TY - JOUR A1 - Golubnitschaja A1 - Olga T1 - Clinical Proteomics in Application to Predictive Diagnostics and Personalized Treatment of Diabetic Patients JO - Current Proteomics Y1 - 2008 SP - 35 EP - 44 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00004 ER - TY - JOUR A1 - Yassel Ramos A1 - Elain Gutierrez A1 - Yoan Machado A1 - Aniel Sánchez A1 - Lila Castellanos-Serra A1 - Luis J. González A1 - Jorge Fernández-de-Cossio A1 - Yasset Pérez-Riverol A1 - Lázaro Betancourt A1 - Jeovanis Gil A1 - Gabriel Padrón A1 - Vladimir T1 - Proteomics Based on Peptide Fractionation by SDS-Free PAGE JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2427 EP - 2434 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700840y ER - TY - JOUR A1 - Ryberg H A1 - Bowser R T1 - Protein biomarkers for amyotrophic lateral sclerosis JO - Expert Rev Proteomics Y1 - 2008 SP - 249 EP - 62 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.249 ER - TY - JOUR A1 - Mezhoud K A1 - Bauchet AL A1 - Château-Joubert S A1 - Praseuth D A1 - Marie A A1 - François JC A1 - Fontaine JJ A1 - Jaeg JP A1 - Cravedi JP A1 - Puiseux-Dao S A1 - Edery M T1 - Proteomic and phosphoproteomic analysis of cellular responses in medaka fish (Oryzias latipes) following oral gavage with microcystin-LR JO - Toxicon Y1 - 2008/03/25 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18471846&dopt=Abstract ER - TY - JOUR A1 - Hattori S A1 - Iida N A1 - Kosako H T1 - Identification of protein kinase substrates by proteomic approaches JO - Expert Rev Proteomics Y1 - 2008 SP - 497 EP - 505 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.497 ER - TY - JOUR A1 - Fumiko Matsuzaki A1 - Motoyuki Shimizu A1 - Hiroyuki Wariishi T1 - Proteomic and Metabolomic Analyses of the White-Rot Fungus Phanerochaete chrysosporium Exposed to Exogenous Benzoic Acid JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2342 EP - 2350 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700617s ER - TY - JOUR A1 - Svante Resjö A1 - Karin Berger A1 - Malin Fex A1 - Ola Hansson T1 - Proteomic studies in animal models of diabetes JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 654 EP - 669 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780030 ER - TY - JOUR A1 - Toews J A1 - Rogalski JC A1 - Clark TJ A1 - Kast J T1 - Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions JO - Anal Chim Acta Y1 - 2008 SP - 168 EP - 83 VL - 618 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18513538&dopt=Abstract ER - TY - JOUR A1 - Chun-Nam Lok A1 - Chi-Ming Ho A1 - Rong Chen A1 - Paul Kwong-Hang Tam A1 - Jen-Fu Chiu A1 - Chi-Ming Che T1 - Proteomic Identification of the Cus System as a Major Determinant of Constitutive Escherichia coli Silver Resistance of Chromosomal Origin JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2351 EP - 2356 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700646b ER - TY - JOUR A1 - Vouyovitch CM A1 - Vidal L A1 - Borges S A1 - Raccurt M A1 - Arnould C A1 - Chiesa J A1 - Lobie PE A1 - Lachuer J A1 - Mertani HC T1 - Proteomic analysis of autocrine/paracrine effects of human growth hormone in human mammary carcinoma cells JO - Adv Exp Med Biol Y1 - 2008 SP - 493 EP - 500 VL - 617 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18497074&dopt=Abstract ER - TY - JOUR A1 - Weerapana E A1 - Simon GM A1 - Cravatt BF T1 - Disparate proteome reactivity profiles of carbon electrophiles JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18488014&dopt=Abstract ER - TY - JOUR A1 - Scott B. Ficarro A1 - Jignesh R. Parikh A1 - Nathaniel C. Blank A1 - Jarrod A. Marto T1 - Niobium(V) Oxide (Nb2O5): Application to Phosphoproteomics JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4606 EP - 4613 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac800564h ER - TY - JOUR A1 - Kobeissy FH A1 - Sadasivan S A1 - Liu J A1 - Gold MS A1 - Wang KK T1 - Psychiatric research: psychoproteomics, degradomics and systems biology JO - Expert Rev Proteomics Y1 - 2008 SP - 293 EP - 314 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.293 ER - TY - JOUR A1 - Tribl F A1 - Meyer HE A1 - Marcus K T1 - Analysis of organelles within the nervous system: impact on brain and organelle functions JO - Expert Rev Proteomics Y1 - 2008 SP - 333 EP - 51 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.333 ER - TY - JOUR A1 - Seo GM A1 - Jung KH A1 - Kim SJ A1 - Kim JC A1 - Yoon JW A1 - Oh KK A1 - Lee JH A1 - Chai YG T1 - Bacillus anthracis Spores Influence ATP Synthase Activity in Murine Macrophages JO - J Microbiol Biotechnol Y1 - 2008 SP - 778 EP - 83 VL - 18 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18467876&dopt=Abstract ER - TY - JOUR A1 - Michelet L A1 - Zaffagnini M A1 - Vanacker H A1 - Le Maréchal P A1 - Marchand C A1 - Schroda M A1 - Lemaire SD A1 - Decottignies P T1 - In vivo targets of S-thiolation in Chlamydomonas reinhardtii JO - J Biol Chem Y1 - 2008/06/5 SP - EP - VL - IS - UR - http://dx.doi.org/10.1074/jbc.M802331200 ER - TY - JOUR A1 - Van Elzen R A1 - Moens L A1 - Dewilde S T1 - Expression profiling of the cerebral ischemic and hypoxic response JO - Expert Rev Proteomics Y1 - 2008 SP - 263 EP - 82 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.263 ER - TY - JOUR A1 - Frank Gillardon A1 - Matthias Mack A1 - Wolfgang Rist A1 - Cathrin Schnack A1 - Martin Lenter A1 - Tobias Hildebrandt A1 - Bastian Hengerer T1 - MicroRNA and proteome expression profiling in early-symptomatic ?-synuclein(A30P)-transgenic mice JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 697 EP - 705 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780025 ER - TY - JOUR A1 - Razumienko E A1 - Ornatsky O A1 - Kinach R A1 - Milyavsky M A1 - Lechman E A1 - Baranov V A1 - Winnik MA A1 - Tanner SD T1 - Element-tagged immunoassay with ICP-MS detection: Evaluation and comparison to conventional immunoassays JO - J Immunol Methods Y1 - 2008 SP - 56 EP - 63 VL - 336 IS - 1 UR - http://dx.doi.org/10.1016/j.jim.2008.03.011 ER - TY - JOUR A1 - Martinez-Pinna R A1 - Martin-Ventura JL A1 - Mas S A1 - Blanco-Colio LM A1 - Tuñon J A1 - Egido J T1 - Proteomics in atherosclerosis JO - Curr Atheroscler Rep Y1 - 2008 SP - 209 EP - 15 VL - 10 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18489848&dopt=Abstract ER - TY - JOUR A1 - Sun Q A1 - Miao M A1 - Jia X A1 - Guo W A1 - Wang L A1 - Yao Z A1 - Liu C A1 - Jiao B T1 - Subproteomic analysis of the mitochondrial proteins in rats 24 h after partial hepatectomy JO - J Cell Biochem Y1 - 2008/06/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/jcb.21811 ER - TY - JOUR A1 - Melanie Y. White A1 - Alistair V. G. Edwards A1 - Stuart J. Cordwell A1 - Jennifer E. Van Eyk T1 - Mitochondria: A mirror into cellular dysfunction in heart disease JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 845 EP - 861 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780135 ER - TY - JOUR A1 - Zhou M A1 - Veenstra T T1 - Mass spectrometry: m/z 1983-2008 JO - Biotechniques Y1 - 2008 SP - 667 EP - 8, 670 VL - 44 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474043&dopt=Abstract ER - TY - JOUR A1 - Ruth C. Lovering A1 - Emily Dimmer A1 - Varsha K. Khodiyar A1 - Daniel G. Barrell A1 - Peter Scambler A1 - Mike Hubank A1 - Rolf Apweiler A1 - Philippa J. Talmud T1 - Cardiovascular GO Annotation Initiative Year 1 Report: Why Cardiovascular GO? JO - PROTEOMICS Y1 - 2008 SP - 1950 EP - 1953 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200800078 ER - TY - JOUR A1 - Hegedus CM A1 - Skibola CF A1 - Warner M A1 - Skibola DR A1 - Alexander D A1 - Lim S A1 - Dangleben N A1 - Zhang L A1 - Clark M A1 - Pfeiffer RM A1 - Steinmaus C A1 - Smith AH A1 - Smith MT A1 - Moore LE T1 - Decreased Urinary Beta Defensin-1 Expression as a Biomarker of Response to Arsenic JO - Toxicol Sci Y1 - 2008/05/28 SP - EP - VL - IS - UR - http://dx.doi.org/10.1093/toxsci/kfn104 ER - TY - JOUR A1 - Ozgun Babur A1 - Recep Colak A1 - Emek Demir A1 - Ugur Dogrusoz T1 - PATIKAmad: Putting microarray data into pathway context JO - PROTEOMICS Y1 - 2008 SP - 2196 EP - 2198 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700769 ER - TY - JOUR A1 - Silvestri A1 - Elena; Lombardi A1 - Assunta; Lange A1 - Pieter d.; Lanni A1 - Antonia; Goglia A1 - Fernando; Moreno A1 - Maria T1 - Metabolic Action of Thyroid Hormones: Insights from Functional and Proteomic Studies JO - Current Proteomics Y1 - 2008 SP - 45 EP - 61 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00005 ER - TY - JOUR A1 - Lee A1 - Kyoungrim; Lee A1 - Joo-Woon T1 - Computational Approaches to Protein-Protein Docking JO - Current Proteomics Y1 - 2008 SP - 10 EP - 19 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00002 ER - TY - JOUR A1 - Olivier Heudi A1 - Samuel Barteau A1 - Dieter Zimmer A1 - Joerg Schmidt A1 - Kurt Bill A1 - Natalie Lehmann A1 - Christian Bauer A1 - Olivier Kretz T1 - Towards Absolute Quantification of Therapeutic Monoclonal Antibody in Serum by LC−MS/MS Using Isotope-Labeled Antibody Standard and Protein Cleavage Isotope Dilution Mass Spectrometry JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4200 EP - 4207 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac800205s ER - TY - JOUR A1 - Sneekes EJ A1 - Damen M A1 - Swart R A1 - Heck AJ T1 - Isoform separation of a multi-acetylated protein using capillary polystyrene-divinylbenzene monolithic columns JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18486138&dopt=Abstract ER - TY - JOUR A1 - Jennifer Sutton A1 - Tori Richmond A1 - Xu Shi A1 - Michael Athanas A1 - Celeste Ptak A1 - Robert Gerszten A1 - Leo Bonilla T1 - Performance characteristics of an FT MS-based workflow for label-free differential MS analysis of human plasma: standards, reproducibility, targeted feature investigation, and application to a model of controlled myocardial infarction JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 862 EP - 881 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780057 ER - TY - JOUR A1 - Chandler JM A1 - Treece ER A1 - Trenary HR A1 - Brenneman JL A1 - Flickner TJ A1 - Frommelt JL A1 - Oo ZM A1 - Patterson MM A1 - Rundle WT A1 - Valle OV A1 - Kim TD A1 - Walker GR A1 - Cooper CR Jr T1 - Protein profiling of the dimorphic, pathogenic fungus, Penicillium marneffei JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18533041&dopt=Abstract ER - TY - JOUR A1 - Sergeant N A1 - Bretteville A A1 - Hamdane M A1 - Caillet-Boudin ML A1 - Grognet P A1 - Bombois S A1 - Blum D A1 - Delacourte A A1 - Pasquier F A1 - Vanmechelen E A1 - Schraen-Maschke S A1 - Buee L T1 - Biochemistry of Tau in Alzheimer's disease and related neurological disorders JO - Expert Rev Proteomics Y1 - 2008 SP - 207 EP - 24 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.207 ER - TY - JOUR A1 - Wu DL A1 - Zhang WH A1 - Wang WJ A1 - Jing SB A1 - Xu YM T1 - Proteomic Evaluation of Urine from Renal Cell Carcinoma Using SELDI-TOF-MS and Tree Analysis Pattern JO - Technol Cancer Res Treat Y1 - 2008 SP - 155 EP - 60 VL - 7 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473487&dopt=Abstract ER - TY - JOUR A1 - John W. Holland A1 - Hilton C. Deeth A1 - Paul F. Alewood T1 - Analysis of disulphide linkages in bovine ?-casein oligomers using two-dimensional electrophoresis JO - ELECTROPHORESIS Y1 - 2008 SP - 2402 EP - 2410 VL - 29 IS - 11 UR - http://dx.doi.org/10.1002/elps.200700840 ER - TY - JOUR A1 - Andrés JA A1 - Maroja LS A1 - Harrison RG T1 - Searching for candidate speciation genes using a proteomic approach: seminal proteins in field crickets JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18495616&dopt=Abstract ER - TY - JOUR A1 - Prins A A1 - van Heerden PD A1 - Olmos E A1 - Kunert KJ A1 - Foyer CH T1 - Cysteine proteinases regulate chloroplast protein content and composition in tobacco leaves: a model for dynamic interactions with ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) vesicular bodies JO - J Exp Bot Y1 - 2008 SP - 1935 EP - 50 VL - 59 IS - 7 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18503045&dopt=Abstract ER - TY - JOUR A1 - Shenouda SK A1 - Lord KC A1 - McIlwain E A1 - Lucchesi PA A1 - Varner KJ T1 - Ecstasy produces left ventricular dysfunction and oxidative stress in rats JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18495670&dopt=Abstract ER - TY - JOUR A1 - List EO A1 - Berryman DE A1 - Bower B A1 - Sackmann-Sala L A1 - Gosney E A1 - Ding J A1 - Okada S A1 - Kopchick JJ T1 - The Use of Proteomics to Study Infectious Diseases JO - Infect Disord Drug Targets Y1 - 2008 SP - 31 EP - 45 VL - 8 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473905&dopt=Abstract ER - TY - JOUR A1 - Tannu NS A1 - Howell LL A1 - Hemby SE T1 - Integrative proteomic analysis of the nucleus accumbens in rhesus monkeys following cocaine self-administration JO - Mol Psychiatry Y1 - 2008/05/27 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/mp.2008.53 ER - TY - JOUR A1 - Esmé Waanders A1 - Anke L. L. Lameris A1 - Huub J. M. Op den Camp A1 - Wendy Pluk A1 - Jolein Gloerich A1 - Simon P. Strijk A1 - Joost P. H. Drenth T1 - Hepatocystin Is Not Secreted in Cyst Fluid of Hepatocystin Mutant Polycystic Liver Patients JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2490 EP - 2495 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr8000282 ER - TY - JOUR A1 - Sonia Molina A1 - Dorothée Missé A1 - Stéphane Roche A1 - Stéphanie Badiou A1 - Jean-Paul Cristol A1 - Claude Bonfils A1 - Jean-François Dierick A1 - Francisco Veas A1 - Thierry Levayer A1 - Dominique Bonnefont-Rousselot A1 - Patrick Maurel A1 - Joliette Coste A1 - Chantal Fournier-Wirth T1 - Identification of apolipoprotein C-III as a potential plasmatic biomarker associated with the resolution of hepatitis C virus infection JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 751 EP - 761 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200800020 ER - TY - JOUR A1 - Kashem MA A1 - Harper C A1 - Matsumoto I T1 - Differential protein expression in the corpus callosum (genu) of human alcoholics JO - Neurochem Int Y1 - 2008/04/20 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.neuint.2008.04.003 ER - TY - JOUR A1 - McHugh L A1 - Arthur JW T1 - Computational methods for protein identification from mass spectrometry data JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18463710&dopt=Abstract ER - TY - JOUR A1 - Liu Z A1 - Yang X A1 - Fu Y A1 - Zhang Y A1 - Yan J A1 - Song T A1 - Rocheford T A1 - Li J T1 - Proteomic analysis of early germs with high-oil and normal inbred lines in maize JO - Mol Biol Rep Y1 - 2008/06/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s11033-008-9250-3 ER - TY - JOUR A1 - Nan Wang and Liang Li T1 - Exploring the Precursor Ion Exclusion Feature of Liquid Chromatography−Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry for Improving Protein Identification in Shotgun Proteome Analysis JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4696 EP - 4710 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac800260w ER - TY - JOUR A1 - Laura Buggiotti A1 - Craig R. Primmer A1 - Petri Kouvonen A1 - Stanislav Bure? A1 - Garry L. Corthals A1 - Erica H. Leder T1 - Identification of differentially expressed proteins in Ficedula flycatchers JO - PROTEOMICS Y1 - 2008 SP - 2150 EP - 2153 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200701006 ER - TY - JOUR A1 - Makoto Watanabe A1 - Ichiro Takemasa A1 - Naomasa Kawaguchi A1 - Masakazu Miyake A1 - Noriko Nishimura A1 - Toshiya Matsubara A1 - Ei-ichi Matsuo A1 - Mitsugu Sekimoto A1 - Katsuya Nagai A1 - Nariaki Matsuura A1 - Morito Monden A1 - Osamu Nishimura T1 - An application of the 2-nitrobenzenesulfenyl method to proteomic profiling of human colorectal carcinoma: A novel approach for biomarker discovery JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 925 EP - 935 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780111 ER - TY - JOUR A1 - Obermeier B A1 - Mentele R A1 - Malotka J A1 - Kellermann J A1 - Kümpfel T A1 - Wekerle H A1 - Lottspeich F A1 - Hohlfeld R A1 - Dornmair K T1 - Matching of oligoclonal immunoglobulin transcriptomes and proteomes of cerebrospinal fluid in multiple sclerosis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18488038&dopt=Abstract ER - TY - JOUR A1 - Ristorcelli E A1 - Beraud E A1 - Verrando P A1 - Villard C A1 - Lafitte D A1 - Sbarra V A1 - Lombardo D A1 - Verine A T1 - Human tumor nanoparticles induce apoptosis of pancreatic cancer cells JO - FASEB J Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1096/fj.07-102855 ER - TY - JOUR A1 - Li KW A1 - Smit AB T1 - Subcellular proteomics in neuroscience JO - Front Biosci Y1 - 2008 SP - 4416 EP - 25 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508520&dopt=Abstract ER - TY - JOUR A1 - Umar A A1 - Jaremko M A1 - Burgers PC A1 - Luider TM A1 - Foekens JA A1 - Pasa-Tolic L T1 - High-throughput proteomics of breast carcinoma cells: a focus on FTICR-MS JO - Expert Rev Proteomics Y1 - 2008 SP - 445 EP - 55 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.445 ER - TY - JOUR A1 - Mojtahedi Z A1 - Clos J A1 - Kamali-Sarvestani E T1 - Leishmania major: Identification of developmentally regulated proteins in procyclic and metacyclic promastigotes JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18486941&dopt=Abstract ER - TY - JOUR A1 - Bibl M A1 - Wiltfang J T1 - Diagnostic and prognostic needs in neurodegenerative disorders: focus on proteomics JO - Expert Rev Proteomics Y1 - 2008 SP - 153 EP - 6 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.153 ER - TY - JOUR A1 - Liu Y A1 - Kim I A1 - Zhao H T1 - Protein interaction predictions from diverse sources JO - Drug Discov Today Y1 - 2008 SP - 409 EP - 16 VL - 13 IS - 9-10 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18468558&dopt=Abstract ER - TY - JOUR A1 - Visser NF A1 - Heck AJ T1 - Surface plasmon resonance mass spectrometry in proteomics JO - Expert Rev Proteomics Y1 - 2008 SP - 425 EP - 33 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.425 ER - TY - JOUR A1 - Li X A1 - Zhang Y A1 - Hu Y A1 - Chang M A1 - Liu T A1 - Wang D A1 - Zhang Y A1 - Zhang L A1 - Hu L T1 - Chaperone proteins identified from synthetic proteasome inhibitor-induced inclusions in PC12 cells by proteomic analysis JO - Acta Biochim Biophys Sin (Shanghai) Y1 - 2008 SP - 406 EP - 18 VL - 40 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18465026&dopt=Abstract ER - TY - JOUR A1 - Rukhsana Sultana A1 - D. Allan Butterfield T1 - Redox proteomics studies of in vivo amyloid beta-peptide animal models of Alzheimer's disease: Insight into the role of oxidative stress JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 685 EP - 696 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780024 ER - TY - JOUR A1 - Bryan M. Ham A1 - Feng Yang A1 - Hemalatha Jayachandran A1 - Navdeep Jaitly A1 - Matthew E. Monroe A1 - Marina A. Gritsenko A1 - Eric A. Livesay A1 - Rui Zhao A1 - Samuel O. Purvine A1 - Daniel Orton A1 - Joshua N. Adkins A1 - David G. Camp II A1 - Sandra Rossie A1 - Richard D. Smith T1 - The Influence of Sample Preparation and Replicate Analyses on HeLa Cell Phosphoproteome Coverage JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2215 EP - 2221 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700575m ER - TY - JOUR A1 - Yan Li A1 - Xiuqing Xu A1 - Dawei Qi A1 - Chunhui Deng A1 - Pengyuan Yang A1 - Xiangmin Zhang T1 - Novel Fe3O4@TiO2 Core−Shell Microspheres for Selective Enrichment of Phosphopeptides in Phosphoproteome Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2526 EP - 2538 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700582z ER - TY - JOUR A1 - Murphy L A1 - Clynes M A1 - Keenan J T1 - Proteomic investigation of taxol and taxotere resistance and invasiveness in a squamous lung carcinoma cell line JO - Biochim Biophys Acta Y1 - 2008/05/1 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.bbapap.2008.04.014 ER - TY - JOUR A1 - Pabst MJ A1 - Pabst KM A1 - Handsman DB A1 - Beranova-Giorgianni S A1 - Giorgianni F T1 - Proteome of monocyte priming by lipopolysaccharide, including changes in interleukin 1 beta and leukocyte elastase inhibitor JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18492268&dopt=Abstract ER - TY - JOUR A1 - Rossille D A1 - Burgun A A1 - Pangault-Lorho C A1 - Fest T T1 - Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research JO - Stud Health Technol Inform Y1 - 2008 SP - 455 EP - 60 VL - 136 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18487773&dopt=Abstract ER - TY - JOUR A1 - Brettschneider J A1 - Mogel H A1 - Lehmensiek V A1 - Ahlert T A1 - Süssmuth S A1 - Ludolph AC A1 - Tumani H T1 - Proteome Analysis of Cerebrospinal Fluid in Amyotrophic Lateral Sclerosis (ALS) JO - Neurochem Res Y1 - 2008/05/15 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s11064-008-9742-5 ER - TY - JOUR A1 - Grennan AK T1 - Plastoglobule proteome JO - Plant Physiol Y1 - 2008 SP - 443 EP - 5 VL - 147 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18524875&dopt=Abstract ER - TY - JOUR A1 - Yamanaka H A1 - Yakabe Y A1 - Saito K A1 - Sekijima M A1 - Sato H A1 - Shirai T T1 - High-accuracy Prediction of Carcinogenicity by Global Quantitative Analysis of Post-translational Modifications in a 28-Day In Vivo Rat Study JO - Cancer Genomics Proteomics Y1 - 2008 SP - 105 EP - 16 VL - 5 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18460739&dopt=Abstract ER - TY - JOUR A1 - Alos E A1 - Roca M A1 - Iglesias DJ A1 - Minguez-Mosquera MI A1 - Damasceno CM A1 - Thannhauser TW A1 - Rose JK A1 - Talon M A1 - Cercos M T1 - An evaluation of the basis and consequences of a stay-green mutation in the navel negra (nan) citrus mutant using transcriptomic and proteomic profiling and metabolite analysis JO - Plant Physiol Y1 - 2008/05/8 SP - EP - VL - IS - UR - http://dx.doi.org/10.1104/pp.108.119917 ER - TY - JOUR A1 - Tune Wulff A1 - Else K. Hoffmann A1 - Peter Roepstorff A1 - Flemming Jessen T1 - Comparison of two anoxia models in rainbow trout cells by a 2-DE and MS/MS-based proteome approach JO - PROTEOMICS Y1 - 2008 SP - 2035 EP - 2044 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700944 ER - TY - JOUR A1 - Karl-Friedrich Becker A1 - Christina Schott A1 - Ingrid Becker A1 - Heinz Höfler T1 - Guided protein extraction from formalin-fixed tissues for quantitative multiplex analysis avoids detrimental effects of histological stains JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 737 EP - 743 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780106 ER - TY - JOUR A1 - Rebecca L. Charles A1 - Philip Eaton T1 - Redox signalling in cardiovascular disease JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 823 EP - 836 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780104 ER - TY - JOUR A1 - Zhang S A1 - Xu N A1 - Nie J A1 - Dong L A1 - Li J A1 - Tong J T1 - Proteomic alteration in lung tissue of rats exposed to cigarette smoke JO - Toxicol Lett Y1 - 2008 SP - 191 EP - 6 VL - 178 IS - 3 UR - http://dx.doi.org/10.1016/j.toxlet.2008.03.014 ER - TY - JOUR A1 - Huang H A1 - Lin M A1 - Wang X A1 - Kikuchi T A1 - Mottaz H A1 - Norbeck A A1 - Rikihisa Y T1 - Proteomic Analysis of and Immune Responses to Ehrlichia chaffeensis Lipoproteins JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18490460&dopt=Abstract ER - TY - JOUR A1 - Miroslav Fojta A1 - Sabina Billová A1 - Luděk Havran A1 - Hana Pivoňková A1 - Hana Černocká A1 - Petra Horáková A1 - Emil Paleček T1 - Osmium Tetroxide, 2,2′-Bipyridine: Electroactive Marker for Probing Accessibility of Tryptophan Residues in Proteins JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4598 EP - 4605 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac800527u ER - TY - JOUR A1 - Xiang-min Lin A1 - Hui Li A1 - Chao Wang A1 - Xuan-xian Peng T1 - Proteomic Analysis of Nalidixic Acid Resistance in Escherichia coli: Identification and Functional Characterization of OM Proteins JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2399 EP - 2405 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800073c ER - TY - JOUR A1 - Sang Woo Kim A1 - Hye Jin Hwang A1 - Yu Mi Baek A1 - Sung Hak Lee A1 - Hee Sun Hwang A1 - Jong Won Yun T1 - Proteomic and transcriptomic analysis for streptozotocin-induced diabetic rat pancreas in response to fungal polysaccharide treatments JO - PROTEOMICS Y1 - 2008 SP - 2344 EP - 2361 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700779 ER - TY - JOUR A1 - Kim DK A1 - Kerman K A1 - Hiep HM A1 - Saito M A1 - Yamamura S A1 - Takamura Y A1 - Kwon YS A1 - Tamiya E T1 - Label-free optical detection of aptamer-protein interactions using gold-capped oxide nanostructures JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18485275&dopt=Abstract ER - TY - JOUR A1 - Taufika Islam Williams A1 - Diana A. Saggese A1 - David C. Muddiman T1 - Studying O-Linked Protein Glycosylations in Human Plasma JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2562 EP - 2568 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800066e ER - TY - JOUR A1 - Butterfield DA A1 - Sultana R T1 - Redox proteomics: understanding oxidative stress in the progression of age-related neurodegenerative disorders JO - Expert Rev Proteomics Y1 - 2008 SP - 157 EP - 60 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.157 ER - TY - JOUR A1 - Giovanni Ciriello and Concettina Guerra T1 - A review on models and algorithms for motif discovery in protein-protein interaction networks JO - Brief Funct Genomic Proteomic Y1 - 2008 SP - 147 EP - 156; doi:10.1093/bfgp/eln015 VL - 7 IS - 2 UR - http://bfgp.oxfordjournals.org/cgi/content/abstract/7/2/147?etoc ER - TY - JOUR A1 - Rebecca D. Taylor A1 - Audrey Saparno A1 - Barbara Blackwell A1 - Valar Anoop A1 - Steve Gleddie A1 - Nicholas A. Tinker A1 - Linda J. Harris T1 - Proteomic analyses of Fusarium graminearum grown under mycotoxin-inducing conditions JO - PROTEOMICS Y1 - 2008 SP - 2256 EP - 2265 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700610 ER - TY - JOUR A1 - Sara P. Gaucher A1 - Alyssa M. Redding A1 - Aindrila Mukhopadhyay A1 - Jay D. Keasling A1 - Anup K. Singh T1 - Post-Translational Modifications of Desulfovibrio vulgaris Hildenborough Sulfate Reduction Pathway Proteins JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2320 EP - 2331 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700772s ER - TY - JOUR A1 - Pechanova O A1 - Stone WD A1 - Monroe W A1 - Nebeker TE A1 - Klepzig KD A1 - Yuceer C T1 - Global and comparative protein profiles of the pronotum of the southern pine beetle, Dendroctonus frontalis JO - Insect Mol Biol Y1 - 2008 SP - 261 EP - 77 VL - 17 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18477241&dopt=Abstract ER - TY - JOUR A1 - Joram J. Buza and Shane C. Burgess T1 - Different Signaling Pathways Expressed by Chicken Naïve CD4+ T Cells, CD4+ Lymphocytes Activated with Staphylococcal Enterotoxin B, and Those Malignantly Transformed by Marek’s Disease Virus JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2380 EP - 2387 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700844z ER - TY - JOUR A1 - Hendrik Neubert A1 - Timothy P. Bonnert A1 - Klaus Rumpel A1 - Brandon T. Hunt A1 - Ernst S. Henle A1 - Ian T. James T1 - Label-Free Detection of Differential Protein Expression by LC/MALDI Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2270 EP - 2279 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700705u ER - TY - JOUR A1 - Tasneem H. Patwa A1 - Yanfei Wang A1 - Diane M. Simeone A1 - David M. Lubman T1 - Enhanced Detection of Autoantibodies on Protein Microarrays Using a Modified Protein Digestion Technique JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2553 EP - 2561 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800023g ER - TY - JOUR A1 - Mark A. Baker A1 - Louise Hetherington A1 - Gabi Reeves A1 - Jörg Müller A1 - R. John Aitken T1 - The rat sperm proteome characterized via IPG strip prefractionation and LC-MS/MS identification JO - PROTEOMICS Y1 - 2008 SP - 2312 EP - 2321 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700876 ER - TY - JOUR A1 - Dziadziuszko R A1 - Hirsch FR T1 - Advances in genomic and proteomic studies of non-small-cell lung cancer: clinical and translational research perspective JO - Clin Lung Cancer Y1 - 2008 SP - 78 EP - 84 VL - 9 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18501093&dopt=Abstract ER - TY - JOUR A1 - Choi YE A1 - Shim WB T1 - Identification of Genes Associated with Fumonisin Biosynthesis in Fusarium verticillioides via Proteomics and Quantitative Real-Time PCR JO - J Microbiol Biotechnol Y1 - 2008 SP - 648 EP - 57 VL - 18 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18467856&dopt=Abstract ER - TY - JOUR A1 - Lv S A1 - Wang JH A1 - Liu F A1 - Gao Y A1 - Fei R A1 - Du SC A1 - Wei L T1 - Senescence marker protein 30 in acute liver failure: validation of a mass spectrometry proteomics assay JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18507831&dopt=Abstract ER - TY - JOUR A1 - He H A1 - Li J T1 - Proteomic analysis of phosphoproteins regulated by abscisic acid in rice leaves JO - Biochem Biophys Res Commun Y1 - 2008 SP - 883 EP - 8 VL - 371 IS - 4 UR - http://dx.doi.org/10.1016/j.bbrc.2008.05.001 ER - TY - JOUR A1 - Paoletti AC A1 - Washburn MP T1 - Quantitation in proteomic experiments utilizing mass spectrometry JO - Biotechnol Genet Eng Rev Y1 - 2006 SP - 1 EP - 19 VL - 22 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18476323&dopt=Abstract ER - TY - JOUR A1 - Cathrin Schnack A1 - Bastian Hengerer A1 - Frank Gillardon T1 - Identification of novel substrates for Cdk5 and new targets for Cdk5 inhibitors using high-density protein microarrays JO - PROTEOMICS Y1 - 2008 SP - 1980 EP - 1986 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200701063 ER - TY - JOUR A1 - Shiota M A1 - Kusakabe H A1 - Hikita Y A1 - Nakao T A1 - Izumi Y A1 - Iwao H T1 - Pharmacogenomics of cardiovascular pharmacology: molecular network analysis in pleiotropic effects of statin - an experimental elucidation of the pharmacologic action from protein-protein interaction analysis JO - J Pharmacol Sci Y1 - 2008 SP - 15 EP - 9 VL - 107 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18490854&dopt=Abstract ER - TY - JOUR A1 - Smalla KH A1 - Mikhaylova M A1 - Sahin J A1 - Bernstein HG A1 - Bogerts B A1 - Schmitt A A1 - van der Schors R A1 - Smit AB A1 - Li KW A1 - Gundelfinger ED A1 - Kreutz MR T1 - A comparison of the synaptic proteome in human chronic schizophrenia and rat ketamine psychosis suggest that prohibitin is involved in the synaptic pathology of schizophrenia JO - Mol Psychiatry Y1 - 2008/05/27 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/mp.2008.60 ER - TY - JOUR A1 - Yang S A1 - Liu T A1 - Li S A1 - Zhang X A1 - Ding Q A1 - Que H A1 - Yan X A1 - Wei K A1 - Liu S T1 - Comparative proteomic analysis of brains of naturally aging mice JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18495355&dopt=Abstract ER - TY - JOUR A1 - Chi-An Hsu A1 - Wei-Ru Lin A1 - Jung-Chen Li A1 - Yi-Lung Liu A1 - Yen-Tzu Tseng A1 - Chun-Mien Chang A1 - Yeong-Sheng Lee A1 - Chiou-Ying Yang T1 - Immunoproteomic identification of the hypothetical protein NMB1468 as a novel lipoprotein ubiquitous in Neisseria meningitidis with vaccine potential JO - PROTEOMICS Y1 - 2008 SP - 2115 EP - 2125 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700574 ER - TY - JOUR A1 - Graham M. West A1 - Liangjie Tang A1 - Michael C. Fitzgerald T1 - Thermodynamic Analysis of Protein Stability and Ligand Binding Using a Chemical Modification- and Mass Spectrometry-Based Strategy JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4175 EP - 4185 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac702610a ER - TY - JOUR A1 - Walker JW T1 - Protein scaffolds, lipid domains and substrate recognition in protein kinase C function: implications for rational drug design JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18491053&dopt=Abstract ER - TY - JOUR A1 - Xiuxia Du A1 - Feng Yang A1 - Nathan P. Manes A1 - David L. Stenoien A1 - Matthew E. Monroe A1 - Joshua N. Adkins A1 - David J. States A1 - Samuel O. Purvine A1 - David G. Camp A1 - II A1 - Richard D. Smith T1 - Linear Discriminant Analysis-Based Estimation of the False Discovery Rate for Phosphopeptide Identifications JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2195 EP - 2203 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr070510t ER - TY - JOUR A1 - Calvo A1 - Enrique; Camafeita A1 - Emilio; Diaz A1 - J. F.; Lopez A1 - Juan A.n.t.o.n.i.o T1 - Mass Spectrometry for Studying the Interaction between Small Molecules and Proteins JO - Current Proteomics Y1 - 2008 SP - 20 EP - 34 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00003 ER - TY - JOUR A1 - Meuwis MA A1 - Fillet M A1 - Lutteri L A1 - Marée R A1 - Geurts P A1 - de Seny D A1 - Malaise M A1 - Chapelle JP A1 - Wehenkel L A1 - Belaiche J A1 - Merville MP A1 - Louis E T1 - Proteomics for prediction and characterization of response to infliximab in Crohn's disease: A pilot study JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18489908&dopt=Abstract ER - TY - JOUR A1 - Cobb SR A1 - Pitt A T1 - Proteomics in the study of hippocampal plasticity JO - Expert Rev Proteomics Y1 - 2008 SP - 393 EP - 404 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.393 ER - TY - JOUR A1 - Srivastava S A1 - Swanson SK A1 - Manel N A1 - Florens L A1 - Washburn MP A1 - Skowronski J T1 - Lentiviral Vpx accessory factor targets VprBP/DCAF1 substrate adaptor for cullin 4 E3 ubiquitin ligase to enable macrophage infection JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18464893&dopt=Abstract ER - TY - JOUR A1 - Chia-Kai Chang A1 - Chih-Che Wu A1 - Yi-Sheng Wang A1 - Huan-Cheng Chang T1 - Selective Extraction and Enrichment of Multiphosphorylated Peptides Using Polyarginine-Coated Diamond Nanoparticles JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3791 EP - 3797 VL - 80 IS - 10 UR - http://dx.doi.org/10.1021/ac702618h ER - TY - JOUR A1 - Andrea Biondani A1 - Franco Turrini A1 - Franco Carta A1 - Alessandro Matté A1 - Alida Filippini A1 - Angela Siciliano A1 - Yves Beuzard A1 - Lucia De Franceschi T1 - Heat-shock protein-27, -70 and peroxiredoxin-II show molecular chaperone function in sickle red cells: Evidence from transgenic sickle cell mouse model JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 706 EP - 719 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780058 ER - TY - JOUR A1 - Desire TK A1 - Victor M A1 - Robert K A1 - Michael L A1 - Mohammad S A1 - Peter S T1 - Probing mechanisms of axonopathy. 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Langham A1 - Pierre Ronco A1 - Mark A. Knepper A1 - Visith Thongboonkerd T1 - Towards Standard Protocols and Guidelines for Urine Proteomics: A Report on the Human Kidney and Urine Proteome Project (HKUPP) Symposium and Workshop 6 October 2007, Seoul, Korea and 1 November 2007, San Francisco, CA, USA JO - PROTEOMICS Y1 - 2008 SP - 2156 EP - 2159 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200800138 ER - TY - JOUR A1 - Hélida M. Andrade A1 - Silvane M. F. Murta A1 - Alex Chapeaurouge A1 - Jonas Perales A1 - Phillipe Nirdé A1 - Alvaro J. Romanha T1 - Proteomic Analysis of Trypanosoma cruzi Resistance to Benznidazole JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2357 EP - 2367 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700659m ER - TY - JOUR A1 - Streit F A1 - Delettre J A1 - Corrieu G A1 - Béal C T1 - Acid adaptation of Lactobacillus delbrueckii subsp. bulgaricus induces physiological responses at membrane and cytosolic levels that improves cryotolerance JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18498349&dopt=Abstract ER - TY - JOUR A1 - Jie Li A1 - Xu-Dong Wu A1 - Shan-Ting Hao A1 - Xiu-Jie Wang A1 - Hong-Qing Ling T1 - Proteomic response to iron deficiency in tomato root JO - PROTEOMICS Y1 - 2008 SP - 2299 EP - 2311 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700942 ER - TY - JOUR A1 - Tabatabai LB T1 - Identification of Pasteurella multocida CHAPS-soluble outer membrane proteins JO - Avian Dis Y1 - 2008 SP - 147 EP - 9 VL - 52 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18459313&dopt=Abstract ER - TY - JOUR A1 - Adam RM A1 - Yang W A1 - Di Vizio D A1 - Mukhopadhyay NK A1 - Steen H T1 - Rapid preparation of nuclei-depleted detergent-resistant membrane fractions suitable for proteomics analysis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18534013&dopt=Abstract ER - TY - JOUR A1 - Hooven LA A1 - Baird WM T1 - Proteomic analysis of MCF-7 cells treated with benzo[a]pyrene, dibenzo[a,l]pyrene, coal tar extract, and diesel exhaust extract JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18495319&dopt=Abstract ER - TY - JOUR A1 - Quintana FJ A1 - Farez MF A1 - Weiner HL T1 - Systems biology approaches for the study of multiple sclerosis JO - J Cell Mol Med Y1 - 2008/05/26 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1582-4934.2008.00375.x ER - TY - JOUR A1 - Ahmed FE T1 - Mining the oncoproteome and studying molecular interactions for biomarker development by 2DE, ChIP and SPR technologies JO - Expert Rev Proteomics Y1 - 2008 SP - 469 EP - 96 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.469 ER - TY - JOUR A1 - Clermont F A1 - Gonzalez NS A1 - Communi D A1 - Franken S A1 - Dumont JE A1 - Robaye B T1 - HDGF is dephosphorylated during the early steps of endothelial cell apoptosis in a caspase-dependent way JO - J Cell Biochem Y1 - 2008/05/8 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/jcb.21788 ER - TY - JOUR A1 - Singh G A1 - Chavan HD A1 - Dey CS T1 - Proteomic analysis of miltefosine-resistant Leishmania reveals the possible involvement of eukaryotic initiation factor 4A (eIF4A) JO - Int J Antimicrob Agents Y1 - 2008 SP - 584 EP - 6 VL - 31 IS - 6 UR - http://dx.doi.org/10.1016/j.ijantimicag.2008.01.032 ER - TY - JOUR A1 - Zhang Y A1 - Wang YH A1 - Zhang XH A1 - Ge HY A1 - Arendt-Nielsen L A1 - Shao JM A1 - Yue SW T1 - Proteomic analysis of differential proteins related to the neuropathic pain and neuroprotection in the dorsal root ganglion following its chronic compression in rats JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18493752&dopt=Abstract ER - TY - JOUR A1 - Rustichelli C A1 - Visioli G A1 - Kostecka D A1 - Vurro E A1 - Sanità di Toppi L A1 - Marmiroli N T1 - Proteomic analysis in the lichen Physcia adscendens exposed to cadmium stress JO - Environ Pollut Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.envpol.2008.04.010 ER - TY - JOUR A1 - Zabel C A1 - Andreew A A1 - Mao L A1 - Hartl D T1 - Protein expression overlap: more important than which proteins change in expression? 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Feener T1 - Characterization of the Vitreous Proteome in Diabetes without Diabetic Retinopathy and Diabetes with Proliferative Diabetic Retinopathy JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2516 EP - 2525 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800112g ER - TY - JOUR A1 - Boschetti E A1 - Giorgio Righetti P T1 - Hexapeptide combinatorial ligand libraries: the march for the detection of the low-abundance proteome continues JO - Biotechniques Y1 - 2008 SP - 663 EP - 5 VL - 44 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474042&dopt=Abstract ER - TY - JOUR A1 - Salvadó Z A1 - Chiva R A1 - Rodríguez-Vargas S A1 - Rández-Gil F A1 - Mas A A1 - Guillamón JM T1 - Proteomic evolution of a wine yeast during the first hours of fermentation JO - FEMS Yeast Res Y1 - 2008/05/22 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1567-1364.2008.00389.x ER - TY - JOUR A1 - Hess S A1 - Chen X T1 - Applications of proteomics to the study of adipose tissue JO - Methods Mol Biol Y1 - 2008 SP - 131 EP - 40 VL - 456 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18516558&dopt=Abstract ER - TY - JOUR A1 - Jean-Daniel Tissot A1 - Niels Lion T1 - Clinical Proteomics: From Diagnosis to Therapy. 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JO - Y1 - SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/prca.200890016 ER - TY - JOUR A1 - Xun M A1 - Zhao SH A1 - Cao CX A1 - Song J A1 - Shao MM A1 - Chu YL T1 - Proteomic analysis of HuH-7 cells harboring in vitro-transcribed full-length hepatitis C virus 1b RNA JO - Acta Pharmacol Sin Y1 - 2008 SP - 720 EP - 7 VL - 29 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18501119&dopt=Abstract ER - TY - JOUR A1 - Shaw ML A1 - Stone KL A1 - Colangelo CM A1 - Gulcicek EE A1 - Palese P T1 - Cellular proteins in influenza virus particles JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18535660&dopt=Abstract ER - TY - JOUR A1 - Seo HS A1 - Hirano M A1 - Shibato J A1 - Rakwal R A1 - Hwang IK A1 - Masuo Y T1 - Effects of Coffee Bean Aroma on the Rat Brain Stressed by Sleep Deprivation: A Selected Transcript- and 2D Gel-Based Proteome Analysis JO - J Agric Food Chem Y1 - 2008/06/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1021/jf8001137 ER - TY - JOUR A1 - Misato Hirano A1 - Randeep Rakwal A1 - Junko Shibato A1 - Hirofumi Sawa A1 - Kazuo Nagashima A1 - Yoko Ogawa A1 - Yasukazu Yoshida A1 - Hitoshi Iwahashi A1 - Etsuo Niki A1 - Yoshinori Masuo T1 - Proteomics- and Transcriptomics-Based Screening of Differentially Expressed Proteins and Genes in Brain of Wig Rat: A Model for Attention Deficit Hyperactivity Disorder (ADHD) Research JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2471 EP - 2489 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800025t ER - TY - JOUR A1 - Shaohui Sui A1 - Jinglan Wang A1 - Bing Yang A1 - Lina Song A1 - Jiyang Zhang A1 - Ming Chen A1 - Jinfeng Liu A1 - Zhuang Lu A1 - Yun Cai A1 - Shuo Chen A1 - Wei Bi A1 - Yunping Zhu A1 - Fuchu He A1 - Xiaohong Qian T1 - Phosphoproteome analysis of the human Chang liver cells using SCX and a complementary mass spectrometric strategy JO - PROTEOMICS Y1 - 2008 SP - 2024 EP - 2034 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700896 ER - TY - JOUR A1 - Shannon L. 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Van Eyk T1 - Cardiovascular Proteomics JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 785 EP - 786 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200890020 ER - TY - JOUR A1 - Sadiq ST A1 - Agranoff D T1 - Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18513446&dopt=Abstract ER - TY - JOUR A1 - Sidhu VK A1 - Vorhoelter FJ A1 - Niehaus K A1 - Watt SA T1 - Analysis of outer membrane vesicle associated proteins isolated from the plant pathogenic bacterium Xanthomonas campestris pv. campestris JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18518965&dopt=Abstract ER - TY - JOUR A1 - Giordano Pula A1 - Sue Perera A1 - Marianna Prokopi A1 - Anissa Sidibe A1 - Chantal M. Boulanger A1 - Manuel Mayr T1 - Proteomic analysis of secretory proteins and vesicles in vascular research JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 882 EP - 891 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200800040 ER - TY - JOUR A1 - Korolainen MA A1 - Corthals GL A1 - Kouvonen P A1 - Kurkinen KM A1 - Nyman TA T1 - 3rd Annual FinnProt Meeting: from cells to systems JO - Expert Rev Proteomics Y1 - 2008 SP - 389 EP - 91 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.389 ER - TY - JOUR A1 - Van Duyne R A1 - Kehn-Hall K A1 - Klase Z A1 - Easley R A1 - Heydarian M A1 - Saifuddin M A1 - Wu W A1 - Kashanchi F T1 - Retroviral proteomics and interactomes: intricate balances of cell survival and viral replication JO - Expert Rev Proteomics Y1 - 2008 SP - 507 EP - 28 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.507 ER - TY - JOUR A1 - Tanner M. Schaub A1 - Christopher L. Hendrickson A1 - Stevan Horning A1 - John P. Quinn A1 - Michael W. 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Marshall T1 - High-Performance Mass Spectrometry: Fourier Transform Ion Cyclotron Resonance at 14.5 Tesla JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3985 EP - 3990 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac800386h ER - TY - JOUR A1 - Clokie MR A1 - Thalassinos K A1 - Boulanger P A1 - Slade SE A1 - Stoilova-McPhie S A1 - Cane M A1 - Scrivens JH A1 - Mann NH T1 - A proteomic approach to the identification of the major virion structural proteins of the marine cyanomyovirus S-PM2 JO - Microbiology Y1 - 2008 SP - 1775 EP - 82 VL - 154 IS - Pt 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18524932&dopt=Abstract ER - TY - JOUR A1 - Rezaul K A1 - Wilson LL A1 - Han DK T1 - Direct tissue proteomics in human diseases: potential applications to melanoma research JO - Expert Rev Proteomics Y1 - 2008 SP - 405 EP - 12 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.405 ER - TY - JOUR A1 - Sowell SM A1 - Norbeck AD A1 - Lipton MS A1 - Nicora CD A1 - 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2255 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200701067 ER - TY - JOUR A1 - Issaq H A1 - Veenstra T T1 - Two-dimensional polyacrylamide gel electrophoresis (2D-PAGE): advances and perspectives JO - Biotechniques Y1 - 2008 SP - 697 EP - 8, 700 VL - 44 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474047&dopt=Abstract ER - TY - JOUR A1 - Dekker C A1 - Stirling PC A1 - McCormack EA A1 - Filmore H A1 - Paul A A1 - Brost RL A1 - Costanzo M A1 - Boone C A1 - Leroux MR A1 - Willison KR T1 - The interaction network of the chaperonin CCT JO - EMBO J Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/emboj.2008.108 ER - TY - JOUR A1 - Angela Bachi A1 - Carolina Simó A1 - Umberto Restuccia A1 - Luc Guerrier A1 - Frederic Fortis A1 - Egisto Boschetti A1 - Marco Masseroli A1 - Pier Giorgio Righetti T1 - Performance of Combinatorial Peptide Libraries in Capturing the Low-Abundance Proteome of Red Blood Cells. 2. Behavior of Resins Containing Individual Amino Acids JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3557 EP - 3565 VL - 80 IS - 10 UR - http://dx.doi.org/10.1021/ac8001353 ER - TY - JOUR A1 - Baukje de Roos A1 - Susan J. Duthie A1 - Abigael C. J. Polley A1 - Francis Mulholland A1 - Freek G. Bouwman A1 - Carolin Heim A1 - Garry J. Rucklidge A1 - Ian T. Johnson A1 - Edwin C. Mariman A1 - Hannelore Daniel A1 - Ruan M. Elliott T1 - Proteomic Methodological Recommendations for Studies Involving Human Plasma, Platelets, and Peripheral Blood Mononuclear Cells JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2280 EP - 2290 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700714x ER - TY - JOUR A1 - Rachel M. Gonzalez A1 - Shannon L. Seurynck-Servoss A1 - Sheila A. Crowley A1 - Marty Brown A1 - Gilbert S. Omenn A1 - Daniel F. Hayes A1 - Richard C. Zangar T1 - Development and Validation of Sandwich ELISA Microarrays with Minimal Assay Interference JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2406 EP - 2414 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700822t ER - TY - JOUR A1 - Yu CL A1 - Yan SP A1 - Wang CC A1 - Hu HT A1 - Sun WN A1 - Yan CQ A1 - Chen JP A1 - Yang L T1 - Pathogenesis-related proteins in somatic hybrid rice induced by bacterial blight JO - Phytochemistry Y1 - 2008/06/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.phytochem.2008.04.006 ER - TY - JOUR A1 - Alexei L. Krasnoselsky A1 - Vitor M. Faca A1 - Sharon J. Pitteri A1 - Qing Zhang A1 - Samir M. Hanash T1 - Isoform Analysis of LC−MS/MS Data from Multidimensional Fractionation of the Serum Proteome JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2546 EP - 2552 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr7007219 ER - TY - JOUR A1 - Pflieger D A1 - Rossier J T1 - Organelle proteomics. Preface JO - Methods Mol Biol Y1 - 2008 SP - v EP - viii VL - 432 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18488275&dopt=Abstract ER - TY - JOUR A1 - Zhao Y A1 - Denner L A1 - Haidacher SJ A1 - Lejeune WS A1 - Tilton RG T1 - Comprehensive analysis of the mouse renal cortex using two-dimensional HPLC - tandem mass spectrometry JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18501002&dopt=Abstract ER - TY - JOUR A1 - Rebekah L. Gundry A1 - Kenneth R. Boheler A1 - Jennifer E. Van Eyk A1 - Bernd Wollscheid T1 - A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 892 EP - 903 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780122 ER - TY - JOUR A1 - Taipa MA T1 - Immunoassays: biological tools for high throughput screening and characterisation of combinatorial libraries JO - Comb Chem High Throughput Screen Y1 - 2008 SP - 325 EP - 35 VL - 11 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18473742&dopt=Abstract ER - TY - JOUR A1 - Rahul Singh T1 - A review of algorithmic techniques for disulfide-bond determination JO - Brief Funct Genomic Proteomic Y1 - 2008 SP - 157 EP - 172; doi:10.1093/bfgp/eln008 VL - 7 IS - 2 UR - http://bfgp.oxfordjournals.org/cgi/content/abstract/7/2/157?etoc ER - TY - JOUR A1 - Sergio de la Fuente van Bentem A1 - Dorothea Anrather A1 - Ilse Dohnal A1 - Elisabeth Roitinger A1 - Edina Csaszar A1 - Jos Joore A1 - Joshua Buijnink A1 - Alessandro Carreri A1 - Celine Forzani A1 - Zdravko J. Lorkovic A1 - Andrea Barta A1 - David Lecourieux A1 - Andreas Verhounig A1 - Claudia Jonak A1 - T1 - Site-Specific Phosphorylation Profiling of Arabidopsis Proteins by Mass Spectrometry and Peptide Chip Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2458 EP - 2470 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr8000173 ER - TY - JOUR A1 - Sarkar P A1 - Sarkar S A1 - Ramesh V A1 - Kim H A1 - Barnes S A1 - Kulkarni A A1 - Hall JC A1 - Wilson BL A1 - Thomas RL A1 - Pellis NR A1 - Ramesh GT T1 - Proteomic Analysis of Mouse Hypothalamus under Simulated Microgravity JO - Neurochem Res Y1 - 2008/05/13 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s11064-008-9738-1 ER - TY - JOUR A1 - Li KW A1 - Jimenez CR T1 - Synapse proteomics: current status and quantitative applications JO - Expert Rev Proteomics Y1 - 2008 SP - 353 EP - 60 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.353 ER - TY - JOUR A1 - Yurist-Doutsch S A1 - Chaban B A1 - VanDyke DJ A1 - Jarrell KF A1 - Eichler J T1 - Sweet to the extreme: protein glycosylation in Archaea JO - Mol Microbiol Y1 - 2008 SP - 1079 EP - 84 VL - 68 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18476920&dopt=Abstract ER - TY - JOUR A1 - Buhimschi CS A1 - Abdel-Razeq S A1 - Cackovic M A1 - Pettker CM A1 - Dulay AT A1 - Bahtiyar MO A1 - Zambrano E A1 - Martin R A1 - Norwitz ER A1 - Bhandari V A1 - Buhimschi IA T1 - Fetal Heart Rate Monitoring Patterns in Women with Amniotic Fluid Proteomic Profiles Indicative of Inflammation JO - Am J Perinatol Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1055/s-2008-1078761 ER - TY - JOUR A1 - Suter B A1 - Kittanakom S A1 - Stagljar I T1 - Interactive proteomics: what lies ahead? JO - Biotechniques Y1 - 2008 SP - 681 EP - 91 VL - 44 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474045&dopt=Abstract ER - TY - JOUR A1 - Canter MP A1 - Graham CA A1 - Heit MH A1 - Blackwell LS A1 - Wilkey DW A1 - Klein JB A1 - Merchant ML T1 - Proteomic techniques identify urine proteins that differentiate patients with interstitial cystitis from asymptomatic control subjects JO - Am J Obstet Gynecol Y1 - 2008 SP - 553.e1 EP - 6 VL - 198 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18455532&dopt=Abstract ER - TY - JOUR A1 - Solomon KR A1 - Steen H T1 - Proteomics 2008, a day of information and inspiration at Children's Hospital Boston JO - J Mass Spectrom Y1 - 2008 SP - 825 EP - 826 VL - 43 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18504781&dopt=Abstract ER - TY - JOUR A1 - Cunzhong Yuan A1 - Liyan Jiao A1 - Leilei Yang A1 - Wantao Ying A1 - Zhishang Hu A1 - Jinfeng Liu A1 - Fang Cui A1 - Lei Li A1 - Linyi Qian A1 - Yan Teng A1 - Haiying Hang A1 - Xiaohong Qian A1 - Xiao Yang T1 - The up-regulation of 14-3-3 proteins in Smad4 deficient epidermis and hair follicles at catagen JO - PROTEOMICS Y1 - 2008 SP - 2230 EP - 2243 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700760 ER - TY - JOUR A1 - Beveridge JD A1 - Mitchell GB A1 - Brewer D A1 - Clark ME A1 - Caswell JL T1 - Altered protein expression in neutrophils of calves treated with dexamethasone JO - Can J Vet Res Y1 - 2008 SP - 249 EP - 52 VL - 72 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18505188&dopt=Abstract ER - TY - JOUR A1 - Axel Gödecke A1 - Jürgen Schrader A1 - Michael Reinartz T1 - Nitric oxide-mediated protein modification in cardiovascular physiology and pathology JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 811 EP - 822 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780079 ER - TY - JOUR A1 - Li K A1 - Xu C A1 - Li Z A1 - Zhang K A1 - Yang A A1 - Zhang J T1 - Comparative proteome analyses of phosphorus responses in maize (Zea mays L.) roots of wild-type and low-P tolerant mutant reveal root characteristics associated with P-efficiency JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18489707&dopt=Abstract ER - TY - JOUR A1 - Maimaitiyiming M A1 - Kumanogoh H A1 - Nakamura S A1 - Nagata KI A1 - Suzaki T A1 - Maekawa S T1 - Biochemical characterization of membrane-associated septin from rat brain JO - J Neurochem Y1 - 2008/05/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1471-4159.2008.05450.x ER - TY - JOUR A1 - Allen E. Haddrell A1 - Stephen van Eeden A1 - George R. Agnes T1 - MALDI-MS Monitoring of Differential Biomolecule Secretion from Human Lung Cells in Vitro Following Incubation with <150 Particles JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2539 EP - 2545 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700602q ER - TY - JOUR A1 - Fournier I A1 - Wisztorski M A1 - Salzet M T1 - Tissue imaging using MALDI-MS: a new frontier of histopathology proteomics JO - Expert Rev Proteomics Y1 - 2008 SP - 413 EP - 24 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.413 ER - TY - JOUR A1 - Roland A. Pache A1 - Patrick Aloy T1 - Incorporating high-throughput proteomics experiments into structural biology pipelines: Identification of the low-hanging fruits JO - PROTEOMICS Y1 - 2008 SP - 1959 EP - 1964 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700966 ER - TY - JOUR A1 - Nicolas Bousette A1 - Anthony O. Gramolini A1 - Thomas Kislinger T1 - Proteomics-based investigations of animal models of disease JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 638 EP - 653 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780043 ER - TY - JOUR A1 - Jung J A1 - Ahn YJ A1 - Kang LW T1 - A Novel Approach to Investigating Protein/Protein Interactions and Their Functions by TAP-tagged Yeast Strains and its Application to Examine Yeast Transcription Machinery JO - J Microbiol Biotechnol Y1 - 2008 SP - 631 EP - 8 VL - 18 IS - 4 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18467854&dopt=Abstract ER - TY - JOUR A1 - Tissot JD A1 - Lion N T1 - Clinical proteomics: From diagnosis to therapy. By J. E. Van Eyk and M. J. Dunn (Eds.) JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18481352&dopt=Abstract ER - TY - JOUR A1 - Costa S A1 - Cesareni G T1 - Domains mediate protein-protein interactions and nucleate protein assemblies JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18491061&dopt=Abstract ER - TY - JOUR A1 - Raberg M A1 - Reinecke F A1 - Reichelt R A1 - Malkus U A1 - König S A1 - Pötter M A1 - Fricke WF A1 - Pohlmann A A1 - Voigt B A1 - Hecker M A1 - Friedrich B A1 - Bowien B A1 - Steinbüchel A T1 - Ralstonia eutropha H16 changes flagellation according to nutrient supply and state of poly(3-hydroxybutyrate) accumulation JO - Appl Environ Microbiol Y1 - 2008/05/23 SP - EP - VL - IS - UR - http://dx.doi.org/10.1128/AEM.00440-08 ER - TY - JOUR A1 - Wu K A1 - Katiyar S A1 - Li A A1 - Liu M A1 - Ju X A1 - Popov VM A1 - Jiao X A1 - Lisanti MP A1 - Casola A A1 - Pestell RG T1 - Dachshund inhibits oncogene-induced breast cancer cellular migration and invasion through suppression of interleukin-8 JO - Proc Natl Acad Sci U S A Y1 - 2008 SP - 6924 EP - 9 VL - 105 IS - 19 UR - http://dx.doi.org/10.1073/pnas.0802085105 ER - TY - JOUR A1 - Seeley EH A1 - Oppenheimer SR A1 - Mi D A1 - Chaurand P A1 - Caprioli RM T1 - Enhancement of Protein Sensitivity for MALDI Imaging Mass Spectrometry After Chemical Treatment of Tissue Sections JO - J Am Soc Mass Spectrom Y1 - 2008/04/8 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jasms.2008.03.016 ER - TY - JOUR A1 - Qiang Zhao A1 - Xing-Fang Li A1 - X. Chris Le T1 - Aptamer-Modified Monolithic Capillary Chromatography for Protein Separation and Detection JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3915 EP - 3920 VL - 80 IS - 10 UR - http://dx.doi.org/10.1021/ac702567x ER - TY - JOUR A1 - Manzano C A1 - Abraham Z A1 - López-Torrejón G A1 - Del Pozo JC T1 - Identification of ubiquitinated proteins in Arabidopsis JO - Plant Mol Biol Y1 - 2008/06/6 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s11103-008-9358-9 ER - TY - JOUR A1 - John Mark Reddish A1 - Normand St-Pierre A1 - Andy Nichols A1 - Kari Green-Church A1 - Macdonald Wick T1 - Proteomic analysis of proteins associated with body mass and length in yellow perch, Perca flavescens JO - PROTEOMICS Y1 - 2008 SP - 2333 EP - 2343 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700533 ER - TY - JOUR A1 - Sergej Skvortsov A1 - Bettina Sarg A1 - Herbert Lindner A1 - Peter Lukas A1 - Wolfgang Hilbe A1 - Heinz Zwierzina A1 - Ira Skvortsova T1 - Cetuximab inhibits thymidylate synthase in colorectal cells expressing epidermal growth factor receptor JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 908 EP - 914 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780034 ER - TY - JOUR A1 - Goodison S A1 - Urquidi V T1 - Breast tumor metastasis: analysis via proteomic profiling JO - Expert Rev Proteomics Y1 - 2008 SP - 457 EP - 67 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.457 ER - TY - JOUR A1 - Khoudoli GA A1 - Gillespie PJ A1 - Stewart G A1 - Andersen JS A1 - Swedlow JR A1 - Blow JJ T1 - Temporal Profiling of the Chromatin Proteome Reveals System-wide Responses to Replication Inhibition JO - Curr Biol Y1 - 2008 SP - 838 EP - 43 VL - 18 IS - 11 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18514518&dopt=Abstract ER - TY - JOUR A1 - Sugiyama N A1 - Nakagami H A1 - Mochida K A1 - Daudi A A1 - Tomita M A1 - Shirasu K A1 - Ishihama Y T1 - Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18463617&dopt=Abstract ER - TY - JOUR A1 - Nossov V A1 - Amneus M A1 - Su F A1 - Lang J A1 - Janco JM A1 - Reddy ST A1 - Farias-Eisner R T1 - The early detection of ovarian cancer: from traditional methods to proteomics. Can we really do better than serum CA-125? JO - Am J Obstet Gynecol Y1 - 2008/05/9 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.ajog.2008.04.009 ER - TY - JOUR A1 - Uhlén M T1 - Affinity as a tool in life science JO - Biotechniques Y1 - 2008 SP - 649 EP - 54 VL - 44 IS - 5 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18474040&dopt=Abstract ER - TY - JOUR A1 - Bobby F. Assiddiq A1 - Ambrosius P. L. Snijders A1 - Poh Kuan Chong A1 - Phillip C. Wright A1 - Mark. J. Dickman T1 - Identification and Characterization of Sulfolobus solfataricus P2 Proteome Using Multidimensional Liquid Phase Protein Separations JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2253 EP - 2261 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr7006472 ER - TY - JOUR A1 - Fernanda Zanolli Freitas A1 - Alex Chapeaurouge A1 - Jonas Perales A1 - Maria Célia Bertolini T1 - A systematic approach to identify STRE-binding proteins of the gsn glycogen synthase gene promoter in Neurospora crassa JO - PROTEOMICS Y1 - 2008 SP - 2052 EP - 2061 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700921 ER - TY - JOUR A1 - Mathy G A1 - Sluse FE T1 - Mitochondrial comparative proteomics: Strengths and pitfalls JO - Biochim Biophys Acta Y1 - 2008/05/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.bbabio.2008.04.042 ER - TY - JOUR A1 - Xiao-Xia Xia A1 - Mee-Jung Han A1 - Sang Yup Lee A1 - Jong-Shin Yoo T1 - Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation JO - PROTEOMICS Y1 - 2008 SP - 2089 EP - 2103 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700826 ER - TY - JOUR A1 - Sanchez B A1 - Ruiz L A1 - Reyes-Gavilan CG A1 - Margolles A T1 - Proteomics of stress response in Bifidobacterium JO - Front Biosci Y1 - 2008 SP - 6905 EP - 19 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508704&dopt=Abstract ER - TY - JOUR A1 - Brozkova K A1 - Budinska E A1 - Bouchal P A1 - Hernychova L A1 - Knoflickova D A1 - Valik D A1 - Vyzula R A1 - Vojtesek B A1 - Nenutil R T1 - SELDI-TOF proteomic profiling of breast carcinomas identifies clinicopathologically relevant groups of patients similar to previously defined clusters from cDNA expression JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18510725&dopt=Abstract ER - TY - JOUR A1 - Nguyen MT A1 - Dent CL A1 - Ross GF A1 - Harris N A1 - Manning PB A1 - Mitsnefes MM A1 - Devarajan P T1 - Urinary aprotinin as a predictor of acute kidney injury after cardiac surgery in children receiving aprotinin therapy JO - Pediatr Nephrol Y1 - 2008/05/28 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s00467-008-0827-9 ER - TY - JOUR A1 - Efstathia Kitsou A1 - Sheng Pan A1 - JianPeng Zhang A1 - Min Shi A1 - Aram Zabeti A1 - Dennis W. Dickson A1 - Roger Albin A1 - Marla Gearing A1 - Daniel T. Kashima A1 - Yan Wang A1 - Richard P. Beyer A1 - Yong Zhou A1 - Catherine Pan A1 - W. Michael Caudle A1 - Jing Zhang T1 - Identification of proteins in human substantia nigra JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 776 EP - 782 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200800028 ER - TY - JOUR A1 - Anpan Han A1 - Marc Creus A1 - Gregor Schürmann A1 - Vincent Linder A1 - Thomas R. Ward A1 - Nico F. de Rooij A1 - Urs Staufer T1 - Label-Free Detection of Single Protein Molecules and Protein−Protein Interactions Using Synthetic Nanopores JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4651 EP - 4658 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac7025207 ER - TY - JOUR A1 - Milli A A1 - Cecconi D A1 - Campostrini N A1 - Timperio AM A1 - Zolla L A1 - Righetti SC A1 - Zunino F A1 - Perego P A1 - Benedetti V A1 - Gatti L A1 - Odreman F A1 - Vindigni A A1 - Righetti PG T1 - A proteomic approach for evaluating the cell response to a novel histone deacetylase inhibitor in colon cancer cells JO - Biochim Biophys Acta Y1 - 2008/05/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.bbapap.2008.04.022 ER - TY - JOUR A1 - Messana I A1 - Inzitari R A1 - Fanali C A1 - Cabras T A1 - Castagnola M T1 - Facts and artifacts in proteomics of body fluids. What proteomics of saliva is telling us? JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18491358&dopt=Abstract ER - TY - JOUR A1 - Reinhardt TA A1 - Lippolis JD T1 - Developmental changes in the milk fat globule membrane proteome during the transition from colostrum to milk JO - J Dairy Sci Y1 - 2008 SP - 2307 EP - 18 VL - 91 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18487653&dopt=Abstract ER - TY - JOUR A1 - Veenstra TD A1 - Marcus K T1 - Multidimensional advancement of neuroproteomics JO - Expert Rev Proteomics Y1 - 2008 SP - 149 EP - 51 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.149 ER - TY - JOUR A1 - Jikun Liu A1 - Shuang Yang A1 - Cheng S. Lee A1 - Don L. DeVoe T1 - Polyacrylamide gel plugs enabling 2-D microfluidic protein separations via isoelectric focusing and multiplexed sodium dodecyl sulfate gel electrophoresis JO - ELECTROPHORESIS Y1 - 2008 SP - 2241 EP - 2250 VL - 29 IS - 11 UR - http://dx.doi.org/10.1002/elps.200700608 ER - TY - JOUR A1 - Pan J A1 - Chen HQ A1 - Sun YH A1 - Zhang JH A1 - Luo XY T1 - Comparative Proteomic Analysis of Non-small-cell Lung Cancer and Normal Controls Using Serum Label-Free Quantitative Shotgun Technology JO - Lung Y1 - 2008/05/9 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s00408-008-9093-7 ER - TY - JOUR A1 - Zheying Zhu A1 - Alan R. Boobis A1 - Robert J. Edwards T1 - Identification of estrogen-responsive proteins in MCF-7 human breast cancer cells using label-free quantitative proteomics JO - PROTEOMICS Y1 - 2008 SP - 1987 EP - 2005 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700901 ER - TY - JOUR A1 - Johan Ingvarsson A1 - Christer Wingren A1 - Anders Carlsson A1 - Peter Ellmark A1 - Britta Wahren A1 - Gunnel Engström A1 - Ulrika Harmenberg A1 - Morten Krogh A1 - Carsten Peterson A1 - Carl A. K. Borrebaeck T1 - Detection of pancreatic cancer using antibody microarray-based serum protein profiling JO - PROTEOMICS Y1 - 2008 SP - 2211 EP - 2219 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200701167 ER - TY - JOUR A1 - Sandoval WN A1 - Pham V A1 - Ingle ES A1 - Liu PS A1 - Lill JR T1 - Applications of microwave-assisted proteomics in biotechnology JO - Comb Chem High Throughput Screen Y1 - 2007 SP - 751 EP - 65 VL - 10 IS - 9 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18478957&dopt=Abstract ER - TY - JOUR A1 - Skalnikova H A1 - Vodicka P A1 - Gadher SJ A1 - Kovarova H T1 - Proteomics of neural stem cells JO - Expert Rev Proteomics Y1 - 2008 SP - 175 EP - 86 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.175 ER - TY - JOUR A1 - Fox JW A1 - Serrano SM T1 - Insights into and speculations about snake venom metalloproteinase (SVMP) synthesis, folding and disulfide bond formation and their contribution to venom complexity JO - FEBS J Y1 - 2008 SP - 3016 EP - 30 VL - 275 IS - 12 UR - http://dx.doi.org/10.1111/j.1742-4658.2008.06466.x ER - TY - JOUR A1 - Janosch Hennig A1 - Klaus D. 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Hennig A1 - Maria Sunnerhagen T1 - MTMDAT: Automated analysis and visualization of mass spectrometry data for tertiary and quaternary structure probing of proteins JO - Bioinformatics Y1 - 2008 SP - 1310 EP - 1312; doi:10.1093/bioinformatics/btn116 VL - 24 IS - 10 UR - http://dx.doi.org/bioinformatics/btn116 ER - TY - JOUR A1 - Klawitter J A1 - Rivard CJ A1 - Brown LM A1 - Capasso JM A1 - Almeida NE A1 - Maunsbach AB A1 - Pihakaski-Maunsbach K A1 - Berl T A1 - Leibfritz D A1 - Christians U A1 - Chan L T1 - A Metabonomic and Proteomic Analysis of Changes in IMCD3 Cells Chronically Adapted to Hypertonicity JO - Nephron Physiol Y1 - 2008 SP - p1 EP - p10 VL - 109 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18460876&dopt=Abstract ER - TY - JOUR A1 - Crossett B A1 - Edwards AV A1 - White MY A1 - Cordwell SJ T1 - Statistical analysis of image data provided by two-dimensional gel electrophoresis for discovery proteomics JO - Methods Mol Med Y1 - 2008 SP - 271 EP - 85 VL - 141 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453095&dopt=Abstract ER - TY - JOUR A1 - Takatoshi Nakagawa A1 - Eiji Miyoshi A1 - Takayuki Yakushijin A1 - Naoki Hiramatsu A1 - Takumi Igura A1 - Norio Hayashi A1 - Naoyuki Taniguchi A1 - Akihiro Kondo T1 - Glycomic Analysis of Alpha-Fetoprotein L3 in Hepatoma Cell Lines and Hepatocellular Carcinoma Patients JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2222 EP - 2233 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700841q ER - TY - JOUR A1 - Picciani R A1 - Junk AK A1 - Bhattacharya SK T1 - Technical Brief: a novel strategy for enrichment of trabecular meshwork protease proteome JO - Mol Vis Y1 - 2008 SP - 871 EP - 7 VL - 14 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18490959&dopt=Abstract ER - TY - JOUR A1 - Araujo RP A1 - Petricoin EF A1 - Liotta LA T1 - Critical dependence of blood-borne biomarker concentrations on the half-lives of their carrier proteins JO - J Theor Biol Y1 - 2008/04/18 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jtbi.2008.04.009 ER - TY - JOUR A1 - Guo D A1 - Tan W A1 - Wang F A1 - Lv Z A1 - Hu J A1 - Lv T A1 - Chen Q A1 - Gu X A1 - Wan B A1 - Zhang Z T1 - Proteomic analysis of human articular cartilage: Identification of differentially expressed proteins in knee osteoarthritis JO - Joint Bone Spine Y1 - 2008/05/10 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jbspin.2007.12.003 ER - TY - JOUR A1 - Zhang Y A1 - Wu JF A1 - Zeyer J A1 - Meng B A1 - Liu L A1 - Jiang CY A1 - Liu SQ A1 - Liu SJ T1 - Proteomic and molecular investigation on the physiological adaptation of Comamonas sp. strain CNB-1 growing on 4-chloronitrobenzene JO - Biodegradation Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s10532-008-9199-x ER - TY - JOUR A1 - Isserlin R A1 - Emili A T1 - Interpretation of large-scale quantitative shotgun proteomic profiles for biomarker discovery JO - Curr Opin Mol Ther Y1 - 2008 SP - 231 EP - 42 VL - 10 IS - 3 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18535930&dopt=Abstract ER - TY - JOUR A1 - Mezhoud K A1 - Praseuth D A1 - Francois JC A1 - Bernard C A1 - Edery M T1 - Global quantitative analysis of protein phosphorylation status in fish exposed to microcystin JO - Adv Exp Med Biol Y1 - 2008 SP - 419 EP - 26 VL - 617 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18497065&dopt=Abstract ER - TY - JOUR A1 - Bruno Lomonte A1 - José Escolano A1 - Julián Fernández A1 - Libia Sanz A1 - Yamileth Angulo A1 - José María Gutiérrez A1 - Juan J. Calvete T1 - Snake Venomics and Antivenomics of the Arboreal Neotropical Pitvipers Bothriechis lateralis and Bothriechis schlegelii JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2445 EP - 2457 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr8000139 ER - TY - JOUR A1 - Daniele Vergara A1 - Fernanda Chiriacò A1 - Raffaele Acierno A1 - Michele Maffia T1 - Proteomic map of peripheral blood mononuclear cells JO - PROTEOMICS Y1 - 2008 SP - 2045 EP - 2051 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700726 ER - TY - JOUR A1 - Gerszten RE A1 - Accurso FJ A1 - Bernard GR A1 - Caprioli RM A1 - Klee EW A1 - Klee GG A1 - Kullo IJ A1 - Laguna TA A1 - Roth FP A1 - Sabatine M A1 - Srinivas P A1 - Wang TJ A1 - Ware LB T1 - Challenges in Translating Plasma Proteomics from Bench to Bedside: Update from the NHLBI Clinical Proteomics Programs JO - Am J Physiol Lung Cell Mol Physiol Y1 - 2008/05/2 SP - EP - VL - IS - UR - http://dx.doi.org/10.1152/ajplung.00044.2008 ER - TY - JOUR A1 - Garfin DE T1 - 24th Annual Meeting of the American Electrophoresis Society JO - Expert Rev Proteomics Y1 - 2008 SP - 385 EP - 7 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.385 ER - TY - JOUR A1 - Mohit Raja Jain A1 - Wei-wen Ge A1 - Stella Elkabes A1 - Hong Li T1 - Amyotrophic lateral sclerosis: Protein chaperone dysfunction revealed by proteomic studies of animal models JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 670 EP - 684 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780023 ER - TY - JOUR A1 - Wei Gu A1 - Li-Xia Zou A1 - Peng-Fei Shan A1 - Yi-Ding Chen T1 - Analysis of urinary proteomic patterns for diabetic nephropathy by ProteinChip JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 744 EP - 750 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780083 ER - TY - JOUR A1 - Pang CN A1 - Wilkins MR T1 - Online resources for the molecular contextualization of disease JO - Methods Mol Med Y1 - 2008 SP - 287 EP - 308 VL - 141 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453096&dopt=Abstract ER - TY - JOUR A1 - Portelius E A1 - Zetterberg H A1 - Gobom J A1 - Andreasson U A1 - Blennow K T1 - Targeted proteomics in Alzheimer's disease: focus on amyloid-beta JO - Expert Rev Proteomics Y1 - 2008 SP - 225 EP - 37 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.225 ER - TY - JOUR A1 - Brick K A1 - Pizzi E T1 - A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18485187&dopt=Abstract ER - TY - JOUR A1 - Sedgwick H A1 - Caron F A1 - Monaghan PB A1 - Kolch W A1 - Cooper JM T1 - Lab-on-a-chip technologies for proteomic analysis from isolated cells JO - J R Soc Interface Y1 - 2008/06/5 SP - EP - VL - IS - UR - http://dx.doi.org/10.1098/rsif.2008.0169 ER - TY - JOUR A1 - Mu J A1 - Yang ZS A1 - Xie P T1 - Proteomic analysis of a rat model of depression JO - Expert Rev Proteomics Y1 - 2008 SP - 315 EP - 20 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.315 ER - TY - JOUR A1 - Feng J A1 - Lawson MA A1 - Melamed P T1 - A Proteomic Comparison of Immature and Mature Gonadotrophs in Mice Reveals Novel Differentially Expressed Nuclear Proteins That Regulate Gonadotropin Gene Transcription and RNA Splicing JO - Biol Reprod Y1 - 2008/05/14 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18480465&dopt=Abstract ER - TY - JOUR A1 - Galetskiy D A1 - Susnea I A1 - Reiser V A1 - Adamska I A1 - Przybylski M T1 - Structure and Dynamics of Photosystem II Light-Harvesting Complex Revealed by High-Resolution FTICR Mass Spectrometric Proteome Analysis JO - J Am Soc Mass Spectrom Y1 - 2008/04/4 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.jasms.2008.03.014 ER - TY - JOUR A1 - Xia Q A1 - Liao L A1 - Cheng D A1 - Duong DM A1 - Gearing M A1 - Lah JJ A1 - Levey AI A1 - Peng J T1 - Proteomic identification of novel proteins associated with Lewy bodies JO - Front Biosci Y1 - 2008 SP - 3850 EP - 6 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508479&dopt=Abstract ER - TY - JOUR A1 - Claus Zabel A1 - Joachim Klose T1 - Animal models in human disease JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 635 EP - 637 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200890015 ER - TY - JOUR A1 - Núria Jorba A1 - Silvia Juarez A1 - Eva Torreira A1 - Pablo Gastaminza A1 - Noelia Zamarreño A1 - Juan Pablo Albar A1 - Juan Ortín T1 - Analysis of the interaction of influenza virus polymerase complex with human cell factors JO - PROTEOMICS Y1 - 2008 SP - 2077 EP - 2088 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700508 ER - TY - JOUR A1 - Yin W A1 - Czuchlewski D A1 - Peerschke EI T1 - Development of proteomic signatures of platelet activation using surface-enhanced laser desorption/ionization technology in a clinical setting JO - Am J Clin Pathol Y1 - 2008 SP - 862 EP - 9 VL - 129 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18480001&dopt=Abstract ER - TY - JOUR A1 - Kovac S A1 - Yang X A1 - Huang F A1 - Hixson D A1 - Josic D T1 - Proteomics as a tool for optimization of human plasma protein separation JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18486944&dopt=Abstract ER - TY - JOUR A1 - Shuang Lin A1 - Guoping Yao A1 - Dawei Qi A1 - Yan Li A1 - Chunhui Deng A1 - Pengyuan Yang A1 - Xiangmin Zhang T1 - Fast and Efficient Proteolysis by Microwave-Assisted Protein Digestion Using Trypsin-Immobilized Magnetic Silica Microspheres JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 3655 EP - 3665 VL - 80 IS - 10 UR - http://dx.doi.org/10.1021/ac800023r ER - TY - JOUR A1 - Stephan Kirsch A1 - Mostafa Zarei A1 - Mario Cindrić A1 - Johannes Müthing A1 - Laura Bindila A1 - Jasna Peter-Katalinić T1 - On-Line Nano-HPLC/ESI QTOF MS and Tandem MS for Separation, Detection, and Structural Elucidation of Human Erythrocytes Neutral Glycosphingolipid Mixture JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4711 EP - 4722 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac702175f ER - TY - JOUR A1 - Meinnel T A1 - Giglione C T1 - Protein lipidation meets proteomics JO - Front Biosci Y1 - 2008 SP - 6326 EP - 40 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508663&dopt=Abstract ER - TY - JOUR A1 - Tsujita T A1 - Kang D A1 - Moon MH A1 - Ohno N A1 - Inoue T A1 - Matsumoto M A1 - Kaji Y A1 - Yamaguchi Y T1 - Large-scale identification by shotgun proteomics of proteins expressed in porcine liver and salivary gland JO - Zoolog Sci Y1 - 2008 SP - 129 EP - 38 VL - 25 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18533743&dopt=Abstract ER - TY - JOUR A1 - Roberto Marangoni A1 - Riccardo Chiarini A1 - Giorgio Iannone A1 - Massimiliano Salerno T1 - DigesTip: A new device for a rapid and efficient in-solution protein digestion JO - PROTEOMICS Y1 - 2008 SP - 2165 EP - 2167 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700873 ER - TY - JOUR A1 - Jenny Forshed A1 - Maria Pernemalm A1 - Chuen Seng Tan A1 - Marita Lindberg A1 - Lena Kanter A1 - Yudi Pawitan A1 - Rolf Lewensohn A1 - Leif Stenke A1 - Janne Lehtiö T1 - Proteomic Data Analysis Workflow for Discovery of Candidate Biomarker Peaks Predictive of Clinical Outcome for Patients with Acute Myeloid Leukemia JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2332 EP - 2341 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr070482e ER - TY - JOUR A1 - Ishtiaq Ahmad A1 - Wajahat M. Qazi A1 - Ahmed Khurshid A1 - Munir Ahmad A1 - Daniel C. Hoessli A1 - Iffat Khawaja A1 - M. Iqbal Choudhary A1 - Abdul R. Shakoori A1 - Nasir-ud-Din T1 - MAPRes: Mining association patterns among preferred amino acid residues in the vicinity of amino acids targeted for post-translational modifications JO - PROTEOMICS Y1 - 2008 SP - 1954 EP - 1958 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700657 ER - TY - JOUR A1 - Hirsch J A1 - Niemann CU A1 - Hansen KC A1 - Choi S A1 - Su X A1 - Frank JA A1 - Fang X A1 - Hirose R A1 - Theodore P A1 - Sapru A A1 - Burlingame AL A1 - Matthay MA T1 - Alterations in the proteome of pulmonary alveolar type II cells in the rat after hepatic ischemia-reperfusion JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18496381&dopt=Abstract ER - TY - JOUR A1 - Lundegaard C A1 - Lamberth K A1 - Harndahl M A1 - Buus S A1 - Lund O A1 - Nielsen M T1 - NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11 JO - Nucleic Acids Res Y1 - 2008/05/7 SP - EP - VL - IS - UR - http://dx.doi.org/10.1093/nar/gkn202 ER - TY - JOUR A1 - Poirrier JE A1 - Guillonneau F A1 - Renaut J A1 - Sergeant K A1 - Luxen A A1 - Maquet P A1 - Leprince P T1 - Proteomic changes in rat hippocampus and adrenals following short-term sleep deprivation JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18498662&dopt=Abstract ER - TY - JOUR A1 - Solstad T A1 - Fismen L A1 - Garberg H A1 - Fladmark KE T1 - Identification of a novel phosphorylation site of acyl-CoA binding protein (ACBP) in nodularin-induced apoptotic hepatocytes JO - Exp Cell Res Y1 - 2008 SP - 2141 EP - 2149 VL - 314 IS - 10 UR - http://dx.doi.org/10.1016/j.yexcr.2008.03.014 ER - TY - JOUR A1 - Ai-Lan Cheng A1 - Wei-Guo Huang A1 - Zhu-Chu Chen A1 - Peng-Fei Zhang A1 - Mao-Yu Li A1 - Feng Li A1 - Jian-Ling Li A1 - Cui Li A1 - Hong Yi A1 - Fang Peng A1 - Chao-Jun Duan A1 - Zhi-Qiang Xiao T1 - Identificating Cathepsin D as a Biomarker for Differentiation and Prognosis of Nasopharyngeal Carcinoma by Laser Capture Microdissection and Proteomic Analysis JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2415 EP - 2426 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr7008548 ER - TY - JOUR A1 - Shao-Hsuan Kao A1 - Hin-Kwan Wong A1 - Chia-Ying Chiang A1 - Han-Min Chen T1 - Evaluating the compatibility of three colorimetric protein assays for two-dimensional electrophoresis experiments JO - PROTEOMICS Y1 - 2008 SP - 2178 EP - 2184 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700600 ER - TY - JOUR A1 - Bindu Nanduri A1 - Pratik Shah A1 - Mahalingam Ramkumar A1 - Edward B. Allen A1 - Edwin Swiatlo A1 - Shane C. Burgess A1 - Mark L. Lawrence T1 - Quantitative analysis of Streptococcus pneumoniae TIGR4 response to in vitro iron restriction by 2-D LC ESI MS/MS JO - PROTEOMICS Y1 - 2008 SP - 2104 EP - 2114 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200701048 ER - TY - JOUR A1 - Hu J A1 - Yan C T1 - A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes JO - Comput Biol Chem Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.compbiolchem.2008.03.010 ER - TY - JOUR A1 - Hyoung-Joo Lee A1 - Min-Seok Kwon A1 - Eun-Young Lee A1 - Sang Yun Cho A1 - Young-Ki Paik T1 - Establishment of a PF2D-MS/MS platform for rapid profiling and semiquantitative analysis of membrane protein biomarkers JO - PROTEOMICS Y1 - 2008 SP - 2168 EP - 2177 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200701022 ER - TY - JOUR A1 - Chen S A1 - Chinnaswamy A A1 - Biswas SK A1 - Goryachev AB A1 - Yap CK A1 - Lam KY A1 - Tay CP A1 - Low HS A1 - Pokhilko A A1 - Da-Jun T A1 - Mishra SK T1 - Cell interaction knowledgebase: an online database for innate immune cells, cytokines and chemokines JO - In Silico Biol Y1 - 2007 SP - 569 EP - 74 VL - 7 IS - 6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18467769&dopt=Abstract ER - TY - JOUR A1 - Spurrier B A1 - Honkanen P A1 - Holway A A1 - Kumamoto K A1 - Terashima M A1 - Takenoshita S A1 - Wakabayashi G A1 - Austin J A1 - Nishizuka S T1 - Protein and lysate array technologies in cancer research JO - Biotechnol Adv Y1 - 2008 SP - 361 EP - 9 VL - 26 IS - 4 UR - http://dx.doi.org/10.1016/j.biotechadv.2008.04.002 ER - TY - JOUR A1 - [No authors listed] T1 - Next issue: Mitochondria and ageing JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18481353&dopt=Abstract ER - TY - JOUR A1 - Nanduri B A1 - Lawrence ML A1 - Peddinti DS A1 - Burgess SC T1 - Effects of Subminimum Inhibitory Concentrations of Antibiotics on the Pasteurella multocida Proteome: A Systems Approach JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18464924&dopt=Abstract ER - TY - JOUR A1 - Bovenschen N A1 - de Koning PJ A1 - Quadir R A1 - Broekhuizen R A1 - Damen JM A1 - Froelich CJ A1 - Slijper M A1 - Kummer JA T1 - NK Cell Protease Granzyme M Targets {alpha}-Tubulin and Disorganizes the Microtubule Network JO - J Immunol Y1 - 2008 SP - 8184 EP - 91 VL - 180 IS - 12 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18523284&dopt=Abstract ER - TY - JOUR A1 - Judith Y. M. N. Engwegen A1 - Marieke Alberts A1 - Jaco C. Knol A1 - Connie R. Jimenez A1 - Annekatrien C. T. M. Depla A1 - Henriëtte Tuynman A1 - Henk A. van Heukelem A1 - Pleun Snel A1 - Marianne E. Smits A1 - Annemieke Cats A1 - Jan H. M. Schellens A1 - Jos H. Beijnen T1 - Influence of variations in sample handling on SELDI-TOF MS serum protein profiles for colorectal cancer JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 936 EP - 945 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780068 ER - TY - JOUR A1 - Fowler CB A1 - O'Leary TJ A1 - Mason JT T1 - Modeling formalin fixation and histological processing with ribonuclease A: effects of ethanol dehydration on reversal of formaldehyde cross-links JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18490897&dopt=Abstract ER - TY - JOUR A1 - Lee YH A1 - Chung MC A1 - Lin Q A1 - Boelsterli UA T1 - Troglitazone-induced hepatic mitochondrial proteome expression dynamics in heterozygous Sod2(+/-) mice: Two-stage oxidative injury JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18495193&dopt=Abstract ER - TY - JOUR A1 - Walss-Bass C A1 - Weintraub ST A1 - Hatch J A1 - Mintz J A1 - Chaudhuri AR T1 - Clozapine causes oxidation of proteins involved in energy metabolism: a possible mechanism for antipsychotic-induced metabolic alterations JO - Int J Neuropsychopharmacol Y1 - 2008/05/9 SP - EP - VL - IS - UR - http://dx.doi.org/10.1017/S1461145708008882 ER - TY - JOUR A1 - Saito S A1 - Murayama Y A1 - Pan Y A1 - Taima T A1 - Fujimura T A1 - Murayama K A1 - Sadilek M A1 - Egawa S A1 - Ueno S A1 - Ito A A1 - Ishidoya S A1 - Nakagawa H A1 - Kato M A1 - Satoh M A1 - Endoh M A1 - Arai Y T1 - Haptoglobin-beta chain defined by monoclonal antibody RM2 as a novel serum marker for prostate cancer JO - Int J Cancer Y1 - 2008 SP - 633 EP - 40 VL - 123 IS - 3 UR - http://dx.doi.org/10.1002/ijc.23490 ER - TY - JOUR A1 - Zhang Y A1 - Gao Q A1 - Duan S A1 - He Y A1 - Sun X A1 - Jiang R A1 - Duan Y A1 - Zhong X A1 - Ge J T1 - Upregulation of Copine1 in trabecular meshwork cells of POAG patients: a membrane proteomics approach JO - Mol Vis Y1 - 2008 SP - 1028 EP - 36 VL - 14 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18523666&dopt=Abstract ER - TY - JOUR A1 - Miller CS A1 - Eisenberg D T1 - Using inferred residue contacts to distinguish between correct and incorrect protein models JO - Bioinformatics Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18511466&dopt=Abstract ER - TY - JOUR A1 - Sigdel TK A1 - Lau K A1 - Schilling J A1 - Sarwal M T1 - Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation JO - Clin Transplant Y1 - 2008/05/3 SP - EP - VL - IS - UR - http://dx.doi.org/10.1111/j.1399-0012.2008.00833.x ER - TY - JOUR A1 - Thimon V A1 - Frenette G A1 - Saez F A1 - Thabet M A1 - Sullivan R T1 - Protein composition of human epididymosomes collected during surgical vasectomy reversal: aproteomic and genomic approach JO - Hum Reprod Y1 - 2008/05/14 SP - EP - VL - IS - UR - http://dx.doi.org/10.1093/humrep/den181 ER - TY - JOUR A1 - Yuanyuan Lu A1 - Xin Wang A1 - Zhenxiong Liu A1 - Bin Jin A1 - Dake Chu A1 - Huihong Zhai A1 - Faming Zhang A1 - Kai Li A1 - Gui Ren A1 - Antonio Miranda-Vizuete A1 - Xuegang Guo A1 - Daiming Fan T1 - Identification and distribution of thioredoxin-like 2 as the antigen for the monoclonal antibody MC3 specific to colorectal cancer JO - PROTEOMICS Y1 - 2008 SP - 2220 EP - 2229 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700770 ER - TY - JOUR A1 - Javad Nazarian A1 - Mariarita Santi A1 - Yetrib Hathout A1 - Tobey J. MacDonald T1 - Protein profiling of formalin fixed paraffin embedded tissue: Identification of potential biomarkers for pediatric brainstem glioma JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 915 EP - 924 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780061 ER - TY - JOUR A1 - Wenhai Jin A1 - Anna T. Brown A1 - Anne M. Murphy T1 - Cardiac myofilaments: from proteome to pathophysiology JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 800 EP - 810 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780075 ER - TY - JOUR A1 - Justin Newberg and Robert F. Murphy T1 - A Framework for the Automated Analysis of Subcellular Patterns in Human Protein Atlas Images JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2300 EP - 2308 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr7007626 ER - TY - JOUR A1 - Cheon MS A1 - Suh JK A1 - Kim MJ A1 - Kim SH A1 - Lee K T1 - Identification of differentially expressed proteins in the heart of translationally controlled tumor protein over-expressing transgenic mice JO - Biomed Chromatogr Y1 - 2008/05/27 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/bmc.1029 ER - TY - JOUR A1 - Annette Dreisbach A1 - Andreas Otto A1 - Dörte Becher A1 - Elke Hammer A1 - Alexander Teumer A1 - Joost W. Gouw A1 - Michael Hecker A1 - Uwe Völker T1 - Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques JO - PROTEOMICS Y1 - 2008 SP - 2062 EP - 2076 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200701081 ER - TY - JOUR A1 - Kudva A1 - Indira T.; John A1 - Manohar T1 - Proteomics-Based Expression Library Screening (PELS): A Functional Proteomics Tool for Rapid Discovery of Immunogenic Pathogen-Specific Markers of Host Infection JO - Current Proteomics Y1 - 2008 SP - 1 EP - 9 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00001 ER - TY - JOUR A1 - Lion N A1 - Tissot JD T1 - Application of proteomics to hematology: the revolution is starting JO - Expert Rev Proteomics Y1 - 2008 SP - 375 EP - 9 VL - 5 IS - 3 UR - http://dx.doi.org/10.1586/14789450.5.3.375 ER - TY - JOUR A1 - Felix Cleemann and Peter Karuso T1 - Fluorescence Anisotropy Assay for the Traceless Kinetic Analysis of Protein Digestion JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4170 EP - 4174 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac7025783 ER - TY - JOUR A1 - Lobley AE A1 - Nugent T A1 - Orengo CA A1 - Jones DT T1 - FFPred: an integrated feature-based function prediction server for vertebrate proteomes JO - Nucleic Acids Res Y1 - 2008/05/7 SP - EP - VL - IS - UR - http://dx.doi.org/10.1093/nar/gkn193 ER - TY - JOUR A1 - Carlos Priminho Pirovani A1 - Heliana Argôlo Santos Carvalho A1 - Regina Cele Reboucas Machado A1 - Dayane Santos Gomes A1 - Fátima Cerqueira Alvim A1 - Alan William Vilela Pomella A1 - Karina Peres Gramacho A1 - Júlio Cézar de Mattos Cascardo A1 - Gonçalo Amarante Guimarães Pereira A1 - Fa T1 - Protein extraction for proteome analysis from cacao leaves and meristems, organs infected by Moniliophthora perniciosa, the causal agent of the witches' broom disease JO - ELECTROPHORESIS Y1 - 2008 SP - 2391 EP - 2401 VL - 29 IS - 11 UR - http://dx.doi.org/10.1002/elps.200700743 ER - TY - JOUR A1 - Mélanie Delannoy A1 - Georges Alves A1 - Didier Vertommen A1 - Julian Ma A1 - Marc Boutry A1 - Catherine Navarre T1 - Identification of peptidases in Nicotiana tabacum leaf intercellular fluid JO - PROTEOMICS Y1 - 2008 SP - 2285 EP - 2298 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700507 ER - TY - JOUR A1 - Dong M A1 - Ding G A1 - Zhou J A1 - Wang H A1 - Zhao Y A1 - Huang H T1 - The Effect of Trophoblasts on T Lymphocytes: Possible Regulatory Effector Molecules - A Proteomic Analysis JO - Cell Physiol Biochem Y1 - 2008 SP - 463 EP - 472 VL - 21 IS - 5-6 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453754&dopt=Abstract ER - TY - JOUR A1 - Li Z A1 - Barajas D A1 - Panavas T A1 - Herbst DA A1 - Nagy PD T1 - Cdc34p ubiquitin-conjugating enzyme is a component of the tombusvirus replicase complex and ubiquitinates p33 replication protein JO - J Virol Y1 - 2008/05/7 SP - EP - VL - IS - UR - http://dx.doi.org/10.1128/JVI.00702-08 ER - TY - JOUR A1 - Hernández-Torres F A1 - Pedrajas JR A1 - Aránega AE A1 - Navarro F T1 - Expression in bacteria of small and specific protein domains of two transcription factor isoforms, purification and monospecific polyclonal antibodies generation, by a two-step affinity chromatography procedure JO - Protein Expr Purif Y1 - 2008/03/28 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.pep.2008.03.015 ER - TY - JOUR A1 - Karlheinz Mann T1 - Proteomic analysis of the chicken egg vitelline membrane JO - PROTEOMICS Y1 - 2008 SP - 2322 EP - 2332 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200800032 ER - TY - JOUR A1 - Jun Zhang A1 - David A. Liem A1 - Michael Mueller A1 - Yueju Wang A1 - Chenggong Zong A1 - Ning Deng A1 - Thomas M. Vondriska A1 - Paavo Korge A1 - Oliver Drews A1 - W. Robb MacLellan A1 - Henry Honda A1 - James N. Weiss A1 - Rolf Apweiler A1 - Peipei Ping T1 - Altered Proteome Biology of Cardiac Mitochondria Under Stress Conditions JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2204 EP - 2214 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr070371f ER - TY - JOUR A1 - Arthur JW T1 - Identification and characterization of microbial proteins using peptide mass fingerprinting strategies JO - Methods Mol Med Y1 - 2008 SP - 257 EP - 70 VL - 141 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18453094&dopt=Abstract ER - TY - JOUR A1 - Kawai A A1 - Kondo T A1 - Suehara Y A1 - Kikuta K A1 - Hirohashi S T1 - Global Protein-expression Analysis of Bone and Soft Tissue Sarcomas JO - Clin Orthop Relat Res Y1 - 2008/06/6 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s11999-008-0330-4 ER - TY - JOUR A1 - C. Logan Mackay A1 - Bernard Ramsahoye A1 - Karl Burgess A1 - Ken Cook A1 - Stefan Weidt A1 - James Creanor A1 - David Harrison A1 - Pat Langridge-Smith A1 - Ted Hupp A1 - Larry Hayward T1 - Sensitive, Specific, and Quantitative FTICR Mass Spectrometry of Combinatorial Post-Translational Modifications in Intact Histone H4 JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4147 EP - 4153 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac702452d ER - TY - JOUR A1 - Lefranc MP T1 - IMGT((R)), the International ImMunoGeneTics Information System((R) )for Immunoinformatics : Methods for Querying IMGT((R)) Databases, Tools, and Web Resources in the Context of Immunoinformatics JO - Mol Biotechnol Y1 - 2008/05/8 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s12033-008-9062-7 ER - TY - JOUR A1 - Lorna M. Cryan A1 - Colm O'Brien T1 - Proteomics as a research tool in clinical and experimental ophthalmology JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 762 EP - 775 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780094 ER - TY - JOUR A1 - Nikki P. Y. Lee A1 - Kar-wai Leung A1 - Nicole Cheung A1 - Brian Y. Lam A1 - Michelle Z. Xu A1 - Pak C. Sham A1 - George K. Lau A1 - Ronnie T. P. Poon A1 - Sheung Tat Fan A1 - John M. Luk T1 - Comparative proteomic analysis of mouse livers from embryo to adult reveals an association with progression of hepatocellular carcinoma JO - PROTEOMICS Y1 - 2008 SP - 2136 EP - 2149 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700590 ER - TY - JOUR A1 - Schilling O A1 - Overall CM T1 - Proteome-derived, database-searchable peptide libraries for identifying protease cleavage sites JO - Nat Biotechnol Y1 - 2008 SP - 685 EP - 94 VL - 26 IS - 6 UR - http://dx.doi.org/10.1038/nbt1408 ER - TY - JOUR A1 - WiÅ›niewski JR A1 - Zougman A A1 - Krüger S A1 - Ziółkowski P A1 - PudeÅ‚ko M A1 - BÄ™benek M A1 - Mann M T1 - Constitutive and dynamic phosphorylation and acetylation sites on NUCKS, a hypermodified nuclear protein, studied by quantitative proteomics JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18491381&dopt=Abstract ER - TY - JOUR A1 - Jayanthi S A1 - Buie S A1 - Moore S A1 - Herning RI A1 - Better W A1 - Wilson NM A1 - Contoreggi C A1 - Cadet JL T1 - Heavy marijuana users show increased serum apolipoprotein C-III levels: evidence from proteomic analyses JO - Mol Psychiatry Y1 - 2008/05/13 SP - EP - VL - IS - UR - http://dx.doi.org/10.1038/mp.2008.50 ER - TY - JOUR A1 - Baukje de Roos A1 - Anouk Geelen A1 - Karen Ross A1 - Garry Rucklidge A1 - Martin Reid A1 - Gary Duncan A1 - Muriel Caslake A1 - Graham Horgan A1 - Ingeborg A. Brouwer T1 - Identification of potential serum biomarkers of inflammation and lipid modulation that are altered by fish oil supplementation in healthy volunteers JO - PROTEOMICS Y1 - 2008 SP - 1965 EP - 1974 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700457 ER - TY - JOUR A1 - Allen Bosley A1 - Heather N. Marshall A1 - Yunden Badralmaa A1 - Ven Natarajan T1 - A method of HIV-1 inactivation compatible with antibody-based depletion of abundant proteins from plasma JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 904 EP - 907 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780086 ER - TY - JOUR A1 - de Souza DM A1 - Oliveira BM A1 - Castro-Dias E A1 - Winck FV A1 - Horiuchi RS A1 - Baldasso PA A1 - Caetano HT A1 - Pires NK A1 - Marangoni S A1 - Novello JC T1 - The untiring search for the most complete proteome representation: reviewing the methods JO - Brief Funct Genomic Proteomic Y1 - 2008/05/29 SP - EP - VL - IS - UR - http://dx.doi.org/10.1093/bfgp/eln023 ER - TY - JOUR A1 - Butler GS A1 - Dean RA A1 - Tam EM A1 - Overall CM T1 - Pharmacoproteomics of a metalloproteinase hydroxamate inhibitor in breast cancer cells: Dynamics of matrix metalloproteinase-14 (MT1-MMP) mediated membrane protein shedding JO - Mol Cell Biol Y1 - 2008/05/27 SP - EP - VL - IS - UR - http://dx.doi.org/10.1128/MCB.01775-07 ER - TY - JOUR A1 - Chun-Wei Hsu A1 - Hsueh-Fen Juan A1 - Hsuan-Cheng Huang T1 - Characterization of microRNA-regulated protein-protein interaction network JO - PROTEOMICS Y1 - 2008 SP - 1975 EP - 1979 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200701004 ER - TY - JOUR A1 - Prieto DA A1 - Ye X A1 - Veenstra TD T1 - Proteomic analysis of traumatic brain injury: the search for biomarkers JO - Expert Rev Proteomics Y1 - 2008 SP - 283 EP - 91 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.283 ER - TY - JOUR A1 - Sarma AD A1 - Oehrle NW A1 - Emerich DW T1 - Plant protein isolation and stabilization for enhanced resolution of two-dimensional polyacrylamide gel electrophoresis JO - Anal Biochem Y1 - 2008/05/8 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.ab.2008.04.047 ER - TY - JOUR A1 - Raina N. 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Doncel A1 - Melissa Donaghay A1 - Jean-Charles Grivel A1 - Esmeralda Guzman A1 - Mad T1 - Biological and Technical Variables Affecting Immunoassay Recovery of Cytokines from Human Serum and Simulated Vaginal Fluid: A Multicenter Study JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4741 EP - 4751 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac702628q ER - TY - JOUR A1 - Paolo Conrotto A1 - Ulf Hellman T1 - Lys Tag: an easy and robust chemical modification for improved de novo sequencing with a matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometer JO - Rapid Communications in Mass Spectrometry Y1 - 2008 SP - 1823 EP - 1833 VL - 22 IS - 12 UR - http://dx.doi.org/10.1002/rcm.3555 ER - TY - JOUR A1 - Barba de la Rosa AP A1 - Lugo-Melchor OY A1 - Briones-Cerecero EP A1 - Chagolla-López A A1 - De León-Rodríguez A A1 - Santos L A1 - Vázquez-Ortiz G A1 - Salcedo M T1 - Analysis of human serum from women affected by cervical lesions JO - J Exp Ther Oncol Y1 - 2008 SP - 65 EP - 72 VL - 7 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18472643&dopt=Abstract ER - TY - JOUR A1 - Ryan K A1 - Bauer DL T1 - Finishing touches: Post-translational modification of protein factors involved in mammalian pre-mRNA 3' end formation JO - Int J Biochem Cell Biol Y1 - 2008/04/1 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.biocel.2008.03.016 ER - TY - JOUR A1 - Hutchinson TH A1 - Mahshid Y A1 - Jönsson R A1 - Björklund C A1 - Kenne K T1 - Proteomic analysis of phospholipidosis in citalopram treated U937 cells - Support for the cholesterol biosynthesis hypothesis JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18499393&dopt=Abstract ER - TY - JOUR A1 - John H. Beattie A1 - Margaret-Jane Gordon A1 - Garry J. Rucklidge A1 - Martin D. Reid A1 - Gary J. Duncan A1 - Graham W. Horgan A1 - Young-Eun Cho A1 - In-Sook Kwun T1 - Aorta protein networks in marginal and acute zinc deficiency JO - PROTEOMICS Y1 - 2008 SP - 2126 EP - 2135 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700784 ER - TY - JOUR A1 - Ou J A1 - Walczysko P A1 - Kucerova R A1 - Rajnicek A A1 - McCaig C A1 - Zhao M A1 - Collinson J T1 - Chronic wound state exacerbated by oxidative stress in Pax6(+/-) aniridia-related keratopathy JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18491289&dopt=Abstract ER - TY - JOUR A1 - Leesa J. Deterding A1 - Maureen K. Bunger A1 - Geoffrey C. Banks A1 - Kenneth B. Tomer A1 - Trevor K. Archer T1 - Global Changes in and Characterization of Specific Sites of Phosphorylation in Mouse and Human Histone H1 Isoforms upon CDK Inhibitor Treatment Using Mass Spectrometry JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2368 EP - 2379 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700790a ER - TY - JOUR A1 - Michelle Mintz A1 - Adeline Vanderver A1 - Kristy J. Brown A1 - Joseph Lin A1 - Zuyi Wang A1 - Christine Kaneski A1 - Raphael Schiffmann A1 - Kanneboyina Nagaraju A1 - Eric P. Hoffman A1 - Yetrib Hathout T1 - Time Series Proteome Profiling To Study Endoplasmic Reticulum Stress Response JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2435 EP - 2444 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr700842m ER - TY - JOUR A1 - Titz B A1 - Rajagopala SV A1 - Goll J A1 - Häuser R A1 - McKevitt MT A1 - Palzkill T A1 - Uetz P T1 - The binary protein interactome of Treponema pallidum--the syphilis spirochete JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18509523&dopt=Abstract ER - TY - JOUR A1 - Ye H A1 - Wang A A1 - Lee BS A1 - Yu T A1 - Sheng S A1 - Peng T A1 - Hu S A1 - Crowe DL A1 - Zhou X T1 - Proteomic Based Identification of Manganese Superoxide Dismutase 2 (SOD2) as a Metastasis Marker for Oral Squamous Cell Carcinoma JO - Cancer Genomics Proteomics Y1 - 2008 SP - 85 EP - 94 VL - 5 IS - 2 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18460737&dopt=Abstract ER - TY - JOUR A1 - Lorenzo Fulgentini A1 - Roberto Marangoni A1 - Giuliano Colombetti T1 - Optimizing soluble protein extraction and two-dimensional polyacrylamide gel electrophoresis quality for extremophile ciliates JO - ELECTROPHORESIS Y1 - 2008 SP - 2411 EP - 2412 VL - 29 IS - 11 UR - http://dx.doi.org/10.1002/elps.200700838 ER - TY - JOUR A1 - Liu A1 - Wei; Wang A1 - Jin-Ye T1 - Protein Modification by Peroxidative Products of Polyunsaturated Fatty Acids JO - Current Proteomics Y1 - 2008 SP - 62 EP - 72 VL - 5 IS - 1 UR - http://dx.doi.org/http://www.ingentaconnect.com/content/ben/cp/2008/00000005/00000001/art00006 ER - TY - JOUR A1 - Lu Q A1 - Murugesan N A1 - Macdonald JA A1 - Wu SL A1 - Pachter JS A1 - Hancock WS T1 - Analysis of mouse brain microvascular endothelium using immuno-laser capture microdissection coupled to a hybrid linear ion trap with Fourier transform-mass spectrometry proteomics platform JO - Electrophoresis Y1 - 2008/05/16 SP - EP - VL - IS - UR - http://dx.doi.org/10.1002/elps.200700936 ER - TY - JOUR A1 - D'Ambrosio C A1 - Mandrich L A1 - Rossi M A1 - Scaloni A A1 - Manco G T1 - A Proteomic Approach to Study Escherichia coli. 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Biggs T1 - A cross-species quantitative proteomic study of salt adaptation in a halotolerant environmental isolate using 15N metabolic labelling JO - PROTEOMICS Y1 - 2008 SP - 2266 EP - 2284 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200700398 ER - TY - JOUR A1 - Ramachandran N A1 - Raphael JV A1 - Hainsworth E A1 - Demirkan G A1 - Fuentes MG A1 - Rolfs A A1 - Hu Y A1 - Labaer J T1 - Next-generation high-density self-assembling functional protein arrays JO - Nat Methods Y1 - 2008 SP - 535 EP - 8 VL - 5 IS - 6 UR - http://dx.doi.org/10.1038/nmeth.1210 ER - TY - JOUR A1 - Zhang Q A1 - Menon R A1 - Deutsch EW A1 - Pitteri SJ A1 - Faca VM A1 - Wang H A1 - Newcomb LF A1 - Depinho RA A1 - Bardeesy N A1 - Dinulescu D A1 - Hung KE A1 - Kucherlapati R A1 - Jacks T A1 - Politi K A1 - Aebersold R A1 - Omenn GS A1 - States DJ A1 - Hanash SM T1 - A mouse plasma PeptideAtlas as a resource for disease proteomics JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18522751&dopt=Abstract ER - TY - JOUR A1 - Chao Yuan A1 - R. John Solaro T1 - Myofilament proteins: From cardiac disorders to proteomic changes JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 788 EP - 799 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780076 ER - TY - JOUR A1 - Hiroki Kuyama A1 - Kazuhiro Sonomura A1 - Keisuke Shima A1 - Osamu Nishimura A1 - Susumu Tsunasawa T1 - An improved method for de novo sequencing of arginine-containing, N?-tris(2,4,6-trimethoxyphenyl)phosphonium-acetylated peptides JO - Rapid Communications in Mass Spectrometry Y1 - 2008 SP - 2063 EP - 2072 VL - 22 IS - 13 UR - http://dx.doi.org/10.1002/rcm.3587 ER - TY - JOUR A1 - Burniston JG T1 - Changes in the rat skeletal muscle proteome induced by moderate-intensity endurance exercise JO - Biochim Biophys Acta Y1 - 2008/04/24 SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18482594&dopt=Abstract ER - TY - JOUR A1 - Matsumoto H A1 - Matsumoto I T1 - Alcoholism: protein expression profiles in a human hippocampal model JO - Expert Rev Proteomics Y1 - 2008 SP - 321 EP - 31 VL - 5 IS - 2 UR - http://dx.doi.org/10.1586/14789450.5.2.321 ER - TY - JOUR A1 - Tyler CD A1 - Lichti CF A1 - Diekman AB A1 - Foley SL T1 - Evaluation of differentially expressed proteins following serum exposure in avian pathogenic Escherichia coli JO - Avian Dis Y1 - 2008 SP - 23 EP - 7 VL - 52 IS - 1 UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18459291&dopt=Abstract ER - TY - JOUR A1 - W. Robb MacLellan A1 - Yibin Wang A1 - Thomas M. Vondriska A1 - James N. Weiss A1 - Peipei Ping T1 - Proteomic insights into cardiac cell death and survival JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 837 EP - 844 VL - 2 IS - 6 UR - http://dx.doi.org/10.1002/prca.200780121 ER - TY - JOUR A1 - Caroline Solazzo A1 - William W. Fitzhugh A1 - Christian Rolando A1 - Caroline Tokarski T1 - Identification of Protein Remains in Archaeological Potsherds by Proteomics JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4590 EP - 4597 VL - 80 IS - 12 UR - http://dx.doi.org/10.1021/ac800515v ER - TY - JOUR A1 - Michael Hamacher A1 - Martin Eisenacher A1 - Florian Tribl A1 - Christian Stephan A1 - Katrin Marcus A1 - Tanja Hardt A1 - Jens Wiltfang A1 - Lennart Martens A1 - Dominic Desiderio A1 - Howard Gutstein A1 - Young Mok Park A1 - Helmut E. Meyer T1 - The HUPO Brain Proteome Project Wish List - Summary of the 9th HUPO BPP Workshop 9-10 January 2008, Barbados JO - PROTEOMICS Y1 - 2008 SP - 2160 EP - 2164 VL - 8 IS - 11 UR - http://dx.doi.org/10.1002/pmic.200800090 ER - TY - JOUR A1 - Kirchner L A1 - Chen WQ A1 - Afjehi-Sadat L A1 - Viidik A A1 - Skalicky M A1 - Höger H A1 - Lubec G T1 - Hippocampal metabolic proteins are modulated in voluntary and treadmill exercise rats JO - Exp Neurol Y1 - 2008 SP - 145 EP - 51 VL - 212 IS - 1 UR - http://dx.doi.org/10.1016/j.expneurol.2008.03.014 ER - TY - JOUR A1 - Delbosc S A1 - Haloui M A1 - Louedec L A1 - Dupuis M A1 - Cubizolles M A1 - Podust VN A1 - Fung ET A1 - Michel JB A1 - Meilhac O T1 - Proteomic analysis permits the identification of new biomarkers of arterial wall remodeling in hypertension JO - Y1 - SP - EP - VL - IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18496584&dopt=Abstract ER - TY - JOUR A1 - Moore JC A1 - Fu J A1 - Chan YC A1 - Lin D A1 - Tran H A1 - Tse HF A1 - Li RA T1 - Distinct cardiogenic preferences of two human embryonic stem cell (hESC) lines are imprinted in their proteomes in the pluripotent state JO - Biochem Biophys Res Commun Y1 - 2008/05/23 SP - EP - VL - IS - UR - http://dx.doi.org/10.1016/j.bbrc.2008.05.076 ER - TY - JOUR A1 - Matthew J. 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Taylor A1 - Hai Yu A1 - Xi Chen A1 - Quan Cheng T1 - Surface Plasmon Resonance Study of Protein−Carbohydrate Interactions Using Biotinylated Sialosides JO - ANALYTICAL CHEMISTRY Y1 - 2008 SP - 4007 EP - 4013 VL - 80 IS - 11 UR - http://dx.doi.org/10.1021/ac702566e ER - TY - JOUR A1 - Anthony Fardet A1 - Rafael Llorach A1 - Jean-François Martin A1 - Catherine Besson A1 - Bernard Lyan A1 - Estelle Pujos-Guillot A1 - Augustin Scalbert T1 - A Liquid Chromatography−Quadrupole Time-of-Flight (LC−QTOF)-based Metabolomic Approach Reveals New Metabolic Effects of Catechin in Rats Fed High-Fat Diets JO - JOURNAL OF PROTEOME RESEARCH Y1 - 2008 SP - 2388 EP - 2398 VL - 7 IS - 06 UR - http://dx.doi.org/10.1021/pr800034h ER - TY - JOUR A1 - Tong JC A1 - Tammi MT T1 - Methods and protocols for the assessment of protein allergenicity and cross-reactivity JO - Front Biosci Y1 - 2008 SP - 4882 EP - 8 VL - 13 IS - UR - http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=18508553&dopt=Abstract ER - TY - JOUR A1 - Aiping Tong A1 - Lihong Wu A1 - Qingsong Lin A1 - Quek Choon Lau A1 - Xia Zhao A1 - Jiong Li A1 - Ping Chen A1 - Lijuan Chen A1 - Hong Tang A1 - Canhua Huang A1 - Yu-quan Wei T1 - Proteomic analysis of cellular protein alterations using a hepatitis B virus-producing cellular model JO - PROTEOMICS Y1 - 2008 SP - 2012 EP - 2023 VL - 8 IS - 10 UR - http://dx.doi.org/10.1002/pmic.200700849 ER - TY - JOUR A1 - Kathrin Grundmann A1 - Jeannette Hübener A1 - Karina Häbig A1 - Bettina Reischmann A1 - Sven Poths A1 - Till-Karsten Hauser A1 - Janine Magg A1 - Olaf Riess A1 - Michael Bonin A1 - Huu Phuc Nguyen T1 - Gene expression changes in a transgenic mouse model overexpressing human wildtype and mutant torsinA JO - PROTEOMICS - CLINICAL APPLICATIONS Y1 - 2008 SP - 720 EP - 736 VL - 2 IS - 5 UR - http://dx.doi.org/10.1002/prca.200780053 ER - TY - JOUR A1 - Nakachi M A1 - Matsumoto M A1 - Terry PM A1 - Cerny RL A1 - Moriyama H T1 - Identification of Guanylate Cyclases and Related Signaling Proteins in Sperm Tail from Sea Stars by Mass Spectrometry JO - Mar Biotechnol (NY) Y1 - 2008/05/7 SP - EP - VL - IS - UR - http://dx.doi.org/10.1007/s10126-008-9096-7 ER -