SPS'08: Applied Proteomics - Tips & Tricks

Applied Proteomics - Tips & Tricks

SPS Workshop on Quantitative methods in proteomics

December, 4th 2008 from 9.00 to 12.30
in the Hotel Ramada Encore Geneva, 12 Route des Jeunes, Geneva

This closing event of the SPS'08 Training initiative will be held during the EBAC'08 convention "Bridging Public and Private Research On Bioinformatics and Proteomics"

Final program

9h00: Niels Lion (Service Régional Vaudois de Transfusion Sanguine, Lausanne)
        Two-dimensional gel electrophoresis of raw, hemoglobin-depleted, and
        concentration-linearized red blood cell proteins, followed by protein
        identification.

9h20: Hans Voshol (Novartis Institutes for Biomedical Research, Basel)
        Reproducibility of 2D PAGE

9h40: Loic Dayon (Biomedical Proteomics Research Group, University of Geneva)
        Tandem Mass Tags and OFFGEL electrophoresis: two key technologies for
        MS/MS-based quantitative proteomics

10h00: Willy Bienvenut (Beatson Institute for Cancer Research, Glasgow, Scottland)
	SILAC: some advantages and drawbacks on one of the most famous relative
	quantitation approach  

10h20: coffee break

10h40: Michael Affolter (Nestlé Research Center, Lausanne)
        ANIBAL - Stable-isotope-based quantitative proteomics

11h00: Erich Brunner (Center for Model Organism Proteomes, Zurich)
        SRM-based Quantitative Proteomics on the Wnt Signaling Pathway

11h20: Vinzenz Lange (Institute of Molecular Systems Biology, Zurich)
        Quantification of biomarkers in plasma using SRM

12h00-12h30: 8th General Council meeting of the SPS (Agenda)

The Swiss Proteomics Society is proud to announce the second edition of its successful training initiative launched for the first time in 2006.

Participants will have the choice to attend to short applied courses among the various offers from specialised hosting laboratories spread throughout Switzerland, from September through November 2008. The goal will be to offer intensive experimental training in specific Proteomics domains over a few days. All training participants and organisers will then meet in a joint debriefing workshop to be held in Geneva on December 4, 2008, in parallel to the EBAC'08 convention "Bridging Public and Private Research On Bioinformatics and Proteomics". The workshop will be the occasion to present the summary of the training courses and to share impressions and good practices learned during the training experience with other students and interested scientists.

Participants can be students with limited experience, but also senior scientists willing to learn something new. The registrations are open to both academic and industrial participants.

Training around: [Geneva] [Lausanne] [Zurich]

Around Geneva
Bioinformatics for proteome analysis, Swiss Institute of Bioinformatics, Geneva. The 3 parts can be attended individually or in various combinations. Keywords: Bioinformatics, mass spectrometry, two-dimensional gel electrophoresis, protein identification, UniProtKB Level: Basics experience in proteomics required Part I - Understanding protein sequence databases for using them in the most efficient way, Swiss-Prot Group Part II - Bioinformatics analysis of mass spectrometry data, Proteome Informatics Group Part III - Publishing 2-DE data, Proteome Informatics Group --course is waiting for enough participants to be re-scheduled, please pre-register if you are interested-- Tandem Mass Tags and OFFGEL electrophoresis: two key technologies for MS/MS-based quantitative proteomics, Biomedical Proteomics Research Group, Geneva University Keywords: Bioinformatics, Tandem Mass Tags, OFFGEL electrophoresis Level: Basics experience in proteomics required *--Note! course has been rescheduled from 3 to 6 November, 2008 --*

Around Geneva

Bioinformatics for proteome analysis, Swiss Institute of Bioinformatics, Geneva. The 3 parts can be attended individually or in various combinations.
Keywords: Bioinformatics, mass spectrometry, two-dimensional gel electrophoresis, protein identification, UniProtKB
Level: Basics experience in proteomics required

Part I - Understanding protein sequence databases for using them in the most efficient way, Swiss-Prot Group
Part II - Bioinformatics analysis of mass spectrometry data, Proteome Informatics Group
Part III - Publishing 2-DE data, Proteome Informatics Group

--course is waiting for enough participants to be re-scheduled, please pre-register if you are interested--

Tandem Mass Tags and OFFGEL electrophoresis: two key technologies for MS/MS-based quantitative proteomics, Biomedical Proteomics Research Group, Geneva University
Keywords: Bioinformatics, Tandem Mass Tags, OFFGEL electrophoresis
Level: Basics experience in proteomics required
--Note! course has been rescheduled from 3 to 6 November, 2008 --

[Back to TOP]

Around Lausanne
Two-dimensional gel electrophoresis of raw and concentration-linearized samples followed by protein identification, SRTS-VD and PAF, Lausanne Keywords: two-dimensional gel electrophoresis, dynamic range, ProteoMiner, protein identification Level: Beginners *--Note! course has been scheduled from 25 to 28 November, 2008 --*

[Back to TOP]

Around Zurich
Introduction to Proteome Analysis - Samples, Mass Specs, and Data Analysis, Functional Genomics Center Zürich, ETHZ Keywords: Mass spectrometry, Bioinformatics, protein identification Level: Beginners --course is waiting for enough participants to be scheduled, please pre-register if you are interested-- Analysis of High-Throughput Mass Spectrometry Data, Institute of Molecular Systems Biology (IMSB), ETHZ Keywords: Bioinformatics, protein identification, TPP Level: Experience with proteomics required --course is waiting for enough participants to be scheduled, please pre-register if you are interested-- Analysis of Post Translational Modifications/Phosphorylations, Institute of Molecular Systems Biology (IMSB), ETHZ Keywords: Mass spectrometry, Bioinformatics, post-translational modifications, protein identification Level: Basics experience in proteomics required --course is waiting for enough participants to be scheduled, please pre-register if you are interested--

Around Zurich

Introduction to Proteome Analysis - Samples, Mass Specs, and Data Analysis, Functional Genomics Center Zürich, ETHZ
Keywords: Mass spectrometry, Bioinformatics, protein identification
Level: Beginners
--course is waiting for enough participants to be scheduled, please pre-register if you are interested--

Analysis of High-Throughput Mass Spectrometry Data, Institute of Molecular Systems Biology (IMSB), ETHZ
Keywords: Bioinformatics, protein identification, TPP
Level: Experience with proteomics required
--course is waiting for enough participants to be scheduled, please pre-register if you are interested--

Analysis of Post Translational Modifications/Phosphorylations, Institute of Molecular Systems Biology (IMSB), ETHZ
Keywords: Mass spectrometry, Bioinformatics, post-translational modifications, protein identification
Level: Basics experience in proteomics required
--course is waiting for enough participants to be scheduled, please pre-register if you are interested--

[Back to TOP]

[Home]
[About the Society] [Statutes] [Membership] [Committee]
[Career & Employment] [Links]
[News & Events] [SPS' Digest] [Jokeomics]
[Support & Award]

SPS'08: Applied Proteomics - Tips & Tricks

Applied Proteomics - Tips & Tricks

SPS Workshop on Quantitative methods in proteomics

December, 4th 2008 from 9.00 to 12.30 in the Hotel Ramada Encore Geneva, 12 Route des Jeunes, Geneva

Final program

Training around: [Geneva] [Lausanne] [Zurich]

[Back to TOP]

[Back to TOP]

[Back to TOP]

[Home] [About the Society] [Statutes] [Membership] [Committee] [Career & Employment] [Links] [News & Events] [SPS' Digest] [Jokeomics] [Support & Award]

December, 4th 2008 from 9.00 to 12.30
in the Hotel Ramada Encore Geneva, 12 Route des Jeunes, Geneva

[Home]
[About the Society] [Statutes] [Membership] [Committee]
[Career & Employment] [Links]
[News & Events] [SPS' Digest] [Jokeomics]
[Support & Award]