936-945
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%U http://dx.doi.org/10.1002/prca.200780068

%A Fowler CB
%A O'Leary TJ
%A Mason JT
%T Modeling formalin fixation and histological processing with ribonuclease A: effects of ethanol dehydration on reversal of formaldehyde cross-links
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%A Lee YH
%A Chung MC
%A Lin Q
%A Boelsterli UA
%T Troglitazone-induced hepatic mitochondrial proteome expression dynamics in heterozygous Sod2(+/-) mice: Two-stage oxidative injury
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%A Walss-Bass C
%A Weintraub ST
%A Hatch J
%A Mintz J
%A Chaudhuri AR
%T Clozapine causes oxidation of proteins involved in energy metabolism: a possible mechanism for antipsychotic-induced metabolic alterations
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%8 May 9, 2008

%A Saito S
%A Murayama Y
%A Pan Y
%A Taima T
%A Fujimura T
%A Murayama K
%A Sadilek M
%A Egawa S
%A Ueno S
%A Ito A
%A Ishidoya S
%A Nakagawa H
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%A Satoh M
%A Endoh M
%A Arai Y
%T Haptoglobin-beta chain defined by monoclonal antibody RM2 as a novel serum marker for prostate cancer
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%J Int J Cancer
%P 633-40
%V 123
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%U http://dx.doi.org/10.1002/ijc.23490

%A Zhang Y
%A Gao Q
%A Duan S
%A He Y
%A Sun X
%A Jiang R
%A Duan Y
%A Zhong X
%A Ge J
%T Upregulation of Copine1 in trabecular meshwork cells of POAG patients: a membrane proteomics approach
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%J Mol Vis
%P 1028-36
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%A Miller CS
%A Eisenberg D
%T Using inferred residue contacts to distinguish between correct and incorrect protein models
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%J Bioinformatics
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%8 May 29, 2008

%A Sigdel TK
%A Lau K
%A Schilling J
%A Sarwal M
%T Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation
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%J Clin Transplant
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%8 May 3, 2008

%A Thimon V
%A Frenette G
%A Saez F
%A Thabet M
%A Sullivan R
%T Protein composition of human epididymosomes collected during surgical vasectomy reversal: aproteomic and genomic approach
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%J Hum Reprod
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%8 May 14, 2008

%A Yuanyuan Lu
%A Xin Wang
%A Zhenxiong Liu
%A Bin Jin
%A Dake Chu
%A Huihong Zhai
%A Faming Zhang
%A Kai Li
%A Gui Ren
%A Antonio Miranda-Vizuete
%A Xuegang Guo
%A Daiming Fan
%T Identification and distribution of thioredoxin-like 2 as the antigen for the monoclonal antibody MC3 specific to colorectal cancer
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2220-2229
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200700770

%A Javad Nazarian
%A Mariarita Santi
%A Yetrib Hathout
%A Tobey J. MacDonald
%T Protein profiling of formalin fixed paraffin embedded tissue: Identification of potential biomarkers for pediatric brainstem glioma
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 915-924
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780061

%A Wenhai Jin
%A Anna T. Brown
%A Anne M. Murphy
%T Cardiac myofilaments: from proteome to pathophysiology
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 800-810
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780075

%A Justin Newberg and Robert F. Murphy
%T A Framework for the Automated Analysis of Subcellular Patterns in Human Protein Atlas Images
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2300-2308
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr7007626

%A Cheon MS
%A Suh JK
%A Kim MJ
%A Kim SH
%A Lee K
%T Identification of differentially expressed proteins in the heart of translationally controlled tumor protein over-expressing transgenic mice
%0 Journal Article
%D 2008
%J Biomed Chromatogr
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%8 May 27, 2008

%A Annette Dreisbach
%A Andreas Otto
%A Dörte Becher
%A Elke Hammer
%A Alexander Teumer
%A Joost W. Gouw
%A Michael Hecker
%A Uwe Völker
%T Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2062-2076
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200701081

%A Kudva
%A Indira T.; John
%A Manohar
%T Proteomics-Based Expression Library Screening (PELS): A Functional Proteomics Tool for Rapid Discovery of Immunogenic Pathogen-Specific Markers of Host Infection
%0 Journal Article
%D 2008
%J Current Proteomics
%P 1-9
%V 5
%N 1
%U http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00001 

%A Lion N
%A Tissot JD
%T Application of proteomics to hematology: the revolution is starting
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%D 2008
%J Expert Rev Proteomics
%P 375-9
%V 5
%N 3
%U http://dx.doi.org/10.1586/14789450.5.3.375

%A Felix Cleemann and Peter Karuso
%T Fluorescence Anisotropy Assay for the Traceless Kinetic Analysis of Protein Digestion
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4170-4174
%V 80
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%U http://dx.doi.org/10.1021/ac7025783

%A Lobley AE
%A Nugent T
%A Orengo CA
%A Jones DT
%T FFPred: an integrated feature-based function prediction server for vertebrate proteomes
%0 Journal Article
%D 2008
%J Nucleic Acids Res
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%U http://dx.doi.org/10.1093/nar/gkn193
%8 May 7, 2008

%A Carlos Priminho Pirovani
%A Heliana Argôlo Santos Carvalho
%A Regina Cele Reboucas Machado
%A Dayane Santos Gomes
%A Fátima Cerqueira Alvim
%A Alan William Vilela Pomella
%A Karina Peres Gramacho
%A Júlio Cézar de Mattos Cascardo
%A Gonçalo Amarante Guimarães Pereira
%A Fa
%T Protein extraction for proteome analysis from cacao leaves and meristems, organs infected by Moniliophthora perniciosa, the causal agent of the witches' broom disease
%0 Journal Article
%D 2008
%J ELECTROPHORESIS
%P 2391-2401
%V 29
%N 11
%U http://dx.doi.org/10.1002/elps.200700743

%A Mélanie Delannoy
%A Georges Alves
%A Didier Vertommen
%A Julian Ma
%A Marc Boutry
%A Catherine Navarre
%T Identification of peptidases in Nicotiana tabacum leaf intercellular fluid
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2285-2298
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200700507

%A Dong M
%A Ding G
%A Zhou J
%A Wang H
%A Zhao Y
%A Huang H
%T The Effect of Trophoblasts on T Lymphocytes: Possible Regulatory Effector Molecules - A Proteomic Analysis
%0 Journal Article
%D 2008
%J Cell Physiol Biochem
%P 463-472
%V 21
%N 5-6
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453754&dopt=Abstract

%A Li Z
%A Barajas D
%A Panavas T
%A Herbst DA
%A Nagy PD
%T Cdc34p ubiquitin-conjugating enzyme is a component of the tombusvirus replicase complex and ubiquitinates p33 replication protein
%0 Journal Article
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%J J Virol
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%U http://dx.doi.org/10.1128/JVI.00702-08
%8 May 7, 2008

%A Hernández-Torres F
%A Pedrajas JR
%A Aránega AE
%A Navarro F
%T Expression in bacteria of small and specific protein domains of two transcription factor isoforms, purification and monospecific polyclonal antibodies generation, by a two-step affinity chromatography procedure
%0 Journal Article
%D 2008
%J Protein Expr Purif
%P -
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%U http://dx.doi.org/10.1016/j.pep.2008.03.015
%8 Mar 28, 2008

%A Karlheinz Mann
%T Proteomic analysis of the chicken egg vitelline membrane
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2322-2332
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200800032

%A Jun Zhang
%A David A. Liem
%A Michael Mueller
%A Yueju Wang
%A Chenggong Zong
%A Ning Deng
%A Thomas M. Vondriska
%A Paavo Korge
%A Oliver Drews
%A W. Robb MacLellan
%A Henry Honda
%A James N. Weiss
%A Rolf Apweiler
%A Peipei Ping
%T Altered Proteome Biology of Cardiac Mitochondria Under Stress Conditions
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2204-2214
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr070371f

%A Arthur JW
%T Identification and characterization of microbial proteins using peptide mass fingerprinting strategies
%0 Journal Article
%D 2008
%J Methods Mol Med
%P 257-70
%V 141
%N 
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453094&dopt=Abstract

%A Kawai A
%A Kondo T
%A Suehara Y
%A Kikuta K
%A Hirohashi S
%T Global Protein-expression Analysis of Bone and Soft Tissue Sarcomas
%0 Journal Article
%D 2008
%J Clin Orthop Relat Res
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s11999-008-0330-4
%8 Jun 6, 2008

%A C. Logan Mackay
%A Bernard Ramsahoye
%A Karl Burgess
%A Ken Cook
%A Stefan Weidt
%A James Creanor
%A David Harrison
%A Pat Langridge-Smith
%A Ted Hupp
%A Larry Hayward
%T Sensitive, Specific, and Quantitative FTICR Mass Spectrometry of Combinatorial Post-Translational Modifications in Intact Histone H4
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4147-4153
%V 80
%N 11
%U http://dx.doi.org/10.1021/ac702452d

%A Lefranc MP
%T IMGT((R)), the International ImMunoGeneTics Information System((R) )for Immunoinformatics : Methods for Querying IMGT((R)) Databases, Tools, and Web Resources in the Context of Immunoinformatics
%0 Journal Article
%D 2008
%J Mol Biotechnol
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s12033-008-9062-7
%8 May 8, 2008

%A Lorna M. Cryan
%A Colm O'Brien
%T Proteomics as a research tool in clinical and experimental ophthalmology
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 762-775
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780094

%A Nikki P. Y. Lee
%A Kar-wai Leung
%A Nicole Cheung
%A Brian Y. Lam
%A Michelle Z. Xu
%A Pak C. Sham
%A George K. Lau
%A Ronnie T. P. Poon
%A Sheung Tat Fan
%A John M. Luk
%T Comparative proteomic analysis of mouse livers from embryo to adult reveals an association with progression of hepatocellular carcinoma
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2136-2149
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200700590

%A Schilling O
%A Overall CM
%T Proteome-derived, database-searchable peptide libraries for identifying protease cleavage sites
%0 Journal Article
%D 2008
%J Nat Biotechnol
%P 685-94
%V 26
%N 6
%U http://dx.doi.org/10.1038/nbt1408

%A Wiśniewski JR
%A Zougman A
%A Krüger S
%A Ziółkowski P
%A Pudełko M
%A Bębenek M
%A Mann M
%T Constitutive and dynamic phosphorylation and acetylation sites on NUCKS, a hypermodified nuclear protein, studied by quantitative proteomics
%0 Journal Article
%D 
%J 
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%A Jayanthi S
%A Buie S
%A Moore S
%A Herning RI
%A Better W
%A Wilson NM
%A Contoreggi C
%A Cadet JL
%T Heavy marijuana users show increased serum apolipoprotein C-III levels: evidence from proteomic analyses
%0 Journal Article
%D 2008
%J Mol Psychiatry
%P -
%V 
%N 
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%8 May 13, 2008

%A Baukje de Roos
%A Anouk Geelen
%A Karen Ross
%A Garry Rucklidge
%A Martin Reid
%A Gary Duncan
%A Muriel Caslake
%A Graham Horgan
%A Ingeborg A. Brouwer
%T Identification of potential serum biomarkers of inflammation and lipid modulation that are altered by fish oil supplementation in healthy volunteers
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 1965-1974
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200700457

%A Allen Bosley
%A Heather N. Marshall
%A Yunden Badralmaa
%A Ven Natarajan
%T A method of HIV-1 inactivation compatible with antibody-based depletion of abundant proteins from plasma
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 904-907
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780086

%A de Souza DM
%A Oliveira BM
%A Castro-Dias E
%A Winck FV
%A Horiuchi RS
%A Baldasso PA
%A Caetano HT
%A Pires NK
%A Marangoni S
%A Novello JC
%T The untiring search for the most complete proteome representation: reviewing the methods
%0 Journal Article
%D 2008
%J Brief Funct Genomic Proteomic
%P -
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%N 
%U http://dx.doi.org/10.1093/bfgp/eln023
%8 May 29, 2008

%A Butler GS
%A Dean RA
%A Tam EM
%A Overall CM
%T Pharmacoproteomics of a metalloproteinase hydroxamate inhibitor in breast cancer cells: Dynamics of matrix metalloproteinase-14 (MT1-MMP) mediated membrane protein shedding
%0 Journal Article
%D 2008
%J Mol Cell Biol
%P -
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%U http://dx.doi.org/10.1128/MCB.01775-07
%8 May 27, 2008

%A Chun-Wei Hsu
%A Hsueh-Fen Juan
%A Hsuan-Cheng Huang
%T Characterization of microRNA-regulated protein-protein interaction network
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 1975-1979
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200701004

%A Prieto DA
%A Ye X
%A Veenstra TD
%T Proteomic analysis of traumatic brain injury: the search for biomarkers
%0 Journal Article
%D 2008
%J Expert Rev Proteomics
%P 283-91
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.283

%A Sarma AD
%A Oehrle NW
%A Emerich DW
%T Plant protein isolation and stabilization for enhanced resolution of two-dimensional polyacrylamide gel electrophoresis
%0 Journal Article
%D 2008
%J Anal Biochem
%P -
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%N 
%U http://dx.doi.org/10.1016/j.ab.2008.04.047
%8 May 8, 2008

%A Raina N. Fichorova
%A Nicola Richardson-Harman
%A Massimo Alfano
%A Laurent Belec
%A Cedric Carbonneil
%A Silvia Chen
%A Lisa Cosentino
%A Kelly Curtis
%A Charlene S. Dezzutti
%A Betty Donoval
%A Gustavo F. Doncel
%A Melissa Donaghay
%A Jean-Charles Grivel
%A Esmeralda Guzman
%A Mad
%T Biological and Technical Variables Affecting Immunoassay Recovery of Cytokines from Human Serum and Simulated Vaginal Fluid: A Multicenter Study
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4741-4751
%V 80
%N 12
%U http://dx.doi.org/10.1021/ac702628q

%A Paolo Conrotto
%A Ulf Hellman
%T Lys Tag: an easy and robust chemical modification for improved de novo sequencing with a matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometer
%0 Journal Article
%D 2008
%J Rapid Communications in Mass Spectrometry
%P 1823-1833
%V 22
%N 12
%U http://dx.doi.org/10.1002/rcm.3555

%A Barba de la Rosa AP
%A Lugo-Melchor OY
%A Briones-Cerecero EP
%A Chagolla-López A
%A De León-Rodríguez A
%A Santos L
%A Vázquez-Ortiz G
%A Salcedo M
%T Analysis of human serum from women affected by cervical lesions
%0 Journal Article
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%J J Exp Ther Oncol
%P 65-72
%V 7
%N 1
%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18472643&dopt=Abstract

%A Ryan K
%A Bauer DL
%T Finishing touches: Post-translational modification of protein factors involved in mammalian pre-mRNA 3' end formation
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%D 2008
%J Int J Biochem Cell Biol
%P -
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%8 Apr 1, 2008

%A Hutchinson TH
%A Mahshid Y
%A Jönsson R
%A Björklund C
%A Kenne K
%T Proteomic analysis of phospholipidosis in citalopram treated U937 cells - Support for the cholesterol biosynthesis hypothesis
%0 Journal Article
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%A John H. Beattie
%A Margaret-Jane Gordon
%A Garry J. Rucklidge
%A Martin D. Reid
%A Gary J. Duncan
%A Graham W. Horgan
%A Young-Eun Cho
%A In-Sook Kwun
%T Aorta protein networks in marginal and acute zinc deficiency
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2126-2135
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200700784

%A Ou J
%A Walczysko P
%A Kucerova R
%A Rajnicek A
%A McCaig C
%A Zhao M
%A Collinson J
%T Chronic wound state exacerbated by oxidative stress in Pax6(+/-) aniridia-related keratopathy
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%A Leesa J. Deterding
%A Maureen K. Bunger
%A Geoffrey C. Banks
%A Kenneth B. Tomer
%A Trevor K. Archer
%T Global Changes in and Characterization of Specific Sites of Phosphorylation in Mouse and Human Histone H1 Isoforms upon CDK Inhibitor Treatment Using Mass Spectrometry
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2368-2379
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700790a

%A Michelle Mintz
%A Adeline Vanderver
%A Kristy J. Brown
%A Joseph Lin
%A Zuyi Wang
%A Christine Kaneski
%A Raphael Schiffmann
%A Kanneboyina Nagaraju
%A Eric P. Hoffman
%A Yetrib Hathout
%T Time Series Proteome Profiling To Study Endoplasmic Reticulum Stress Response
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2435-2444
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr700842m

%A Titz B
%A Rajagopala SV
%A Goll J
%A Häuser R
%A McKevitt MT
%A Palzkill T
%A Uetz P
%T The binary protein interactome of Treponema pallidum--the syphilis spirochete
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%A Ye H
%A Wang A
%A Lee BS
%A Yu T
%A Sheng S
%A Peng T
%A Hu S
%A Crowe DL
%A Zhou X
%T Proteomic Based Identification of Manganese Superoxide Dismutase 2 (SOD2) as a Metastasis Marker for Oral Squamous Cell Carcinoma
%0 Journal Article
%D 2008
%J Cancer Genomics Proteomics
%P 85-94
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18460737&dopt=Abstract

%A Lorenzo Fulgentini
%A Roberto Marangoni
%A Giuliano Colombetti
%T Optimizing soluble protein extraction and two-dimensional polyacrylamide gel electrophoresis quality for extremophile ciliates
%0 Journal Article
%D 2008
%J ELECTROPHORESIS
%P 2411-2412
%V 29
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%U http://dx.doi.org/10.1002/elps.200700838

%A Liu
%A Wei; Wang
%A Jin-Ye
%T Protein Modification by Peroxidative Products of Polyunsaturated Fatty Acids
%0 Journal Article
%D 2008
%J Current Proteomics
%P 62-72
%V 5
%N 1
%U http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00006 

%A Lu Q
%A Murugesan N
%A Macdonald JA
%A Wu SL
%A Pachter JS
%A Hancock WS
%T Analysis of mouse brain microvascular endothelium using immuno-laser capture microdissection coupled to a hybrid linear ion trap with Fourier transform-mass spectrometry proteomics platform
%0 Journal Article
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%J Electrophoresis
%P -
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%8 May 16, 2008

%A D'Ambrosio C
%A Mandrich L
%A Rossi M
%A Scaloni A
%A Manco G
%T A Proteomic Approach to Study Escherichia coli. Acetyl Esterase Interactors Unveil a Sequence Motif Involved in Protein-Protein Interaction
%0 Journal Article
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%J Protein Pept Lett
%P 333-40
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473943&dopt=Abstract

%A Jagroop Pandhal
%A Ambrosius P. L. Snijders
%A Phillip C. Wright
%A Catherine A. Biggs
%T A cross-species quantitative proteomic study of salt adaptation in a halotolerant environmental isolate using 15N metabolic labelling
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2266-2284
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200700398

%A Ramachandran N
%A Raphael JV
%A Hainsworth E
%A Demirkan G
%A Fuentes MG
%A Rolfs A
%A Hu Y
%A Labaer J
%T Next-generation high-density self-assembling functional protein arrays
%0 Journal Article
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%J Nat Methods
%P 535-8
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%U http://dx.doi.org/10.1038/nmeth.1210

%A Zhang Q
%A Menon R
%A Deutsch EW
%A Pitteri SJ
%A Faca VM
%A Wang H
%A Newcomb LF
%A Depinho RA
%A Bardeesy N
%A Dinulescu D
%A Hung KE
%A Kucherlapati R
%A Jacks T
%A Politi K
%A Aebersold R
%A Omenn GS
%A States DJ
%A Hanash SM
%T A mouse plasma PeptideAtlas as a resource for disease proteomics
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%A Chao Yuan
%A R. John Solaro
%T Myofilament proteins: From cardiac disorders to proteomic changes
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 788-799
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%N 6
%U http://dx.doi.org/10.1002/prca.200780076

%A Hiroki Kuyama
%A Kazuhiro Sonomura
%A Keisuke Shima
%A Osamu Nishimura
%A Susumu Tsunasawa
%T An improved method for de novo sequencing of arginine-containing, N?-tris(2,4,6-trimethoxyphenyl)phosphonium-acetylated peptides
%0 Journal Article
%D 2008
%J Rapid Communications in Mass Spectrometry
%P 2063-2072
%V 22
%N 13
%U http://dx.doi.org/10.1002/rcm.3587

%A Burniston JG
%T Changes in the rat skeletal muscle proteome induced by moderate-intensity endurance exercise
%0 Journal Article
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%J Biochim Biophys Acta
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%8 Apr 24, 2008

%A Matsumoto H
%A Matsumoto I
%T Alcoholism: protein expression profiles in a human hippocampal model
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%J Expert Rev Proteomics
%P 321-31
%V 5
%N 2
%U http://dx.doi.org/10.1586/14789450.5.2.321

%A Tyler CD
%A Lichti CF
%A Diekman AB
%A Foley SL
%T Evaluation of differentially expressed proteins following serum exposure in avian pathogenic Escherichia coli
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%J Avian Dis
%P 23-7
%V 52
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18459291&dopt=Abstract

%A W. Robb MacLellan
%A Yibin Wang
%A Thomas M. Vondriska
%A James N. Weiss
%A Peipei Ping
%T Proteomic insights into cardiac cell death and survival
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 837-844
%V 2
%N 6
%U http://dx.doi.org/10.1002/prca.200780121

%A Caroline Solazzo
%A William W. Fitzhugh
%A Christian Rolando
%A Caroline Tokarski
%T Identification of Protein Remains in Archaeological Potsherds by Proteomics
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4590-4597
%V 80
%N 12
%U http://dx.doi.org/10.1021/ac800515v

%A Michael Hamacher
%A Martin Eisenacher
%A Florian Tribl
%A Christian Stephan
%A Katrin Marcus
%A Tanja Hardt
%A Jens Wiltfang
%A Lennart Martens
%A Dominic Desiderio
%A Howard Gutstein
%A Young Mok Park
%A Helmut E. Meyer
%T The HUPO Brain Proteome Project Wish List - Summary of the 9th HUPO BPP Workshop 9-10 January 2008, Barbados
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2160-2164
%V 8
%N 11
%U http://dx.doi.org/10.1002/pmic.200800090

%A Kirchner L
%A Chen WQ
%A Afjehi-Sadat L
%A Viidik A
%A Skalicky M
%A Höger H
%A Lubec G
%T Hippocampal metabolic proteins are modulated in voluntary and treadmill exercise rats
%0 Journal Article
%D 2008
%J Exp Neurol
%P 145-51
%V 212
%N 1
%U http://dx.doi.org/10.1016/j.expneurol.2008.03.014

%A Delbosc S
%A Haloui M
%A Louedec L
%A Dupuis M
%A Cubizolles M
%A Podust VN
%A Fung ET
%A Michel JB
%A Meilhac O
%T Proteomic analysis permits the identification of new biomarkers of arterial wall remodeling in hypertension
%0 Journal Article
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%A Moore JC
%A Fu J
%A Chan YC
%A Lin D
%A Tran H
%A Tse HF
%A Li RA
%T Distinct cardiogenic preferences of two human embryonic stem cell (hESC) lines are imprinted in their proteomes in the pluripotent state
%0 Journal Article
%D 2008
%J Biochem Biophys Res Commun
%P -
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%8 May 23, 2008

%A Matthew J. Linman
%A Joseph D. Taylor
%A Hai Yu
%A Xi Chen
%A Quan Cheng
%T Surface Plasmon Resonance Study of Protein−Carbohydrate Interactions Using Biotinylated Sialosides
%0 Journal Article
%D 2008
%J ANALYTICAL CHEMISTRY
%P 4007-4013
%V 80
%N 11
%U http://dx.doi.org/10.1021/ac702566e

%A Anthony Fardet
%A Rafael Llorach
%A Jean-François Martin
%A Catherine Besson
%A Bernard Lyan
%A Estelle Pujos-Guillot
%A Augustin Scalbert
%T A Liquid Chromatography−Quadrupole Time-of-Flight (LC−QTOF)-based Metabolomic Approach Reveals New Metabolic Effects of Catechin in Rats Fed High-Fat Diets
%0 Journal Article
%D 2008
%J JOURNAL OF PROTEOME RESEARCH
%P 2388-2398
%V 7
%N 06
%U http://dx.doi.org/10.1021/pr800034h

%A Tong JC
%A Tammi MT
%T Methods and protocols for the assessment of protein allergenicity and cross-reactivity
%0 Journal Article
%D 2008
%J Front Biosci
%P 4882-8
%V 13
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%U http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508553&dopt=Abstract

%A Aiping Tong
%A Lihong Wu
%A Qingsong Lin
%A Quek Choon Lau
%A Xia Zhao
%A Jiong Li
%A Ping Chen
%A Lijuan Chen
%A Hong Tang
%A Canhua Huang
%A Yu-quan Wei
%T Proteomic analysis of cellular protein alterations using a hepatitis B virus-producing cellular model
%0 Journal Article
%D 2008
%J PROTEOMICS
%P 2012-2023
%V 8
%N 10
%U http://dx.doi.org/10.1002/pmic.200700849

%A Kathrin Grundmann
%A Jeannette Hübener
%A Karina Häbig
%A Bettina Reischmann
%A Sven Poths
%A Till-Karsten Hauser
%A Janine Magg
%A Olaf Riess
%A Michael Bonin
%A Huu Phuc Nguyen
%T Gene expression changes in a transgenic mouse model overexpressing human wildtype and mutant torsinA
%0 Journal Article
%D 2008
%J PROTEOMICS - CLINICAL APPLICATIONS
%P 720-736
%V 2
%N 5
%U http://dx.doi.org/10.1002/prca.200780053

%A Nakachi M
%A Matsumoto M
%A Terry PM
%A Cerny RL
%A Moriyama H
%T Identification of Guanylate Cyclases and Related Signaling Proteins in Sperm Tail from Sea Stars by Mass Spectrometry
%0 Journal Article
%D 2008
%J Mar Biotechnol (NY)
%P -
%V 
%N 
%U http://dx.doi.org/10.1007/s10126-008-9096-7
%8 May 7, 2008